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Experiment Mouse_E10_5_slice_3, section s24.

Sample reads: 96,255. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2417.70 25117.60 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 1735.53 18030.51 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 1692.89 17587.52 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 1236.83 12849.49 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Nd4 ENSMUSG00000064363 945.51 9822.95 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Co2 ENSMUSG00000064354 886.61 9211.03 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Co1 ENSMUSG00000064351 836.97 8695.32 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. Actb ENSMUSG00000029580 755.28 7846.64 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
9. Eef1a1 ENSMUSG00000037742 714.66 7424.64 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
10. mt-Rnr2 ENSMUSG00000064339 674.04 7002.63 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
11. mt-Co3 ENSMUSG00000064358 637.71 6625.20 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
12. Hmga2 ENSMUSG00000056758 628.91 6533.78 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
13. Tubb5 ENSMUSG00000001525 616.72 6407.13 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
14. H19 ENSMUSG00000000031 593.93 6170.37 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
15. Mdk ENSMUSG00000027239 570.01 5921.86 midkine [Source:MGI Symbol;Acc:MGI:96949]
16. Tuba1b ENSMUSG00000023004 526.46 5469.42 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
17. Rpsa ENSMUSG00000032518 458.09 4759.12 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
18. Igf2 ENSMUSG00000048583 424.69 4412.13 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
19. mt-Nd3 ENSMUSG00000064360 412.05 4280.81 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
20. Npm1 ENSMUSG00000057113 347.74 3612.69 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. mt-Nd5 ENSMUSG00000064367 333.75 3467.35 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
22. mt-Nd2 ENSMUSG00000064345 316.82 3291.46 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
23. Set ENSMUSG00000054766 300.13 3118.07 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
24. Rpl4 ENSMUSG00000032399 286.81 2979.68 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
25. Chchd2 ENSMUSG00000070493 273.27 2839.02 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
26. Rpl23 ENSMUSG00000071415 270.79 2813.25 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
27. Hmgn1 ENSMUSG00000040681 261.31 2714.76 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
28. Pkm ENSMUSG00000032294 248.45 2581.16 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
29. Ubb ENSMUSG00000019505 241.91 2513.21 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
30. Hbb-y ENSMUSG00000052187 238.29 2475.61 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
31. Rps4x ENSMUSG00000031320 232.20 2412.34 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
32. Gm13340 ENSMUSG00000083563 229.27 2381.90 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
33. Tpt1 ENSMUSG00000060126 224.53 2332.65 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
34. Hsp90ab1 ENSMUSG00000023944 219.57 2281.12 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
35. Eif4g2 ENSMUSG00000005610 216.86 2252.97 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
36. Eef1b2 ENSMUSG00000025967 200.84 2086.54 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
37. Rpl18a ENSMUSG00000045128 192.49 1999.79 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
38. Hsp90aa1 ENSMUSG00000021270 191.36 1988.05 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
39. Rps20 ENSMUSG00000028234 177.14 1840.32 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
40. Pbx1 ENSMUSG00000052534 165.86 1723.13 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
41. Rps9 ENSMUSG00000006333 161.12 1673.88 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
42. Cdkn1c ENSMUSG00000037664 159.77 1659.86 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
43. Atp5g3 ENSMUSG00000018770 159.09 1652.79 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
44. Gm8292 ENSMUSG00000100215 153.67 1596.49 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
45. Fkbp1a ENSMUSG00000032966 151.19 1570.72 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
46. Eif5a ENSMUSG00000078812 149.16 1549.63 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
47. Ybx1 ENSMUSG00000028639 148.48 1542.57 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
48. Tuba1a ENSMUSG00000072235 144.20 1498.10 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
49. Serbp1 ENSMUSG00000036371 141.94 1474.62 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
50. Rplp1 ENSMUSG00000007892 141.71 1472.23 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
