Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E10_5_slice_3, section s14.

Sample reads: 96,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2054.64 21347.84 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Atp6 ENSMUSG00000064357 1688.57 17544.35 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Cytb ENSMUSG00000064370 1630.51 16941.10 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd1 ENSMUSG00000064341 1353.28 14060.66 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Rnr2 ENSMUSG00000064339 1317.37 13687.56 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
6. mt-Co1 ENSMUSG00000064351 973.92 10119.09 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
7. mt-Co2 ENSMUSG00000064354 913.30 9489.24 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. Eef1a1 ENSMUSG00000037742 850.81 8839.97 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
9. mt-Nd4 ENSMUSG00000064363 727.70 7560.85 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
10. Hbb-y ENSMUSG00000052187 707.88 7354.92 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
11. Actb ENSMUSG00000029580 624.41 6487.66 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. H19 ENSMUSG00000000031 613.22 6371.39 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
13. mt-Co3 ENSMUSG00000064358 593.17 6163.07 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
14. Tubb5 ENSMUSG00000001525 547.70 5690.64 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
15. Rpsa ENSMUSG00000032518 539.07 5600.97 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
16. Tuba1a ENSMUSG00000072235 387.28 4023.86 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
17. Tuba1b ENSMUSG00000023004 357.44 3713.82 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
18. Igf2 ENSMUSG00000048583 357.21 3711.43 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
19. mt-Nd3 ENSMUSG00000064360 335.52 3486.07 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
20. Npm1 ENSMUSG00000057113 313.37 3255.93 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. Hba-x ENSMUSG00000055609 299.38 3110.58 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
22. Rpl23 ENSMUSG00000071415 298.22 3098.52 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
23. Set ENSMUSG00000054766 267.44 2778.72 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
24. Mdk ENSMUSG00000027239 265.11 2754.51 midkine [Source:MGI Symbol;Acc:MGI:96949]
25. Gm13340 ENSMUSG00000083563 258.81 2689.05 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
26. mt-Nd2 ENSMUSG00000064345 255.31 2652.69 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
27. Chchd2 ENSMUSG00000070493 246.92 2565.51 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
28. Rpl4 ENSMUSG00000032399 244.36 2538.92 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
29. Tpt1 ENSMUSG00000060126 241.79 2512.21 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
30. Tmsb4x ENSMUSG00000049775 241.56 2509.82 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
31. Hsp90ab1 ENSMUSG00000023944 238.53 2478.34 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
32. Ubb ENSMUSG00000019505 238.06 2473.46 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
33. Hmgn1 ENSMUSG00000040681 229.20 2381.40 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
34. Tubb2b ENSMUSG00000045136 228.50 2374.13 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
35. mt-Nd5 ENSMUSG00000064367 227.10 2359.58 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
36. Pkm ENSMUSG00000032294 225.24 2340.26 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
37. Hba-a1 ENSMUSG00000069919 224.54 2332.98 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
38. Rpl18a ENSMUSG00000045128 213.81 2221.50 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
39. Rps4x ENSMUSG00000031320 211.71 2199.68 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
40. Eif4g2 ENSMUSG00000005610 209.85 2180.35 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
41. Hmga2 ENSMUSG00000056758 199.82 2076.14 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
42. Rplp1 ENSMUSG00000007892 183.03 1901.69 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
43. Eef1b2 ENSMUSG00000025967 182.10 1892.03 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
44. Hbb-bh1 ENSMUSG00000052217 181.87 1889.64 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
45. Hsp90aa1 ENSMUSG00000021270 170.21 1768.49 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
46. Rps9 ENSMUSG00000006333 169.28 1758.83 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
47. Atp5g3 ENSMUSG00000018770 167.41 1739.40 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
48. Ybx1 ENSMUSG00000028639 159.25 1654.62 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
49. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 145.73 1514.14 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
50. Serbp1 ENSMUSG00000036371 145.03 1506.87 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
