Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_3, section s45.

Sample reads: 96,256. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4176.16 43385.96 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Nd1 ENSMUSG00000064341 4015.14 41713.13 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
3. mt-Nd4 ENSMUSG00000064363 3895.67 40471.96 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Atp6 ENSMUSG00000064357 3781.40 39284.82 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Rnr2 ENSMUSG00000064339 3266.13 33931.70 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
6. mt-Co2 ENSMUSG00000064354 2521.28 26193.48 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Co1 ENSMUSG00000064351 2180.54 22653.54 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. Ptma ENSMUSG00000026238 1549.96 16102.47 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
9. mt-Co3 ENSMUSG00000064358 1547.88 16080.86 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
10. mt-Nd3 ENSMUSG00000064360 990.02 10285.28 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. mt-Nd2 ENSMUSG00000064345 982.75 10209.75 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. Eef1a1 ENSMUSG00000037742 720.96 7490.03 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
13. mt-Nd5 ENSMUSG00000064367 678.37 7047.56 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
14. Actb ENSMUSG00000029580 623.31 6475.54 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. mt-Rnr1 ENSMUSG00000064337 621.23 6453.93 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
16. Rpsa ENSMUSG00000032518 620.19 6443.13 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
17. Gm13340 ENSMUSG00000083563 530.85 5514.98 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
18. Hmga2 ENSMUSG00000056758 472.67 4910.55 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
19. Rpl23 ENSMUSG00000071415 331.39 3442.80 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
20. Npm1 ENSMUSG00000057113 299.19 3108.27 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. Set ENSMUSG00000054766 268.02 2784.45 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
22. Hbb-y ENSMUSG00000052187 244.13 2536.26 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
23. Rps4x ENSMUSG00000031320 238.93 2482.23 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
24. Tpt1 ENSMUSG00000060126 220.24 2288.06 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
25. Mdk ENSMUSG00000027239 218.16 2266.46 midkine [Source:MGI Symbol;Acc:MGI:96949]
26. Tubb5 ENSMUSG00000001525 210.89 2190.93 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
27. Tmsb4x ENSMUSG00000049775 206.73 2147.71 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
28. Rpl18a ENSMUSG00000045128 205.69 2136.91 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
29. H19 ENSMUSG00000000031 184.91 1921.02 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
30. Rpl4 ENSMUSG00000032399 182.84 1899.52 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
31. Hsp90aa1 ENSMUSG00000021270 179.72 1867.10 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
32. Rps20 ENSMUSG00000028234 178.68 1856.30 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
33. Ywhab ENSMUSG00000018326 172.45 1791.58 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
34. Wbp5 170.37 1769.97 WW domain binding protein 5
35. Eif4g2 ENSMUSG00000005610 168.29 1748.36 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
36. Gm10800 ENSMUSG00000075014 161.02 1672.83 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
37. Gm8292 ENSMUSG00000100215 153.75 1597.30 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
38. Igf2 ENSMUSG00000048583 150.63 1564.89 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
39. Pkm ENSMUSG00000032294 149.59 1554.08 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
40. Sfrp1 ENSMUSG00000031548 149.59 1554.08 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
41. Rps26 ENSMUSG00000025362 148.55 1543.28 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
42. Hmgn1 ENSMUSG00000040681 145.44 1510.97 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
43. Serbp1 ENSMUSG00000036371 145.44 1510.97 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
44. Gm5805 ENSMUSG00000061848 144.40 1500.17 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
45. Pbx1 ENSMUSG00000052534 144.40 1500.17 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
46. Tuba1b ENSMUSG00000023004 143.36 1489.36 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
47. Pabpc1 ENSMUSG00000022283 139.21 1446.25 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
48. Rps3a1 ENSMUSG00000028081 137.13 1424.64 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
49. Paics ENSMUSG00000029247 135.05 1403.03 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
50. Peg3 ENSMUSG00000002265 131.93 1370.62 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
51. Hnrnpc ENSMUSG00000060373 130.89 1359.81 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
