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Experiment Mouse_E10_5_slice_3, section s36.

Sample reads: 96,251. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2436.92 25318.37 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 1958.60 20348.86 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 1629.52 16929.89 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd4 ENSMUSG00000064363 1470.47 15277.44 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Nd1 ENSMUSG00000064341 1436.41 14923.57 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Rnr2 ENSMUSG00000064339 1109.63 11528.49 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
7. mt-Co2 ENSMUSG00000064354 924.60 9606.13 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. Actb ENSMUSG00000029580 840.31 8730.40 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
9. mt-Co1 ENSMUSG00000064351 825.01 8571.44 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. Eef1a1 ENSMUSG00000037742 796.14 8271.49 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
11. mt-Co3 ENSMUSG00000064358 694.82 7218.83 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. Hmga2 ENSMUSG00000056758 585.42 6082.22 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
13. Mdk ENSMUSG00000027239 496.22 5155.47 midkine [Source:MGI Symbol;Acc:MGI:96949]
14. Tubb5 ENSMUSG00000001525 489.29 5083.48 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
15. mt-Nd3 ENSMUSG00000064360 483.81 5026.54 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
16. H19 ENSMUSG00000000031 446.86 4642.65 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
17. Tuba1b ENSMUSG00000023004 383.93 3988.84 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
18. Rpsa ENSMUSG00000032518 370.36 3847.85 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
19. Npm1 ENSMUSG00000057113 354.77 3685.88 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
20. mt-Nd2 ENSMUSG00000064345 342.65 3559.96 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
21. Rpl23 ENSMUSG00000071415 314.07 3263.03 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
22. Pkm ENSMUSG00000032294 307.72 3197.06 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
23. Set ENSMUSG00000054766 298.19 3098.04 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
24. Hmgn1 ENSMUSG00000040681 272.21 2828.12 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
25. Igf2 ENSMUSG00000048583 258.93 2690.15 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
26. Ubb ENSMUSG00000019505 250.27 2600.18 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
27. Rpl4 ENSMUSG00000032399 247.96 2576.18 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
28. Rps4x ENSMUSG00000031320 245.08 2546.26 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
29. mt-Nd5 ENSMUSG00000064367 241.90 2513.22 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
30. Chchd2 ENSMUSG00000070493 239.88 2492.23 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
31. Rpl18a ENSMUSG00000045128 228.91 2378.26 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
32. Tpt1 ENSMUSG00000060126 217.08 2255.35 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
33. Gm13340 ENSMUSG00000083563 216.50 2249.33 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
34. Eef2 ENSMUSG00000034994 197.45 2051.41 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
35. Eif4g2 ENSMUSG00000005610 189.65 1970.37 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
36. Rplp1 ENSMUSG00000007892 183.01 1901.38 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
37. Hsp90ab1 ENSMUSG00000023944 180.99 1880.39 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
38. Rps20 ENSMUSG00000028234 177.53 1844.45 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
39. Eef1b2 ENSMUSG00000025967 175.80 1826.47 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
40. Rps5 ENSMUSG00000012848 169.16 1757.49 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
41. Hsp90aa1 ENSMUSG00000021270 168.00 1745.43 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
42. Eif5a ENSMUSG00000078812 167.72 1742.53 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
43. Rps3a1 ENSMUSG00000028081 166.85 1733.49 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
44. Ywhab ENSMUSG00000018326 153.57 1595.51 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
45. Grb10 ENSMUSG00000020176 152.70 1586.48 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
46. Ncl ENSMUSG00000026234 150.40 1562.58 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
47. Rps9 ENSMUSG00000006333 149.53 1553.54 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
48. Ccnd2 ENSMUSG00000000184 147.51 1532.55 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
49. Fkbp1a ENSMUSG00000032966 146.35 1520.50 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
50. Serbp1 ENSMUSG00000036371 146.35 1520.50 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
51. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 144.62 1502.53 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
52. Cdk4 ENSMUSG00000006728 141.16 1466.58 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
53. Tuba1a ENSMUSG00000072235 139.43 1448.61 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
54. Stmn1 ENSMUSG00000028832 133.65 1388.56 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
55. Son ENSMUSG00000022961 133.08 1382.63 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
56. Atp5g3 ENSMUSG00000018770 132.21 1373.59 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
57. Rpl8 ENSMUSG00000003970 131.92 1370.58 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
58. Rps26 ENSMUSG00000025362 126.44 1313.65 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
59. Wbp5 126.15 1310.63 WW domain binding protein 5
60. Ngfrap1 124.13 1289.65 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
61. Pbx1 ENSMUSG00000052534 123.84 1286.63 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
62. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 123.26 1280.61 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
63. Eef1g ENSMUSG00000071644 122.97 1277.60 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
64. Gm5805 ENSMUSG00000061848 121.82 1265.65 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
65. Peg3 ENSMUSG00000002265 121.82 1265.65 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
66. Trim28 ENSMUSG00000005566 121.82 1265.65 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
67. Ybx1 ENSMUSG00000028639 121.53 1262.64 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
68. Rpl41 ENSMUSG00000093674 120.66 1253.60 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
69. Hbb-y ENSMUSG00000052187 119.22 1238.64 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
70. Nedd4 ENSMUSG00000032216 117.78 1223.67 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
71. Hnrnpc ENSMUSG00000060373 116.62 1211.62 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
72. Ran ENSMUSG00000029430 115.18 1196.66 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
73. Ddx5 ENSMUSG00000020719 114.31 1187.62 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
74. Gm8292 ENSMUSG00000100215 108.83 1130.69 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
75. Cd24a ENSMUSG00000047139 108.54 1127.68 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
76. Lamp1 ENSMUSG00000031447 106.52 1106.69 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
77. Rpl37 ENSMUSG00000041841 106.52 1106.69 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
78. Pabpc1 ENSMUSG00000022283 106.23 1103.68 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
79. Cfl1 ENSMUSG00000056201 105.65 1097.65 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
80. Myl6 ENSMUSG00000090841 105.36 1094.64 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
81. Igfbp4 ENSMUSG00000017493 103.92 1079.68 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
82. Pcbp1 ENSMUSG00000051695 103.92 1079.68 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
83. Srsf3 ENSMUSG00000071172 103.63 1076.66 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
84. Erh ENSMUSG00000021131 102.48 1064.72 ERH mRNA splicing and mitosis factor [Source:MGI Symbol;Acc:MGI:108089]
85. Rpl32 ENSMUSG00000057841 102.48 1064.72 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
86. Gnb2l1 Gnb2l1 101.61 1055.68
87. Paics ENSMUSG00000029247 99.88 1037.70 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
88. 2810417H13Rik 99.59 1034.69 RIKEN cDNA 2810417H13 gene
89. H3f3b ENSMUSG00000016559 98.44 1022.74 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
90. Sfrp1 ENSMUSG00000031548 98.44 1022.74 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
91. Hspe1 ENSMUSG00000073676 95.84 995.73 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
92. Btf3 ENSMUSG00000021660 93.82 974.74 basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
93. Ywhae ENSMUSG00000020849 93.82 974.74 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
94. Cox8a ENSMUSG00000035885 92.08 956.66 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
95. Mrfap1 ENSMUSG00000055302 92.08 956.66 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
96. Crabp1 ENSMUSG00000032291 91.22 947.73 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
97. Rrm2 ENSMUSG00000020649 90.64 941.70 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
98. Anp32b ENSMUSG00000028333 90.06 935.68 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
99. Banf1 ENSMUSG00000024844 90.06 935.68 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
100. Scd2 ENSMUSG00000025203 89.49 929.76 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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