Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_3, section s43.

Sample reads: 96,257. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3221.51 33467.92 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Rnr2 ENSMUSG00000064339 2915.45 30288.29 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
3. mt-Atp6 ENSMUSG00000064357 1474.88 15322.37 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Cytb ENSMUSG00000064370 1247.97 12965.02 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
5. mt-Nd1 ENSMUSG00000064341 1105.50 11484.92 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Nd4 ENSMUSG00000064363 920.81 9566.20 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. Eef1a1 ENSMUSG00000037742 889.15 9237.28 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
8. mt-Nd3 ENSMUSG00000064360 757.23 7866.78 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
9. Hmga2 ENSMUSG00000056758 736.12 7647.47 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
10. mt-Co2 ENSMUSG00000064354 728.20 7565.19 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
11. mt-Co1 ENSMUSG00000064351 696.54 7236.28 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
12. Mdk ENSMUSG00000027239 643.77 6688.06 midkine [Source:MGI Symbol;Acc:MGI:96949]
13. Rpsa ENSMUSG00000032518 643.77 6688.06 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
14. mt-Co3 ENSMUSG00000064358 538.24 5591.72 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
15. Actb ENSMUSG00000029580 477.55 4961.22 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
16. Chchd2 ENSMUSG00000070493 432.70 4495.27 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
17. Tubb5 ENSMUSG00000001525 419.51 4358.24 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
18. Tpt1 ENSMUSG00000060126 395.76 4111.51 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
19. Npm1 ENSMUSG00000057113 372.02 3864.88 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
20. Rpl23 ENSMUSG00000071415 324.53 3371.51 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
21. Set ENSMUSG00000054766 319.25 3316.65 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
22. Tuba1b ENSMUSG00000023004 300.78 3124.77 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
23. Hmgn1 ENSMUSG00000040681 295.50 3069.92 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
24. Gm5805 ENSMUSG00000061848 292.86 3042.49 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
25. H19 ENSMUSG00000000031 287.59 2987.74 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
26. Ubb ENSMUSG00000019505 277.03 2878.03 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
27. Eef1b2 ENSMUSG00000025967 269.12 2795.86 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
28. mt-Nd2 ENSMUSG00000064345 261.20 2713.58 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
29. Tmsb4x ENSMUSG00000049775 248.01 2576.55 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
30. Eif4g2 ENSMUSG00000005610 242.73 2521.70 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
31. Rps9 ENSMUSG00000006333 232.18 2412.09 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
32. Rps4x ENSMUSG00000031320 218.99 2275.06 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
33. Atp5g3 ENSMUSG00000018770 208.44 2165.46 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
34. Rps20 ENSMUSG00000028234 208.44 2165.46 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
35. Hbb-y ENSMUSG00000052187 203.16 2110.61 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
36. Wbp5 203.16 2110.61 WW domain binding protein 5
37. Rps5 ENSMUSG00000012848 197.88 2055.75 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
38. Hsp90aa1 ENSMUSG00000021270 192.60 2000.90 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
39. Rpl4 ENSMUSG00000032399 189.97 1973.58 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
40. Rplp1 ENSMUSG00000007892 189.97 1973.58 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
41. Rpl18a ENSMUSG00000045128 184.69 1918.72 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
42. Rps3a1 ENSMUSG00000028081 184.69 1918.72 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
43. Gm8292 ENSMUSG00000100215 179.41 1863.87 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
44. Myl6 ENSMUSG00000090841 174.14 1809.12 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
45. Hsp90ab1 ENSMUSG00000023944 168.86 1754.27 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
46. Pcbp1 ENSMUSG00000051695 166.22 1726.84 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
47. Pabpc1 ENSMUSG00000022283 163.58 1699.41 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
48. Rrm2 ENSMUSG00000020649 160.94 1671.99 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
49. Tuba1a ENSMUSG00000072235 160.94 1671.99 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
50. Eef2 ENSMUSG00000034994 155.67 1617.24 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
51. Rpl32 ENSMUSG00000057841 155.67 1617.24 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
