Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_3, section s44.

Sample reads: 96,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2859.96 29716.81 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 2132.29 22155.86 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd1 ENSMUSG00000064341 1673.53 17389.05 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. mt-Nd4 ENSMUSG00000064363 1610.91 16738.38 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Atp6 ENSMUSG00000064357 1459.03 15160.25 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
6. mt-Co1 ENSMUSG00000064351 874.17 9083.19 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
7. mt-Co2 ENSMUSG00000064354 833.36 8659.14 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. Eef1a1 ENSMUSG00000037742 720.30 7484.38 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
9. Mdk ENSMUSG00000027239 716.34 7443.23 midkine [Source:MGI Symbol;Acc:MGI:96949]
10. Actb ENSMUSG00000029580 707.27 7348.99 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Co3 ENSMUSG00000064358 667.31 6933.78 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. mt-Nd3 ENSMUSG00000064360 542.07 5632.45 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
13. mt-Rnr2 ENSMUSG00000064339 540.94 5620.71 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
14. Tubb5 ENSMUSG00000001525 482.00 5008.29 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
15. Hmga2 ENSMUSG00000056758 451.11 4687.32 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
16. H19 ENSMUSG00000000031 443.74 4610.74 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
17. Rpsa ENSMUSG00000032518 442.61 4599.00 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
18. Tuba1b ENSMUSG00000023004 366.95 3812.85 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
19. Ubb ENSMUSG00000019505 302.35 3141.61 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
20. Npm1 ENSMUSG00000057113 291.58 3029.70 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. mt-Nd2 ENSMUSG00000064345 276.28 2870.73 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
22. Tpt1 ENSMUSG00000060126 271.74 2823.55 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
23. Hmgn1 ENSMUSG00000040681 269.76 2802.98 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
24. Rpl23 ENSMUSG00000071415 266.08 2764.74 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
25. Set ENSMUSG00000054766 264.38 2747.08 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
26. Rpl4 ENSMUSG00000032399 255.02 2649.82 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
27. mt-Nd5 ENSMUSG00000064367 254.74 2646.91 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
28. Gm13340 ENSMUSG00000083563 235.19 2443.77 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
29. Chchd2 ENSMUSG00000070493 234.62 2437.85 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
30. Rpl18a ENSMUSG00000045128 210.25 2184.63 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
31. Igf2 ENSMUSG00000048583 206.29 2143.48 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
32. Rps4x ENSMUSG00000031320 202.32 2102.23 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
33. Pkm ENSMUSG00000032294 199.77 2075.74 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
34. Hbb-y ENSMUSG00000052187 187.30 1946.17 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
35. Hsp90ab1 ENSMUSG00000023944 170.87 1775.45 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
36. Eif4g2 ENSMUSG00000005610 168.32 1748.95 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
37. Tuba1a ENSMUSG00000072235 166.05 1725.37 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
38. Eef1b2 ENSMUSG00000025967 164.92 1713.62 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
39. Sfrp1 ENSMUSG00000031548 164.92 1713.62 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
40. Rps20 ENSMUSG00000028234 163.50 1698.87 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
41. Stmn1 ENSMUSG00000028832 159.25 1654.71 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
42. Fkbp1a ENSMUSG00000032966 153.86 1598.70 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
43. Rplp1 ENSMUSG00000007892 149.61 1554.54 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
44. Rps3a1 ENSMUSG00000028081 145.65 1513.40 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
45. Son ENSMUSG00000022961 144.80 1504.56 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
46. Gm8292 ENSMUSG00000100215 137.43 1427.99 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
47. Eef2 ENSMUSG00000034994 135.73 1410.32 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
48. Nedd4 ENSMUSG00000032216 134.88 1401.49 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
49. Rps26 ENSMUSG00000025362 134.60 1398.58 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
50. Rps5 ENSMUSG00000012848 132.61 1377.90 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
51. Ddx5 ENSMUSG00000020719 129.21 1342.57 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
52. Cd24a ENSMUSG00000047139 128.93 1339.67 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
53. Grb10 ENSMUSG00000020176 128.08 1330.83 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
54. Gm5805 ENSMUSG00000061848 126.38 1313.17 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
55. Hnrnpc ENSMUSG00000060373 123.83 1286.67 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
56. Cfl1 ENSMUSG00000056201 122.98 1277.84 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
57. Hsp90aa1 ENSMUSG00000021270 122.13 1269.01 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
58. Pcbp1 ENSMUSG00000051695 121.56 1263.09 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
59. Wbp5 121.56 1263.09 WW domain binding protein 5
60. Ccnd2 ENSMUSG00000000184 120.43 1251.34 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
61. Ywhab ENSMUSG00000018326 119.58 1242.51 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
62. Atp5g3 ENSMUSG00000018770 119.01 1236.59 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
63. Rps9 ENSMUSG00000006333 118.73 1233.68 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
64. Cdk4 ENSMUSG00000006728 115.89 1204.17 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
65. H3f3b ENSMUSG00000016559 114.19 1186.51 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
66. Myl6 ENSMUSG00000090841 112.21 1165.93 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
67. Eif5a ENSMUSG00000078812 111.93 1163.02 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
68. Ncl ENSMUSG00000026234 111.36 1157.10 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
69. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 111.08 1154.19 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
70. Tmsb4x ENSMUSG00000049775 110.79 1151.18 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
71. Serbp1 ENSMUSG00000036371 110.51 1148.27 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
72. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 109.66 1139.44 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
73. Ngfrap1 107.11 1112.94 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
74. Meg3 ENSMUSG00000021268 104.56 1086.45 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
75. Ran ENSMUSG00000029430 103.14 1071.69 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
76. Rpl8 ENSMUSG00000003970 102.86 1068.78 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
77. Eef1g ENSMUSG00000071644 100.88 1048.21 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
78. Pabpc1 ENSMUSG00000022283 100.88 1048.21 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
79. Trim28 ENSMUSG00000005566 100.59 1045.19 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
80. Lamp1 ENSMUSG00000031447 97.19 1009.87 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
81. Cox8a ENSMUSG00000035885 96.63 1004.05 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
82. Cdkn1c ENSMUSG00000037664 94.64 983.37 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
83. Paics ENSMUSG00000029247 94.08 977.55 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
84. Ybx1 ENSMUSG00000028639 93.79 974.54 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
85. Gm14586 ENSMUSG00000083621 92.94 965.71 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
86. Hnrnpk ENSMUSG00000021546 92.66 962.80 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
87. Peg3 ENSMUSG00000002265 92.38 959.89 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
88. Srsf3 ENSMUSG00000071172 91.53 951.06 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
89. Calm1 ENSMUSG00000001175 88.98 924.56 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
90. Rpl32 ENSMUSG00000057841 88.98 924.56 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
91. Mrfap1 ENSMUSG00000055302 88.69 921.55 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
92. Hnrnpa0 ENSMUSG00000007836 88.13 915.73 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
93. Hba-x ENSMUSG00000055609 86.99 903.88 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
94. Ywhae ENSMUSG00000020849 86.43 898.06 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
95. Prdx1 ENSMUSG00000028691 86.14 895.05 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
96. Gnb2l1 Gnb2l1 84.16 874.48
97. Tsc22d1 ENSMUSG00000022010 83.87 871.46 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
98. Erh ENSMUSG00000021131 83.59 868.55 ERH mRNA splicing and mitosis factor [Source:MGI Symbol;Acc:MGI:108089]
99. Pbx1 ENSMUSG00000052534 83.31 865.64 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
100. Igfbp4 ENSMUSG00000017493 82.74 859.72 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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