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Experiment Mouse_E10_5_slice_3, section s15.

Sample reads: 96,237. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2374.25 24670.77 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 1171.33 12171.26 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd1 ENSMUSG00000064341 1145.42 11902.03 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. mt-Atp6 ENSMUSG00000064357 1096.18 11390.38 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Rnr2 ENSMUSG00000064339 1079.67 11218.82 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
6. mt-Nd4 ENSMUSG00000064363 830.60 8630.74 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. Actb ENSMUSG00000029580 827.19 8595.31 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
8. Eef1a1 ENSMUSG00000037742 797.01 8281.71 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
9. mt-Co2 ENSMUSG00000064354 757.16 7867.63 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
10. H19 ENSMUSG00000000031 721.30 7495.01 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
11. Hbb-y ENSMUSG00000052187 707.92 7355.98 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
12. mt-Co1 ENSMUSG00000064351 614.84 6388.79 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
13. Rpsa ENSMUSG00000032518 608.58 6323.74 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
14. Tubb5 ENSMUSG00000001525 532.29 5531.01 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
15. mt-Co3 ENSMUSG00000064358 495.57 5149.45 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
16. Mdk ENSMUSG00000027239 426.40 4430.71 midkine [Source:MGI Symbol;Acc:MGI:96949]
17. Igf2 ENSMUSG00000048583 416.16 4324.31 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
18. Hba-x ENSMUSG00000055609 359.51 3735.66 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
19. mt-Nd3 ENSMUSG00000064360 337.31 3504.98 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
20. Tuba1b ENSMUSG00000023004 334.18 3472.46 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
21. Npm1 ENSMUSG00000057113 322.79 3354.10 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
22. Set ENSMUSG00000054766 321.94 3345.27 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
23. mt-Nd2 ENSMUSG00000064345 290.06 3014.01 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
24. Rpl23 ENSMUSG00000071415 288.92 3002.16 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
25. Pkm ENSMUSG00000032294 286.36 2975.56 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
26. Hba-a1 ENSMUSG00000069919 275.54 2863.13 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
27. Hmga2 ENSMUSG00000056758 264.72 2750.70 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
28. Rpl4 ENSMUSG00000032399 251.63 2614.68 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
29. Hsp90ab1 ENSMUSG00000023944 245.08 2546.62 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
30. Chchd2 ENSMUSG00000070493 235.12 2443.13 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
31. Tpt1 ENSMUSG00000060126 231.13 2401.67 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
32. Hmgn1 ENSMUSG00000040681 230.85 2398.76 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
33. Ubb ENSMUSG00000019505 226.58 2354.39 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
34. mt-Nd5 ENSMUSG00000064367 224.02 2327.79 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
35. Eif4g2 ENSMUSG00000005610 219.46 2280.40 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
36. Rps4x ENSMUSG00000031320 214.06 2224.29 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
37. Gm15459 ENSMUSG00000100801 197.55 2052.74 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
38. Tuba1a ENSMUSG00000072235 196.41 2040.89 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
39. Eef1b2 ENSMUSG00000025967 189.86 1972.83 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
40. Rpl18a ENSMUSG00000045128 185.88 1931.47 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
41. Hsp90aa1 ENSMUSG00000021270 185.31 1925.55 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
42. Gm13340 ENSMUSG00000083563 176.48 1833.80 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
43. Tmsb4x ENSMUSG00000049775 173.07 1798.37 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
44. Rplp1 ENSMUSG00000007892 171.36 1780.60 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
45. Eif5a ENSMUSG00000078812 167.66 1742.15 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
46. Ybx1 ENSMUSG00000028639 167.66 1742.15 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
47. Rps20 ENSMUSG00000028234 163.67 1700.69 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
48. Serbp1 ENSMUSG00000036371 162.82 1691.86 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
49. Atp5g3 ENSMUSG00000018770 159.97 1662.24 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
50. Cdkn1c ENSMUSG00000037664 155.42 1614.97 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
