Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E10_5_slice_3, section s42.

Sample reads: 96,256. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2396.56 24897.89 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 1898.34 19721.88 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd1 ENSMUSG00000064341 1368.96 14222.14 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. mt-Atp6 ENSMUSG00000064357 1301.61 13522.44 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Nd4 ENSMUSG00000064363 1292.18 13424.48 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Rnr2 ENSMUSG00000064339 1024.75 10646.14 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
7. mt-Co1 ENSMUSG00000064351 997.98 10368.03 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Co2 ENSMUSG00000064354 920.32 9561.22 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
9. Eef1a1 ENSMUSG00000037742 720.24 7482.58 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
10. Mdk ENSMUSG00000027239 630.07 6545.81 midkine [Source:MGI Symbol;Acc:MGI:96949]
11. Actb ENSMUSG00000029580 619.10 6431.84 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. mt-Co3 ENSMUSG00000064358 603.09 6265.51 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
13. Rpsa ENSMUSG00000032518 526.96 5474.59 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
14. Hmga2 ENSMUSG00000056758 523.01 5433.56 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
15. Tubb5 ENSMUSG00000001525 448.42 4658.64 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
16. mt-Nd3 ENSMUSG00000064360 422.53 4389.67 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
17. H19 ENSMUSG00000000031 395.33 4107.09 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
18. Tuba1b ENSMUSG00000023004 332.37 3453.00 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
19. Set ENSMUSG00000054766 323.81 3364.07 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
20. mt-Nd2 ENSMUSG00000064345 311.31 3234.20 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
21. Hbb-y ENSMUSG00000052187 304.29 3161.27 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
22. Npm1 ENSMUSG00000057113 287.61 2987.98 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
23. Hmgn1 ENSMUSG00000040681 272.26 2828.51 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
24. Rpl23 ENSMUSG00000071415 272.04 2826.23 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
25. Gm13340 ENSMUSG00000083563 264.36 2746.44 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
26. mt-Nd5 ENSMUSG00000064367 251.41 2611.90 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
27. Rpl4 ENSMUSG00000032399 247.69 2573.25 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
28. Pkm ENSMUSG00000032294 247.47 2570.97 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
29. Chchd2 ENSMUSG00000070493 232.55 2415.97 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
30. Hsp90ab1 ENSMUSG00000023944 231.45 2404.54 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
31. Ubb ENSMUSG00000019505 224.87 2336.18 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
32. Rps4x ENSMUSG00000031320 218.29 2267.82 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
33. Tpt1 ENSMUSG00000060126 213.90 2222.21 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
34. Igf2 ENSMUSG00000048583 201.83 2096.81 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
35. Rpl18a ENSMUSG00000045128 182.53 1896.31 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
36. Eef1b2 ENSMUSG00000025967 177.48 1843.84 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
37. Grb10 ENSMUSG00000020176 173.75 1805.09 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
38. Hsp90aa1 ENSMUSG00000021270 173.53 1802.81 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
39. Ngfrap1 166.95 1734.45 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
40. Fkbp1a ENSMUSG00000032966 166.51 1729.87 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
41. Rplp1 ENSMUSG00000007892 165.20 1716.27 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
42. Eef2 ENSMUSG00000034994 164.98 1713.98 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
43. Tuba1a ENSMUSG00000072235 161.47 1677.51 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
44. Eif4g2 ENSMUSG00000005610 161.25 1675.23 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
45. Rps20 ENSMUSG00000028234 158.40 1645.62 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
46. Atp5g3 ENSMUSG00000018770 150.94 1568.12 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
47. Rps9 ENSMUSG00000006333 143.48 1490.62 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
48. Wbp5 143.26 1488.33 WW domain binding protein 5
49. Serbp1 ENSMUSG00000036371 140.84 1463.19 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
50. Eif5a ENSMUSG00000078812 140.63 1461.01 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
51. Nedd4 ENSMUSG00000032216 137.99 1433.58 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
52. Son ENSMUSG00000022961 135.80 1410.83 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
53. Hnrnpc ENSMUSG00000060373 135.36 1406.26 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
54. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 134.92 1401.69 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
55. Ywhab ENSMUSG00000018326 132.95 1381.22 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
56. Stmn1 ENSMUSG00000028832 127.90 1328.75 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
57. Rps5 ENSMUSG00000012848 127.46 1324.18 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
58. Rps26 ENSMUSG00000025362 127.24 1321.90 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
59. Peg3 ENSMUSG00000002265 125.71 1306.00 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
60. Ybx1 ENSMUSG00000028639 124.39 1292.29 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
61. Ccnd2 ENSMUSG00000000184 123.73 1285.43 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
62. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 121.54 1262.68 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
63. Rps3a1 ENSMUSG00000028081 120.88 1255.82 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
64. Pabpc1 ENSMUSG00000022283 120.44 1251.25 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
65. Cfl1 ENSMUSG00000056201 118.25 1228.50 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
66. Ncl ENSMUSG00000026234 118.25 1228.50 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
67. Rpl8 ENSMUSG00000003970 117.81 1223.93 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
68. Gm8292 ENSMUSG00000100215 117.59 1221.64 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
69. Myl6 ENSMUSG00000090841 116.49 1210.22 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
70. Trim28 ENSMUSG00000005566 115.40 1198.89 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
71. Cd24a ENSMUSG00000047139 112.98 1173.75 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
72. Pcbp1 ENSMUSG00000051695 111.67 1160.14 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
73. Cdk4 ENSMUSG00000006728 111.01 1153.28 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
74. Gm5805 ENSMUSG00000061848 110.79 1151.00 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
75. Ddx5 ENSMUSG00000020719 110.13 1144.14 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
76. Rrm2 ENSMUSG00000020649 109.47 1137.29 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
77. Eef1g ENSMUSG00000071644 107.94 1121.39 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
78. Pbx1 ENSMUSG00000052534 103.99 1080.35 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
79. Sfrp1 ENSMUSG00000031548 102.01 1059.78 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
80. Tmsb4x ENSMUSG00000049775 99.38 1032.46 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
81. Ran ENSMUSG00000029430 99.16 1030.17 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
82. Hnrnpk ENSMUSG00000021546 98.50 1023.32 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
83. H3f3b ENSMUSG00000016559 98.28 1021.03 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
84. Mrfap1 ENSMUSG00000055302 98.28 1021.03 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
85. 2810417H13Rik 96.97 1007.42 RIKEN cDNA 2810417H13 gene
86. Meg3 ENSMUSG00000021268 95.87 995.99 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
87. Hba-x ENSMUSG00000055609 95.65 993.71 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
88. Btf3 ENSMUSG00000021660 95.21 989.14 basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
89. Gm14586 ENSMUSG00000083621 94.12 977.81 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
90. Rpl32 ENSMUSG00000057841 93.46 970.96 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
91. Cox8a ENSMUSG00000035885 92.14 957.24 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
92. Banf1 ENSMUSG00000024844 91.92 954.96 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
93. Calm1 ENSMUSG00000001175 91.70 952.67 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
94. Nasp ENSMUSG00000028693 91.70 952.67 nuclear autoantigenic sperm protein (histone-binding) [Source:MGI Symbol;Acc:MGI:1355328]
95. Paics ENSMUSG00000029247 91.04 945.82 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
96. Fkbp4 ENSMUSG00000030357 90.61 941.35 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
97. Cdkn1c ENSMUSG00000037664 90.39 939.06 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
98. Lamp1 ENSMUSG00000031447 90.17 936.78 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
99. Prdx1 ENSMUSG00000028691 89.07 925.35 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
100. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 88.63 920.78 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA