Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_3, section s37.

Sample reads: 96,250. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2096.67 21783.68 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 1963.49 20399.99 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 1675.68 17409.74 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 1514.94 15739.71 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Nd4 ENSMUSG00000064363 1499.33 15577.53 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Rnr2 ENSMUSG00000064339 901.68 9368.15 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
7. mt-Co2 ENSMUSG00000064354 865.86 8995.99 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Co1 ENSMUSG00000064351 804.32 8356.61 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. Eef1a1 ENSMUSG00000037742 741.24 7701.23 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
10. Actb ENSMUSG00000029580 699.30 7265.49 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Co3 ENSMUSG00000064358 690.73 7176.45 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. Hmga2 ENSMUSG00000056758 647.56 6727.93 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
13. Tubb5 ENSMUSG00000001525 576.22 5986.73 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
14. mt-Nd5 ENSMUSG00000064367 539.17 5601.79 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
15. Tuba1b ENSMUSG00000023004 496.61 5159.61 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
16. Mdk ENSMUSG00000027239 480.08 4987.87 midkine [Source:MGI Symbol;Acc:MGI:96949]
17. mt-Nd3 ENSMUSG00000064360 460.79 4787.45 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
18. Npm1 ENSMUSG00000057113 406.29 4221.21 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
19. H19 ENSMUSG00000000031 379.65 3944.43 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
20. Rpsa ENSMUSG00000032518 370.16 3845.84 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
21. mt-Nd2 ENSMUSG00000064345 366.79 3810.82 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
22. Rpl4 ENSMUSG00000032399 320.87 3333.73 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
23. Set ENSMUSG00000054766 299.13 3107.86 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
24. Pkm ENSMUSG00000032294 272.49 2831.08 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
25. Rpl23 ENSMUSG00000071415 271.88 2824.74 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
26. Ubb ENSMUSG00000019505 256.88 2668.90 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
27. Hmgn1 ENSMUSG00000040681 252.29 2621.21 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
28. Gm13340 ENSMUSG00000083563 250.45 2602.09 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
29. Chchd2 ENSMUSG00000070493 245.55 2551.18 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
30. Rps4x ENSMUSG00000031320 245.24 2547.96 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
31. Igf2 ENSMUSG00000048583 226.26 2350.76 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
32. Gm15459 ENSMUSG00000100801 213.10 2214.04 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
33. Eif4g2 ENSMUSG00000005610 209.73 2179.02 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
34. Rpl18a ENSMUSG00000045128 209.12 2172.69 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
35. Hsp90aa1 ENSMUSG00000021270 207.89 2159.91 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
36. Tpt1 ENSMUSG00000060126 202.69 2105.88 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
37. Eef1b2 ENSMUSG00000025967 197.18 2048.63 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
38. Rps20 ENSMUSG00000028234 193.19 2007.18 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
39. Hsp90ab1 ENSMUSG00000023944 188.30 1956.37 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
40. Rplp1 ENSMUSG00000007892 175.74 1825.88 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
41. Rps5 ENSMUSG00000012848 173.60 1803.64 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
42. Eif5a ENSMUSG00000078812 168.40 1749.62 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
43. Wbp5 160.43 1666.81 WW domain binding protein 5
44. Rps3a1 ENSMUSG00000028081 158.90 1650.92 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
45. Grb10 ENSMUSG00000020176 155.84 1619.12 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
46. Pbx1 ENSMUSG00000052534 151.56 1574.66 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
47. Eef2 ENSMUSG00000034994 148.49 1542.76 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
48. Tuba1a ENSMUSG00000072235 144.82 1504.63 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
49. Ywhab ENSMUSG00000018326 142.06 1475.95 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
50. Rps9 ENSMUSG00000006333 140.23 1456.94 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
51. Rps26 ENSMUSG00000025362 135.02 1402.81 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
52. Cd24a ENSMUSG00000047139 132.88 1380.58 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
53. Son ENSMUSG00000022961 131.35 1364.68 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
54. Serbp1 ENSMUSG00000036371 130.74 1358.34 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
55. Ncl ENSMUSG00000026234 124.31 1291.54 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
56. Hnrnpc ENSMUSG00000060373 122.78 1275.64 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
57. Fkbp1a ENSMUSG00000032966 121.86 1266.08 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
58. Gm8292 ENSMUSG00000100215 121.86 1266.08 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
59. Meg3 ENSMUSG00000021268 121.86 1266.08 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
60. Ybx1 ENSMUSG00000028639 121.86 1266.08 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
61. Atp5g3 ENSMUSG00000018770 121.55 1262.86 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
62. Ddx5 ENSMUSG00000020719 120.94 1256.53 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
63. Ran ENSMUSG00000029430 119.71 1243.75 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
64. Nedd4 ENSMUSG00000032216 118.80 1234.29 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
65. Ccnd2 ENSMUSG00000000184 117.88 1224.73 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
66. Peg3 ENSMUSG00000002265 117.57 1221.51 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
67. Ngfrap1 116.65 1211.95 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
68. Trim28 ENSMUSG00000005566 115.73 1202.40 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
69. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 112.98 1173.82 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
70. Sfrp1 ENSMUSG00000031548 112.06 1164.27 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
71. Pcbp1 ENSMUSG00000051695 111.75 1161.04 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
72. Rpl8 ENSMUSG00000003970 111.45 1157.93 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
73. Myl6 ENSMUSG00000090841 109.92 1142.03 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
74. Sod1 ENSMUSG00000022982 109.92 1142.03 superoxide dismutase 1, soluble [Source:MGI Symbol;Acc:MGI:98351]
75. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 109.00 1132.47 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
76. Eef1g ENSMUSG00000071644 105.63 1097.46 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
77. Cfl1 ENSMUSG00000056201 105.32 1094.24 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
78. Pabpc1 ENSMUSG00000022283 103.49 1075.23 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
79. Rpl32 ENSMUSG00000057841 101.96 1059.33 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
80. Hspe1 ENSMUSG00000073676 101.34 1052.89 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
81. 2810417H13Rik 99.20 1030.65 RIKEN cDNA 2810417H13 gene
82. Cdk4 ENSMUSG00000006728 99.20 1030.65 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
83. Cox8a ENSMUSG00000035885 98.28 1021.10 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
84. Srsf3 ENSMUSG00000071172 97.98 1017.98 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
85. Gm5805 ENSMUSG00000061848 97.67 1014.76 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
86. Gnb2l1 Gnb2l1 97.06 1008.42
87. mt-Rnr1 ENSMUSG00000064337 96.44 1001.98 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
88. Paics ENSMUSG00000029247 93.38 970.19 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
89. Stmn1 ENSMUSG00000028832 92.77 963.85 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
90. Hnrnpk ENSMUSG00000021546 91.85 954.29 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
91. Hbb-y ENSMUSG00000052187 91.55 951.17 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
92. Lamp1 ENSMUSG00000031447 91.55 951.17 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
93. Prdx1 ENSMUSG00000028691 91.55 951.17 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
94. Gm14586 ENSMUSG00000083621 91.24 947.95 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
95. Mrfap1 ENSMUSG00000055302 90.93 944.73 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
96. Pdia6 ENSMUSG00000020571 89.40 928.84 protein disulfide isomerase associated 6 [Source:MGI Symbol;Acc:MGI:1919103]
97. Rpl41 ENSMUSG00000093674 88.18 916.16 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
98. Banf1 ENSMUSG00000024844 86.95 903.38 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
99. Fkbp4 ENSMUSG00000030357 85.42 887.48 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
100. Calm1 ENSMUSG00000001175 85.12 884.37 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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