51. Rps20 ENSMUSG00000028234 140.36 1458.35 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
52. Eef2 ENSMUSG00000034994 138.73 1441.41 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
53. Eif5a ENSMUSG00000078812 137.57 1429.36 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
54. Rps26 ENSMUSG00000025362 136.17 1414.81 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
55. Grb10 ENSMUSG00000020176 135.23 1405.05 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
56. Hnrnpc ENSMUSG00000060373 135.00 1402.66 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
57. Cfl1 ENSMUSG00000056201 134.30 1395.39 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
58. Fkbp1a ENSMUSG00000032966 134.07 1393.00 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
59. Rpl8 ENSMUSG00000003970 133.37 1385.72 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
60. Ywhab ENSMUSG00000018326 131.50 1366.29 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
61. Nedd4 ENSMUSG00000032216 128.24 1332.42 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
62. Ncl ENSMUSG00000026234 127.54 1325.15 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
63. Pabpc1 ENSMUSG00000022283 124.98 1298.55 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
64. Pcbp1 ENSMUSG00000051695 124.98 1298.55 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
65. Myl6 ENSMUSG00000090841 124.51 1293.67 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
66. Rps3a1 ENSMUSG00000028081 124.51 1293.67 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
67. Rps5 ENSMUSG00000012848 121.48 1262.18 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
68. Gm5805 ENSMUSG00000061848 121.25 1259.80 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
69. Eef1g ENSMUSG00000071644 116.81 1213.66 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
70. Son ENSMUSG00000022961 116.58 1211.27 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
71. Gm8292 ENSMUSG00000100215 115.18 1196.73 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
72. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 115.18 1196.73 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
73. Stmn1 ENSMUSG00000028832 114.25 1187.06 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
74. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 114.02 1184.67 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
75. Ran ENSMUSG00000029430 113.55 1179.79 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
76. Cdkn1c ENSMUSG00000037664 112.62 1170.13 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
77. Ccnd2 ENSMUSG00000000184 109.35 1136.15 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
78. Hba-a2 ENSMUSG00000069917 106.09 1102.28 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
79. Ddx5 ENSMUSG00000020719 104.22 1082.85 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
80. Mrfap1 ENSMUSG00000055302 103.06 1070.80 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
81. Hnrnpk ENSMUSG00000021546 101.89 1058.64 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
82. Cdk4 ENSMUSG00000006728 101.43 1053.86 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
83. Trim28 ENSMUSG00000005566 100.73 1046.59 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
84. Btf3 ENSMUSG00000021660 99.56 1034.43 basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
85. Hnrnpa2b1 ENSMUSG00000004980 99.33 1032.04 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
86. H3f3b ENSMUSG00000016559 97.93 1017.50 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
87. Lamp1 ENSMUSG00000031447 96.76 1005.34 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
88. Gm5963 ENSMUSG00000052192 93.50 971.47 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
89. Rrm2 ENSMUSG00000020649 93.50 971.47 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
90. Meg3 ENSMUSG00000021268 93.27 969.08 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
91. Sfpq ENSMUSG00000028820 92.33 959.31 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
92. Marcks ENSMUSG00000069662 91.63 952.04 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
93. Gm14586 ENSMUSG00000083621 91.17 947.26 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
94. Calm1 ENSMUSG00000001175 90.70 942.38 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
95. Cox8a ENSMUSG00000035885 90.23 937.50 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
96. Srsf3 ENSMUSG00000071172 88.84 923.05 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
97. Map1b ENSMUSG00000052727 88.60 920.56 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
98. Rpl32 ENSMUSG00000057841 87.90 913.29 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
99. Hmgb3 ENSMUSG00000015217 86.04 893.96 high mobility group box 3 [Source:MGI Symbol;Acc:MGI:1098219]
100. Prdx1 ENSMUSG00000028691 85.80 891.47 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA