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Experiment Mouse_E10_5_slice_3, section s22.

Sample reads: 96,254. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2063.95 21442.72 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Atp6 ENSMUSG00000064357 1945.08 20207.76 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Cytb ENSMUSG00000064370 1936.69 20120.60 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd1 ENSMUSG00000064341 1601.93 16642.72 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Rnr2 ENSMUSG00000064339 1395.33 14496.32 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
6. mt-Nd4 ENSMUSG00000064363 1348.32 14007.92 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co2 ENSMUSG00000064354 1085.12 11273.49 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Co1 ENSMUSG00000064351 1055.18 10962.44 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. Eef1a1 ENSMUSG00000037742 853.07 8862.69 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
10. H19 ENSMUSG00000000031 788.09 8187.60 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
11. Actb ENSMUSG00000029580 680.60 7070.87 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. mt-Co3 ENSMUSG00000064358 679.40 7058.40 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
13. Rpsa ENSMUSG00000032518 511.42 5313.23 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
14. mt-Nd3 ENSMUSG00000064360 494.35 5135.88 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
15. Tubb5 ENSMUSG00000001525 491.66 5107.94 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
16. Hmga2 ENSMUSG00000056758 491.06 5101.70 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
17. Igf2 ENSMUSG00000048583 490.46 5095.47 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
18. Mdk ENSMUSG00000027239 445.85 4632.01 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. Npm1 ENSMUSG00000057113 365.60 3798.28 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
20. Tuba1b ENSMUSG00000023004 347.04 3605.46 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
21. Rpl23 ENSMUSG00000071415 329.07 3418.76 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
22. mt-Nd5 ENSMUSG00000064367 326.08 3387.70 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
23. mt-Nd2 ENSMUSG00000064345 324.88 3375.23 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
24. Rpl4 ENSMUSG00000032399 303.32 3151.24 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
25. Cdkn1c ENSMUSG00000037664 288.65 2998.83 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
26. Gm13340 ENSMUSG00000083563 278.47 2893.07 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
27. Pkm ENSMUSG00000032294 273.98 2846.42 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
28. Chchd2 ENSMUSG00000070493 257.51 2675.31 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
29. Rpl18a ENSMUSG00000045128 256.91 2669.08 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
30. Set ENSMUSG00000054766 254.51 2644.15 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
31. Rps4x ENSMUSG00000031320 254.21 2641.03 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
32. Hmgn1 ENSMUSG00000040681 252.42 2622.43 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
33. Tpt1 ENSMUSG00000060126 236.85 2460.67 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
34. Ubb ENSMUSG00000019505 228.46 2373.51 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
35. Eif4g2 ENSMUSG00000005610 217.08 2255.28 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
36. Hsp90ab1 ENSMUSG00000023944 204.51 2124.69 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
37. Pbx1 ENSMUSG00000052534 200.92 2087.39 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
38. Hsp90aa1 ENSMUSG00000021270 200.62 2084.27 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
39. Rplp1 ENSMUSG00000007892 184.45 1916.28 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
40. Eef1b2 ENSMUSG00000025967 179.96 1869.63 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
41. Rps20 ENSMUSG00000028234 157.50 1636.29 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
42. Tuba1a ENSMUSG00000072235 151.51 1574.06 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
43. Eif5a ENSMUSG00000078812 150.01 1558.48 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
44. Nedd4 ENSMUSG00000032216 147.92 1536.77 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
45. Fkbp1a ENSMUSG00000032966 146.72 1524.30 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
46. Ywhab ENSMUSG00000018326 146.12 1518.07 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
47. Rps3a1 ENSMUSG00000028081 145.52 1511.83 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
48. Serbp1 ENSMUSG00000036371 145.22 1508.71 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
49. Grb10 ENSMUSG00000020176 144.32 1499.36 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
50. Tmsb4x ENSMUSG00000049775 143.72 1493.13 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