51. mt-Rnr1 ENSMUSG00000064337 155.13 1611.95 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
52. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 153.14 1591.27 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
53. Hbb-bh1 ENSMUSG00000052217 152.86 1588.36 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
54. Ccnd2 ENSMUSG00000000184 152.29 1582.44 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
55. Rps26 ENSMUSG00000025362 150.29 1561.66 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
56. Rps9 ENSMUSG00000006333 149.44 1552.83 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
57. Fkbp1a ENSMUSG00000032966 145.46 1511.47 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
58. Son ENSMUSG00000022961 143.75 1493.70 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
59. Ncl ENSMUSG00000026234 142.32 1478.84 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
60. Rps3a1 ENSMUSG00000028081 140.05 1455.26 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
61. Rps5 ENSMUSG00000012848 136.06 1413.80 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
62. Gm8292 ENSMUSG00000100215 134.64 1399.04 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
63. Grb10 ENSMUSG00000020176 134.64 1399.04 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
64. Eef2 ENSMUSG00000034994 134.35 1396.03 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
65. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 132.93 1381.27 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
66. Rrm2 ENSMUSG00000020649 132.93 1381.27 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
67. Pcbp1 ENSMUSG00000051695 132.08 1372.44 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
68. Meg3 ENSMUSG00000021268 131.51 1366.52 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
69. Cfl1 ENSMUSG00000056201 128.95 1339.92 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
70. Nedd4 ENSMUSG00000032216 128.09 1330.98 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
71. Rpl8 ENSMUSG00000003970 127.24 1322.15 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
72. Pabpc1 ENSMUSG00000022283 124.11 1289.62 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
73. Tubb2b ENSMUSG00000045136 121.26 1260.01 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
74. Myl6 ENSMUSG00000090841 119.55 1242.24 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
75. Ran ENSMUSG00000029430 118.98 1236.32 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
76. Eef1g ENSMUSG00000071644 118.13 1227.49 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
77. Ywhab ENSMUSG00000018326 116.42 1209.72 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
78. Hnrnpc ENSMUSG00000060373 114.14 1186.03 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
79. Cdk4 ENSMUSG00000006728 113.01 1174.28 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
80. Gm5805 ENSMUSG00000061848 112.44 1168.36 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
81. Hba-a2 ENSMUSG00000069917 109.59 1138.75 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
82. Mrfap1 ENSMUSG00000055302 107.03 1112.15 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
83. Cox8a ENSMUSG00000035885 106.46 1106.22 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
84. Banf1 ENSMUSG00000024844 104.75 1088.45 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
85. Ddx5 ENSMUSG00000020719 104.47 1085.55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
86. Rpl41 ENSMUSG00000093674 104.18 1082.53 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
87. Btf3 ENSMUSG00000021660 103.04 1070.69 basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
88. H3f3b ENSMUSG00000016559 103.04 1070.69 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
89. Marcks ENSMUSG00000069662 102.19 1061.85 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
90. 2810417H13Rik 99.63 1035.25 RIKEN cDNA 2810417H13 gene
91. Peg3 ENSMUSG00000002265 99.06 1029.33 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
92. Rpl32 ENSMUSG00000057841 98.20 1020.39 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
93. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 95.93 996.81 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
94. Trim28 ENSMUSG00000005566 95.36 990.88 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
95. Anp32b ENSMUSG00000028333 95.07 987.87 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
96. Gm5963 ENSMUSG00000052192 94.79 984.96 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
97. Nasp ENSMUSG00000028693 94.50 981.95 nuclear autoantigenic sperm protein (histone-binding) [Source:MGI Symbol;Acc:MGI:1355328]
98. Ywhae ENSMUSG00000020849 93.93 976.02 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
99. Stmn1 ENSMUSG00000028832 93.65 973.11 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
100. Hspe1 ENSMUSG00000073676 93.36 970.10 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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