52. Nedd4 ENSMUSG00000032216 128.82 1338.31 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
53. Rplp1 ENSMUSG00000007892 128.82 1338.31 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
54. Rps5 ENSMUSG00000012848 122.58 1273.48 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
55. Gm17132 ENSMUSG00000061331 120.51 1251.97 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
56. Cd24a ENSMUSG00000047139 119.47 1241.17 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
57. Gm26870 ENSMUSG00000097312 119.47 1241.17 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
58. Eef1b2 ENSMUSG00000025967 113.23 1176.34 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
59. Rpl26 ENSMUSG00000060938 113.23 1176.34 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
60. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 111.16 1154.84 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
61. Myl6 ENSMUSG00000090841 111.16 1154.84 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
62. Son ENSMUSG00000022961 111.16 1154.84 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
63. Gm14586 ENSMUSG00000083621 109.08 1133.23 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
64. Ubb ENSMUSG00000019505 108.04 1122.42 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
65. Tsc22d1 ENSMUSG00000022010 107.00 1111.62 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
66. Fkbp1a ENSMUSG00000032966 104.92 1090.01 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
67. Cdk4 ENSMUSG00000006728 101.81 1057.70 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
68. Gm5963 ENSMUSG00000052192 99.73 1036.09 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
69. Rrm2 ENSMUSG00000020649 99.73 1036.09 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
70. Ybx1 ENSMUSG00000028639 99.73 1036.09 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
71. Ccnd2 ENSMUSG00000000184 98.69 1025.29 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
72. Grb10 ENSMUSG00000020176 98.69 1025.29 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
73. Pf4 ENSMUSG00000029373 98.69 1025.29 platelet factor 4 [Source:MGI Symbol;Acc:MGI:1888711]
74. Rpl32 ENSMUSG00000057841 98.69 1025.29 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
75. Chchd2 ENSMUSG00000070493 91.42 949.76 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
76. Hsp90ab1 ENSMUSG00000023944 91.42 949.76 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
77. Mapre1 ENSMUSG00000027479 90.38 938.95 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
78. Rpl36a-ps1 ENSMUSG00000060377 90.38 938.95 ribosomal protein L36A, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3642585]
79. Calm1 ENSMUSG00000001175 89.34 928.15 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
80. Rpl36a ENSMUSG00000079435 89.34 928.15 ribosomal protein L36A [Source:MGI Symbol;Acc:MGI:1201789]
81. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 86.22 895.74 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
82. Rpl7 ENSMUSG00000043716 83.11 863.43 ribosomal protein L7 [Source:MGI Symbol;Acc:MGI:98073]
83. H3f3b ENSMUSG00000016559 82.07 852.62 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
84. Tuba1a ENSMUSG00000072235 81.03 841.82 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
85. Hbb-bh1 ENSMUSG00000052217 79.99 831.01 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
86. Pcbp1 ENSMUSG00000051695 77.91 809.40 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
87. Eef1g ENSMUSG00000071644 76.87 798.60 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
88. Gm14303 ENSMUSG00000081344 76.87 798.60 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
89. Rpl21 ENSMUSG00000041453 76.87 798.60 ribosomal protein L21 [Source:MGI Symbol;Acc:MGI:1278340]
90. Cltc ENSMUSG00000047126 75.84 787.90 clathrin, heavy polypeptide (Hc) [Source:MGI Symbol;Acc:MGI:2388633]
91. Pbrm1 ENSMUSG00000042323 75.84 787.90 polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
92. Srsf3 ENSMUSG00000071172 75.84 787.90 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
93. Top2b ENSMUSG00000017485 75.84 787.90 topoisomerase (DNA) II beta [Source:MGI Symbol;Acc:MGI:98791]
94. Tpm4 ENSMUSG00000031799 75.84 787.90 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
95. Arl6ip1 ENSMUSG00000030654 74.80 777.09 ADP-ribosylation factor-like 6 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1858943]
96. Cfl1 ENSMUSG00000056201 73.76 766.29 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
97. Ddx3x ENSMUSG00000000787 73.76 766.29 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
98. Prdx1 ENSMUSG00000028691 73.76 766.29 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
99. Vcp ENSMUSG00000028452 73.76 766.29 valosin containing protein [Source:MGI Symbol;Acc:MGI:99919]
100. Ddx5 ENSMUSG00000020719 72.72 755.49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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