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Experiment Mouse_E10_5_slice_3, section s10.

Sample reads: 96,240. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 2475.15 25721.30 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. Ptma ENSMUSG00000026238 2465.01 25615.92 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. Hbb-y ENSMUSG00000052187 1846.22 19185.57 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
4. mt-Cytb ENSMUSG00000064370 1775.21 18447.65 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
5. mt-Atp6 ENSMUSG00000064357 1562.19 16233.99 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
6. mt-Nd1 ENSMUSG00000064341 1389.74 14441.92 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Nd4 ENSMUSG00000064363 1207.14 12544.37 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
8. mt-Co2 ENSMUSG00000064354 1014.41 10541.56 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
9. Eef1a1 ENSMUSG00000037742 923.11 9592.79 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
10. Hba-x ENSMUSG00000055609 740.52 7695.35 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
11. Hba-a1 ENSMUSG00000069919 669.51 6957.42 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
12. mt-Co1 ENSMUSG00000064351 659.36 6851.95 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
13. Rpsa ENSMUSG00000032518 649.22 6746.57 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
14. Hmga2 ENSMUSG00000056758 618.79 6430.35 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
15. mt-Nd5 ENSMUSG00000064367 568.07 5903.28 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
16. mt-Co3 ENSMUSG00000064358 557.92 5797.80 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
17. Hbb-bh1 ENSMUSG00000052217 527.49 5481.58 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
18. mt-Nd2 ENSMUSG00000064345 507.20 5270.73 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
19. Chchd2 ENSMUSG00000070493 497.06 5165.35 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
20. Tuba1a ENSMUSG00000072235 436.19 4532.80 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
21. mt-Nd3 ENSMUSG00000064360 415.91 4322.06 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
22. Tubb5 ENSMUSG00000001525 405.76 4216.58 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
23. Actb ENSMUSG00000029580 334.75 3478.66 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
24. Npm1 ENSMUSG00000057113 334.75 3478.66 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
25. Tuba1b ENSMUSG00000023004 334.75 3478.66 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
26. Ddx3x ENSMUSG00000000787 324.61 3373.29 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
27. Eif4g2 ENSMUSG00000005610 324.61 3373.29 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
28. Hba-a2 ENSMUSG00000069917 304.32 3162.44 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
29. Hsp90aa1 ENSMUSG00000021270 284.03 2951.59 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
30. Atp5g3 ENSMUSG00000018770 273.89 2846.21 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
31. Malat1 ENSMUSG00000092341 273.89 2846.21 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
32. Rplp1 ENSMUSG00000007892 273.89 2846.21 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
33. Set ENSMUSG00000054766 273.89 2846.21 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
34. Tmsb4x ENSMUSG00000049775 273.89 2846.21 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
35. Rpl18a ENSMUSG00000045128 263.75 2740.84 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
36. Gm5805 ENSMUSG00000061848 253.60 2635.36 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
37. Rps20 ENSMUSG00000028234 253.60 2635.36 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
38. Eef2 ENSMUSG00000034994 243.46 2529.99 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
39. Rpl13a ENSMUSG00000074129 243.46 2529.99 ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
40. Ubb ENSMUSG00000019505 243.46 2529.99 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
41. Rpl23 ENSMUSG00000071415 233.31 2424.51 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
42. mt-Rnr1 ENSMUSG00000064337 233.31 2424.51 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
43. Myl6 ENSMUSG00000090841 213.03 2213.77 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
44. Gm13340 ENSMUSG00000083563 202.88 2108.29 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
45. Pabpc1 ENSMUSG00000022283 192.74 2002.92 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
46. Rps9 ENSMUSG00000006333 192.74 2002.92 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
47. Tpt1 ENSMUSG00000060126 192.74 2002.92 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
48. Gm8292 ENSMUSG00000100215 182.59 1897.44 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
49. Mdk ENSMUSG00000027239 182.59 1897.44 midkine [Source:MGI Symbol;Acc:MGI:96949]
50. Hnrnpk ENSMUSG00000021546 172.45 1792.07 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