51. Rps5 ENSMUSG00000012848 140.58 1460.49 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
52. Nedd4 ENSMUSG00000032216 139.46 1448.86 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
53. Rps26 ENSMUSG00000025362 138.33 1437.12 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
54. Rps3a1 ENSMUSG00000028081 134.49 1397.22 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
55. Eef1g ENSMUSG00000071644 131.56 1366.78 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
56. Wbp5 130.43 1355.04 WW domain binding protein 5
57. Eef2 ENSMUSG00000034994 128.63 1336.34 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
58. Grb10 ENSMUSG00000020176 127.27 1322.21 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
59. Ywhab ENSMUSG00000018326 127.27 1322.21 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
60. Rpl8 ENSMUSG00000003970 126.37 1312.86 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
61. Cfl1 ENSMUSG00000056201 125.47 1303.51 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
62. Hnrnpc ENSMUSG00000060373 124.79 1296.45 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
63. Pcbp1 ENSMUSG00000051695 123.43 1282.32 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
64. Trim28 ENSMUSG00000005566 122.53 1272.97 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
65. Ncl ENSMUSG00000026234 122.31 1270.68 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
66. Son ENSMUSG00000022961 122.31 1270.68 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
67. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 120.28 1249.59 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
68. Gm5805 ENSMUSG00000061848 118.24 1228.40 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
69. Meg3 ENSMUSG00000021268 115.99 1205.03 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
70. Rpl41 ENSMUSG00000093674 112.83 1172.20 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
71. Ran ENSMUSG00000029430 112.38 1167.52 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
72. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 112.38 1167.52 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
73. Cd24a ENSMUSG00000047139 111.93 1162.85 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
74. 2810417H13Rik 110.12 1144.04 RIKEN cDNA 2810417H13 gene
75. Ddx5 ENSMUSG00000020719 107.86 1120.56 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
76. Mrfap1 ENSMUSG00000055302 106.51 1106.54 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
77. Myl6 ENSMUSG00000090841 105.83 1099.47 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
78. Cdk4 ENSMUSG00000006728 105.61 1097.19 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
79. Peg3 ENSMUSG00000002265 104.25 1083.06 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
80. Hspe1 ENSMUSG00000073676 103.13 1071.42 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
81. Paics ENSMUSG00000029247 102.90 1069.03 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
82. Stmn1 ENSMUSG00000028832 102.00 1059.68 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
83. Btf3 ENSMUSG00000021660 101.32 1052.62 basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
84. Hnrnpk ENSMUSG00000021546 101.32 1052.62 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
85. Ldha ENSMUSG00000063229 99.74 1036.20 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
86. Pabpc1 ENSMUSG00000022283 97.94 1017.50 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
87. Tmsb4x ENSMUSG00000049775 97.48 1012.72 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
88. Crabp1 ENSMUSG00000032291 97.03 1008.05 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
89. Gm14586 ENSMUSG00000083621 96.58 1003.37 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
90. Ngfrap1 96.13 998.70 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
91. Scd2 ENSMUSG00000025203 95.90 996.31 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
92. Hnrnpa0 ENSMUSG00000007836 95.00 986.96 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
93. Anp32b ENSMUSG00000028333 93.42 970.54 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
94. Sod1 ENSMUSG00000022982 93.20 968.26 superoxide dismutase 1, soluble [Source:MGI Symbol;Acc:MGI:98351]
95. Gm10076 ENSMUSG00000060143 92.52 961.19 predicted gene 10076 [Source:MGI Symbol;Acc:MGI:3704451]
96. mt-Rnr1 ENSMUSG00000064337 92.07 956.52 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
97. H3f3b ENSMUSG00000016559 91.84 954.13 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
98. Srsf3 ENSMUSG00000071172 90.94 944.78 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
99. Fkbp4 ENSMUSG00000030357 89.59 930.75 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
100. Calm1 ENSMUSG00000001175 89.36 928.37 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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