Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E10_5_slice_3, section s40.

Sample reads: 96,237. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2466.38 25628.32 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 1756.67 18253.67 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Rnr2 ENSMUSG00000064339 1476.91 15346.67 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
4. mt-Atp6 ENSMUSG00000064357 1354.24 14072.00 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Nd1 ENSMUSG00000064341 1312.74 13640.77 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Nd4 ENSMUSG00000064363 1235.01 12833.07 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1005.86 10451.96 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Co2 ENSMUSG00000064354 752.63 7820.63 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
9. Mdk ENSMUSG00000027239 694.12 7212.65 midkine [Source:MGI Symbol;Acc:MGI:96949]
10. Eef1a1 ENSMUSG00000037742 689.47 7164.33 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
11. Actb ENSMUSG00000029580 636.03 6609.03 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. Rpsa ENSMUSG00000032518 508.70 5285.94 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
13. Tubb5 ENSMUSG00000001525 496.76 5161.87 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
14. Hmga2 ENSMUSG00000056758 481.37 5001.95 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
15. mt-Co3 ENSMUSG00000064358 434.61 4516.06 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
16. H19 ENSMUSG00000000031 433.20 4501.41 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
17. mt-Nd3 ENSMUSG00000064360 362.95 3771.44 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
18. Npm1 ENSMUSG00000057113 330.36 3432.79 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
19. Tuba1b ENSMUSG00000023004 327.53 3403.39 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
20. Gm13340 ENSMUSG00000083563 303.84 3157.22 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
21. Set ENSMUSG00000054766 285.63 2968.00 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
22. mt-Nd2 ENSMUSG00000064345 281.37 2923.73 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
23. mt-Nd5 ENSMUSG00000064367 280.77 2917.50 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
24. Hmgn1 ENSMUSG00000040681 279.55 2904.82 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
25. Hsp90ab1 ENSMUSG00000023944 265.79 2761.84 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
26. Igf2 ENSMUSG00000048583 264.57 2749.16 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
27. Rpl23 ENSMUSG00000071415 248.58 2583.01 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
28. Ubb ENSMUSG00000019505 235.63 2448.45 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
29. Rpl4 ENSMUSG00000032399 225.71 2345.37 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
30. Pkm ENSMUSG00000032294 223.68 2324.27 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
31. Chchd2 ENSMUSG00000070493 218.82 2273.77 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
32. Tpt1 ENSMUSG00000060126 204.25 2122.38 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
33. Tuba1a ENSMUSG00000072235 203.44 2113.96 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
34. Eef1b2 ENSMUSG00000025967 190.08 1975.13 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
35. Rps4x ENSMUSG00000031320 187.65 1949.88 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
36. Eif4g2 ENSMUSG00000005610 183.40 1905.72 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
37. Fkbp1a ENSMUSG00000032966 181.38 1884.73 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
38. Grb10 ENSMUSG00000020176 173.48 1802.64 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
39. Hsp90aa1 ENSMUSG00000021270 166.19 1726.89 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
40. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 164.78 1712.24 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
41. Eif5a ENSMUSG00000078812 163.56 1699.56 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
42. Ngfrap1 161.33 1676.39 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
43. Rps9 ENSMUSG00000006333 153.85 1598.67 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
44. Eef2 ENSMUSG00000034994 152.63 1585.99 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
45. Rpl18a ENSMUSG00000045128 150.81 1567.08 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
46. Rps3a1 ENSMUSG00000028081 148.78 1545.98 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
47. Atp5g3 ENSMUSG00000018770 144.33 1499.74 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
48. Ybx1 ENSMUSG00000028639 143.72 1493.40 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
49. Rplp1 ENSMUSG00000007892 140.69 1461.92 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
50. Trim28 ENSMUSG00000005566 140.08 1455.58 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