51. Prdx1 ENSMUSG00000028691 172.45 1792.07 peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
52. Rpl4 ENSMUSG00000032399 172.45 1792.07 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
53. Serbp1 ENSMUSG00000036371 172.45 1792.07 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
54. Tubb2b ENSMUSG00000045136 172.45 1792.07 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
55. Ywhab ENSMUSG00000018326 172.45 1792.07 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
56. Eef1b2 ENSMUSG00000025967 162.31 1686.70 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
57. Hoxc8 ENSMUSG00000001657 162.31 1686.70 homeobox C8 [Source:MGI Symbol;Acc:MGI:96198]
58. Pcbp1 ENSMUSG00000051695 162.31 1686.70 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
59. Rps4x ENSMUSG00000031320 162.31 1686.70 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
60. Rrm2 ENSMUSG00000020649 162.31 1686.70 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
61. H19 ENSMUSG00000000031 152.16 1581.22 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
62. Hmgn1 ENSMUSG00000040681 152.16 1581.22 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
63. Hsp90ab1 ENSMUSG00000023944 152.16 1581.22 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
64. Morf4l1 ENSMUSG00000062270 152.16 1581.22 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
65. Rpl41 ENSMUSG00000093674 152.16 1581.22 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
66. Stmn1 ENSMUSG00000028832 152.16 1581.22 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
67. Tubb3 ENSMUSG00000062380 152.16 1581.22 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
68. Gm5963 ENSMUSG00000052192 142.02 1475.85 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
69. Hspe1 ENSMUSG00000073676 142.02 1475.85 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
70. Rpl39-ps ENSMUSG00000036305 142.02 1475.85 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
71. Top1 ENSMUSG00000070544 142.02 1475.85 topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
72. Ybx1 ENSMUSG00000028639 142.02 1475.85 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
73. Gm10076 ENSMUSG00000060143 131.87 1370.37 predicted gene 10076 [Source:MGI Symbol;Acc:MGI:3704451]
74. Gnb2l1 Gnb2l1 131.87 1370.37
75. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 131.87 1370.37 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
76. Pkm ENSMUSG00000032294 131.87 1370.37 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
77. Ran ENSMUSG00000029430 131.87 1370.37 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
78. Rps5 ENSMUSG00000012848 131.87 1370.37 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
79. Eef1g ENSMUSG00000071644 121.73 1265.00 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
80. Hnrnpc ENSMUSG00000060373 121.73 1265.00 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
81. Srsf1 ENSMUSG00000018379, ENSMUSG00000098301 121.73 1265.00 serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]
82. 2810417H13Rik 111.58 1159.52 RIKEN cDNA 2810417H13 gene
83. Calm2 ENSMUSG00000036438 111.58 1159.52 calmodulin 2 [Source:MGI Symbol;Acc:MGI:103250]
84. Ccdc36 ENSMUSG00000047220 111.58 1159.52 coiled-coil domain containing 36 [Source:MGI Symbol;Acc:MGI:3612242]
85. Cdkn1c ENSMUSG00000037664 111.58 1159.52 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
86. Eif5a ENSMUSG00000078812 111.58 1159.52 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
87. Ldha ENSMUSG00000063229 111.58 1159.52 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
88. Lrrc17 ENSMUSG00000039883 111.58 1159.52 leucine rich repeat containing 17 [Source:MGI Symbol;Acc:MGI:1921761]
89. Ncl ENSMUSG00000026234 111.58 1159.52 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
90. Rps26 ENSMUSG00000025362 111.58 1159.52 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
91. Srsf3 ENSMUSG00000071172 111.58 1159.52 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
92. Ywhag ENSMUSG00000051391 111.58 1159.52 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide [Source:MGI Symbol;Acc:MGI:108109]
93. Csde1 ENSMUSG00000068823 101.44 1054.15 cold shock domain containing E1, RNA binding [Source:MGI Symbol;Acc:MGI:92356]
94. Eif4e ENSMUSG00000028156 101.44 1054.15 eukaryotic translation initiation factor 4E [Source:MGI Symbol;Acc:MGI:95305]
95. Fkbp1a ENSMUSG00000032966 101.44 1054.15 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
96. Hsph1 ENSMUSG00000029657 101.44 1054.15 heat shock 105kDa/110kDa protein 1 [Source:MGI Symbol;Acc:MGI:105053]
97. Igf2 ENSMUSG00000048583 101.44 1054.15 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
98. Pbrm1 ENSMUSG00000042323 101.44 1054.15 polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
99. Ranbp1 ENSMUSG00000005732, ENSMUSG00000099164 101.44 1054.15 RAN binding protein 1 [Source:MGI Symbol;Acc:MGI:96269]
100. Rpl34 ENSMUSG00000062006 101.44 1054.15 ribosomal protein L34 [Source:MGI Symbol;Acc:MGI:1915686]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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