51. Eef2 ENSMUSG00000034994 143.13 1487.00 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
52. Son ENSMUSG00000022961 143.13 1487.00 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
53. Gm8292 ENSMUSG00000100215 141.33 1468.30 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
54. Meg3 ENSMUSG00000021268 141.33 1468.30 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
55. Gm5805 ENSMUSG00000061848 136.54 1418.54 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
56. Rps5 ENSMUSG00000012848 135.04 1402.95 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
57. Atp5g3 ENSMUSG00000018770 133.54 1387.37 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
58. Rps9 ENSMUSG00000006333 133.54 1387.37 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
59. Rps26 ENSMUSG00000025362 132.35 1375.01 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
60. Rpl8 ENSMUSG00000003970 130.55 1356.31 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
61. Cfl1 ENSMUSG00000056201 130.25 1353.19 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
62. Ncl ENSMUSG00000026234 128.15 1331.37 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
63. Ybx1 ENSMUSG00000028639 128.15 1331.37 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
64. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 126.36 1312.78 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
65. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 124.56 1294.07 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
66. Pabpc1 ENSMUSG00000022283 122.77 1275.48 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
67. Eef1g ENSMUSG00000071644 120.97 1256.78 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
68. Hnrnpc ENSMUSG00000060373 119.77 1244.31 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
69. 2810417H13Rik 118.57 1231.84 RIKEN cDNA 2810417H13 gene
70. Ddx5 ENSMUSG00000020719 117.38 1219.48 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
71. Myl6 ENSMUSG00000090841 113.78 1182.08 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
72. Peg3 ENSMUSG00000002265 113.48 1178.96 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
73. Gm14586 ENSMUSG00000083621 109.29 1135.43 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
74. H3f3b ENSMUSG00000016559 108.99 1132.32 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
75. Pcbp1 ENSMUSG00000051695 108.99 1132.32 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
76. Scd2 ENSMUSG00000025203 108.39 1126.08 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
77. Ran ENSMUSG00000029430 108.09 1122.97 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
78. Cdk4 ENSMUSG00000006728 107.79 1119.85 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
79. Lamp1 ENSMUSG00000031447 107.19 1113.61 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
80. Stmn1 ENSMUSG00000028832 107.19 1113.61 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
81. Btf3 ENSMUSG00000021660 104.80 1088.78 basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
82. Mrfap1 ENSMUSG00000055302 100.91 1048.37 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
83. Erh ENSMUSG00000021131 97.31 1010.97 ERH mRNA splicing and mitosis factor [Source:MGI Symbol;Acc:MGI:108089]
84. Paics ENSMUSG00000029247 96.12 998.61 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
85. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 95.82 995.49 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
86. Prdx1 ENSMUSG00000028691 94.92 986.14 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
87. Wbp5 94.92 986.14 WW domain binding protein 5
88. Rpl36a ENSMUSG00000079435 94.02 976.79 ribosomal protein L36A [Source:MGI Symbol;Acc:MGI:1201789]
89. Trim28 ENSMUSG00000005566 93.72 973.67 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
90. mt-Rnr1 ENSMUSG00000064337 93.42 970.56 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
91. Hbb-y ENSMUSG00000052187 91.92 954.97 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
92. Cd24a ENSMUSG00000047139 91.62 951.86 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
93. Rpl32 ENSMUSG00000057841 90.73 942.61 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
94. Hnrnpk ENSMUSG00000021546 89.23 927.03 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
95. Ccnd2 ENSMUSG00000000184 88.63 920.79 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
96. Hspe1 ENSMUSG00000073676 88.33 917.68 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
97. Nasp ENSMUSG00000028693 87.13 905.21 nuclear autoantigenic sperm protein (histone-binding) [Source:MGI Symbol;Acc:MGI:1355328]
98. Crabp1 ENSMUSG00000032291 86.53 898.97 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
99. Atp5a1 ENSMUSG00000025428, ENSMUSG00000116276 85.94 892.84 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 [Source:MGI Symbol;Acc:MGI:88115]
100. Ldha ENSMUSG00000063229 85.94 892.84 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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