52. Serbp1 ENSMUSG00000036371 155.67 1617.24 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
53. Sfrp1 ENSMUSG00000031548 153.03 1589.81 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
54. Ran ENSMUSG00000029430 150.39 1562.39 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
55. Stmn1 ENSMUSG00000028832 150.39 1562.39 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
56. Gm13340 ENSMUSG00000083563 145.11 1507.53 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
57. H3f3b ENSMUSG00000016559 145.11 1507.53 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
58. mt-Nd5 ENSMUSG00000064367 145.11 1507.53 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
59. Cd24a ENSMUSG00000047139 139.84 1452.78 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
60. Rps26 ENSMUSG00000025362 137.20 1425.36 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
61. Ybx1 ENSMUSG00000028639 137.20 1425.36 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
62. Pkm ENSMUSG00000032294 134.56 1397.93 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
63. Erh ENSMUSG00000021131 131.92 1370.50 ERH mRNA splicing and mitosis factor [Source:MGI Symbol;Acc:MGI:108089]
64. Gm14586 ENSMUSG00000083621 129.28 1343.08 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
65. Hnrnpk ENSMUSG00000021546 126.64 1315.65 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
66. Igf2 ENSMUSG00000048583 126.64 1315.65 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
67. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 126.64 1315.65 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
68. Rpl8 ENSMUSG00000003970 124.01 1288.33 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
69. Ywhab ENSMUSG00000018326 121.37 1260.90 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
70. Grb10 ENSMUSG00000020176 118.73 1233.47 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
71. Rpl36a-ps1 ENSMUSG00000060377 118.73 1233.47 ribosomal protein L36A, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3642585]
72. Srsf3 ENSMUSG00000071172 118.73 1233.47 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
73. Sub1 ENSMUSG00000022205 118.73 1233.47 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
74. Ddx5 ENSMUSG00000020719 116.09 1206.05 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
75. Btf3 ENSMUSG00000021660 113.45 1178.62 basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
76. Gm5963 ENSMUSG00000052192 113.45 1178.62 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
77. Gnb2l1 Gnb2l1 113.45 1178.62
78. Hnrnpc ENSMUSG00000060373 113.45 1178.62 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
79. Ngfrap1 113.45 1178.62 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
80. Prdx1 ENSMUSG00000028691 113.45 1178.62 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
81. Tmpo ENSMUSG00000019961 113.45 1178.62 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
82. Gm10076 ENSMUSG00000060143 110.81 1151.19 predicted gene 10076 [Source:MGI Symbol;Acc:MGI:3704451]
83. Nedd4 ENSMUSG00000032216 110.81 1151.19 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
84. Rpl13 ENSMUSG00000000740 110.81 1151.19 ribosomal protein L13 [Source:MGI Symbol;Acc:MGI:105922]
85. Rps14 ENSMUSG00000024608 110.81 1151.19 ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:98107]
86. Rps19-ps6 ENSMUSG00000096942 110.81 1151.19 ribosomal protein S19, pseudogene 6 [Source:MGI Symbol;Acc:MGI:5011818]
87. Ndufa4 ENSMUSG00000029632 108.18 1123.87 Ndufa4, mitochondrial complex associated [Source:MGI Symbol;Acc:MGI:107686]
88. Eif5a ENSMUSG00000078812 105.54 1096.44 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
89. Fkbp1a ENSMUSG00000032966 105.54 1096.44 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
90. Hspe1 ENSMUSG00000073676 105.54 1096.44 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
91. Rpl13a ENSMUSG00000074129 105.54 1096.44 ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
92. Cdk4 ENSMUSG00000006728 102.90 1069.02 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
93. Id2 ENSMUSG00000020644 102.90 1069.02 inhibitor of DNA binding 2 [Source:MGI Symbol;Acc:MGI:96397]
94. Pbrm1 ENSMUSG00000042323 102.90 1069.02 polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
95. Rpl36a ENSMUSG00000079435 102.90 1069.02 ribosomal protein L36A [Source:MGI Symbol;Acc:MGI:1201789]
96. Son ENSMUSG00000022961 102.90 1069.02 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
97. Ddx3x ENSMUSG00000000787 100.26 1041.59 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
98. Gm10800 ENSMUSG00000075014 100.26 1041.59 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
99. Hnrnpa0 ENSMUSG00000007836 100.26 1041.59 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
100. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 100.26 1041.59 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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