51. Ncl ENSMUSG00000026234 138.87 1443.01 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
52. Rps20 ENSMUSG00000028234 137.65 1430.33 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
53. Cfl1 ENSMUSG00000056201 133.60 1388.25 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
54. Serbp1 ENSMUSG00000036371 131.58 1367.26 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
55. Rpl8 ENSMUSG00000003970 130.97 1360.92 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
56. Stmn1 ENSMUSG00000028832 129.76 1348.34 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
57. Ywhab ENSMUSG00000018326 129.55 1346.16 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
58. Nedd4 ENSMUSG00000032216 128.54 1335.67 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
59. Hbb-y ENSMUSG00000052187 128.34 1333.59 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
60. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 127.93 1329.33 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
61. Wbp5 125.91 1308.34 WW domain binding protein 5
62. Pcbp1 ENSMUSG00000051695 125.71 1306.26 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
63. Ddx5 ENSMUSG00000020719 124.29 1291.51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
64. Gm8292 ENSMUSG00000100215 122.06 1268.33 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
65. Ccnd2 ENSMUSG00000000184 120.04 1247.34 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
66. Peg3 ENSMUSG00000002265 119.23 1238.93 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
67. Rrm2 ENSMUSG00000020649 118.62 1232.59 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
68. Son ENSMUSG00000022961 117.81 1224.17 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
69. Pabpc1 ENSMUSG00000022283 116.60 1211.60 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
70. Ran ENSMUSG00000029430 115.18 1196.84 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
71. Rps26 ENSMUSG00000025362 114.37 1188.43 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
72. Myl6 ENSMUSG00000090841 113.97 1184.27 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
73. H3f3b ENSMUSG00000016559 111.34 1156.94 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
74. Hnrnpc ENSMUSG00000060373 111.34 1156.94 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
75. Eef1g ENSMUSG00000071644 111.13 1154.76 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
76. Gm5805 ENSMUSG00000061848 108.50 1127.43 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
77. Banf1 ENSMUSG00000024844 107.49 1116.94 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
78. Cd24a ENSMUSG00000047139 106.48 1106.44 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
79. Rps5 ENSMUSG00000012848 105.46 1095.84 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
80. Cdk4 ENSMUSG00000006728 105.06 1091.69 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
81. Mrfap1 ENSMUSG00000055302 102.23 1062.28 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
82. Pbx1 ENSMUSG00000052534 101.42 1053.86 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
83. Fkbp4 ENSMUSG00000030357 100.00 1039.11 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
84. Anp32b ENSMUSG00000028333 99.59 1034.85 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
85. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 98.78 1026.43 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
86. Lamp1 ENSMUSG00000031447 98.58 1024.35 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
87. Meg3 ENSMUSG00000021268 96.76 1005.44 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
88. Hnrnpk ENSMUSG00000021546 94.13 978.11 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
89. Cox8a ENSMUSG00000035885 92.71 963.36 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
90. Btf3 ENSMUSG00000021660 91.50 950.78 basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
91. Nasp ENSMUSG00000028693 91.50 950.78 nuclear autoantigenic sperm protein (histone-binding) [Source:MGI Symbol;Acc:MGI:1355328]
92. Hspa5 ENSMUSG00000026864 88.87 923.45 heat shock protein 5 [Source:MGI Symbol;Acc:MGI:95835]
93. 2810417H13Rik 88.66 921.27 RIKEN cDNA 2810417H13 gene
94. G3bp1 ENSMUSG00000018583 88.46 919.19 GTPase activating protein (SH3 domain) binding protein 1 [Source:MGI Symbol;Acc:MGI:1351465]
95. Hmgb3 ENSMUSG00000015217 88.46 919.19 high mobility group box 3 [Source:MGI Symbol;Acc:MGI:1098219]
96. Tmsb4x ENSMUSG00000049775 87.25 906.62 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
97. Gm14586 ENSMUSG00000083621 86.84 902.36 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
98. Igfbp4 ENSMUSG00000017493 86.84 902.36 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
99. Paics ENSMUSG00000029247 86.84 902.36 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
100. mt-Rnr1 ENSMUSG00000064337 86.84 902.36 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA