Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_3, section s11.

Sample reads: 96,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2765.86 28739.12 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 1423.15 14787.47 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd4 ENSMUSG00000064363 1246.24 12949.26 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Nd1 ENSMUSG00000064341 1217.60 12651.67 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Atp6 ENSMUSG00000064357 1202.95 12499.45 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
6. mt-Rnr2 ENSMUSG00000064339 1000.47 10395.55 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
7. Actb ENSMUSG00000029580 853.21 8865.42 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
8. mt-Co2 ENSMUSG00000064354 847.07 8801.62 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
9. Eef1a1 ENSMUSG00000037742 831.39 8638.69 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
10. mt-Co1 ENSMUSG00000064351 788.78 8195.95 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
11. Tuba1a ENSMUSG00000072235 665.73 6917.38 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
12. Rpsa ENSMUSG00000032518 535.17 5560.77 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
13. Tubb5 ENSMUSG00000001525 519.15 5394.31 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
14. mt-Co3 ENSMUSG00000064358 464.95 4831.14 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
15. Npm1 ENSMUSG00000057113 393.03 4083.84 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
16. Hbb-y ENSMUSG00000052187 379.39 3942.11 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
17. Ubb ENSMUSG00000019505 365.76 3800.49 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
18. Tuba1b ENSMUSG00000023004 364.05 3782.72 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
19. mt-Nd5 ENSMUSG00000064367 359.96 3740.22 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
20. Tpt1 ENSMUSG00000060126 304.06 3159.38 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
21. Mdk ENSMUSG00000027239 301.33 3131.02 midkine [Source:MGI Symbol;Acc:MGI:96949]
22. Tmsb4x ENSMUSG00000049775 300.65 3123.95 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
23. Rpl4 ENSMUSG00000032399 295.54 3070.86 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
24. mt-Nd3 ENSMUSG00000064360 288.04 2992.93 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
25. H19 ENSMUSG00000000031 287.70 2989.39 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
26. Tubb2b ENSMUSG00000045136 280.20 2911.46 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
27. Set ENSMUSG00000054766 264.18 2745.01 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
28. Gm13340 ENSMUSG00000083563 259.06 2691.81 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
29. Chchd2 ENSMUSG00000070493 250.88 2606.81 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
30. Hmgn1 ENSMUSG00000040681 239.29 2486.38 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
31. Hsp90ab1 ENSMUSG00000023944 236.23 2454.59 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
32. Igf2 ENSMUSG00000048583 231.45 2404.92 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
33. mt-Nd2 ENSMUSG00000064345 227.70 2365.95 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
34. Rps4x ENSMUSG00000031320 226.68 2355.36 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
35. Rpl23 ENSMUSG00000071415 214.07 2224.33 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
36. Hsp90aa1 ENSMUSG00000021270 200.78 2086.24 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
37. Atp5g3 ENSMUSG00000018770 197.03 2047.27 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
38. Eef1b2 ENSMUSG00000025967 196.68 2043.64 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
39. Eif4g2 ENSMUSG00000005610 194.64 2022.44 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
40. Eif5a ENSMUSG00000078812 189.87 1972.88 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
41. Rpl18a ENSMUSG00000045128 185.44 1926.84 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
42. Ybx1 ENSMUSG00000028639 183.39 1905.54 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
43. Rplp1 ENSMUSG00000007892 180.66 1877.18 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
44. Hmga2 ENSMUSG00000056758 174.53 1813.48 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
45. Fkbp1a ENSMUSG00000032966 171.80 1785.12 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
46. Rps20 ENSMUSG00000028234 171.46 1781.58 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
47. Cd24a ENSMUSG00000047139 171.12 1778.05 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
48. Pcbp1 ENSMUSG00000051695 168.73 1753.22 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
49. Eef2 ENSMUSG00000034994 156.12 1622.19 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
50. Pkm ENSMUSG00000032294 152.03 1579.69 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
51. Rps5 ENSMUSG00000012848 150.33 1562.03 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
52. Nedd4 ENSMUSG00000032216 149.98 1558.39 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
53. Map1b ENSMUSG00000052727 148.96 1547.79 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
54. Gm8292 ENSMUSG00000100215 148.62 1544.26 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
55. Rps9 ENSMUSG00000006333 138.40 1438.07 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
56. Hba-a1 ENSMUSG00000069919 137.03 1423.83 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
57. Hnrnpc ENSMUSG00000060373 136.01 1413.23 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
58. Hnrnpk ENSMUSG00000021546 133.96 1391.93 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
59. Rps26 ENSMUSG00000025362 133.62 1388.40 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
60. Stmn1 ENSMUSG00000028832 133.28 1384.87 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
61. Hbb-bh1 ENSMUSG00000052217 132.26 1374.27 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
62. Cfl1 ENSMUSG00000056201 131.92 1370.74 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
63. Hba-x ENSMUSG00000055609 131.92 1370.74 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
64. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 129.87 1349.44 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
65. Ran ENSMUSG00000029430 127.15 1321.17 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
66. Rpl8 ENSMUSG00000003970 126.46 1314.00 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
67. Pabpc1 ENSMUSG00000022283 121.01 1257.37 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
68. Rps3a1 ENSMUSG00000028081 121.01 1257.37 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
69. Son ENSMUSG00000022961 120.67 1253.84 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
70. Serbp1 ENSMUSG00000036371 120.33 1250.31 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
71. Btf3 ENSMUSG00000021660 119.65 1243.24 basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
72. Cdkn1c ENSMUSG00000037664 117.60 1221.94 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
73. Scd2 ENSMUSG00000025203 117.26 1218.41 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
74. Calm1 ENSMUSG00000001175 116.92 1214.88 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
75. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 114.19 1186.51 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
76. Hspe1 ENSMUSG00000073676 113.51 1179.44 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
77. Grb10 ENSMUSG00000020176 111.81 1161.78 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
78. Ddx5 ENSMUSG00000020719 111.13 1154.71 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
79. Ywhab ENSMUSG00000018326 110.78 1151.08 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
80. Eef1g ENSMUSG00000071644 110.44 1147.54 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
81. Ncl ENSMUSG00000026234 109.08 1133.41 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
82. Ccnd2 ENSMUSG00000000184 107.38 1115.75 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
83. Hnrnpa0 ENSMUSG00000007836 107.03 1112.11 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
84. Cox8a ENSMUSG00000035885 106.01 1101.51 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
85. Gm5805 ENSMUSG00000061848 104.99 1090.92 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
86. Rpl41 ENSMUSG00000093674 103.28 1073.15 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
87. Banf1 ENSMUSG00000024844 102.94 1069.61 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
88. H3f3b ENSMUSG00000016559 101.24 1051.95 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
89. Rrm2 ENSMUSG00000020649 100.90 1048.42 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
90. Stmn2 ENSMUSG00000027500 99.54 1034.29 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
91. Hnrnpa1 ENSMUSG00000046434 98.51 1023.58 heterogeneous nuclear ribonucleoprotein A1 [Source:MGI Symbol;Acc:MGI:104820]
92. Marcks ENSMUSG00000069662 98.17 1020.05 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
93. Mrfap1 ENSMUSG00000055302 96.81 1005.92 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
94. Myl6 ENSMUSG00000090841 96.47 1002.39 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
95. mt-Rnr1 ENSMUSG00000064337 96.13 998.85 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
96. Morf4l1 ENSMUSG00000062270 93.40 970.49 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
97. Cdk4 ENSMUSG00000006728 93.06 966.96 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
98. Srsf3 ENSMUSG00000071172 92.38 959.89 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
99. Ldha ENSMUSG00000063229 91.01 945.65 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
100. Hnrnpa2b1 ENSMUSG00000004980 89.99 935.06 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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