Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_2, section s80.

Sample reads: 96,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Atp6 ENSMUSG00000064357 4673.60 48558.42 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
2. mt-Cytb ENSMUSG00000064370 3505.20 36418.82 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd1 ENSMUSG00000064341 2482.85 25796.66 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. mt-Co2 ENSMUSG00000064354 2190.75 22761.76 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. Ptma ENSMUSG00000026238 2044.70 21244.31 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
6. mt-Co1 ENSMUSG00000064351 1460.50 15174.51 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
7. mt-Nd4 ENSMUSG00000064363 1314.45 13657.06 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
8. mt-Co3 ENSMUSG00000064358 1168.40 12139.61 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
9. mt-Nd2 ENSMUSG00000064345 1168.40 12139.61 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. Hbb-y ENSMUSG00000052187 876.30 9104.70 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
11. Rpl18a ENSMUSG00000045128 876.30 9104.70 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
12. Gm13340 ENSMUSG00000083563 730.25 7587.25 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
13. Gm4617 ENSMUSG00000096544 730.25 7587.25 predicted pseudogene 4617 [Source:MGI Symbol;Acc:MGI:3704225]
14. Mdk ENSMUSG00000027239 730.25 7587.25 midkine [Source:MGI Symbol;Acc:MGI:96949]
15. mt-Rnr2 ENSMUSG00000064339 730.25 7587.25 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
16. Chchd2 ENSMUSG00000070493 584.20 6069.80 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
17. Eef1a1 ENSMUSG00000037742 584.20 6069.80 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
18. H19 ENSMUSG00000000031 584.20 6069.80 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
19. Hmga2 ENSMUSG00000056758 584.20 6069.80 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
20. Nedd4 ENSMUSG00000032216 584.20 6069.80 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
21. Rpl4 ENSMUSG00000032399 584.20 6069.80 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
22. mt-Nd3 ENSMUSG00000064360 584.20 6069.80 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
23. Actb ENSMUSG00000029580 438.15 4552.35 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
24. Gm10073 ENSMUSG00000060019 438.15 4552.35 predicted pseudogene 10073 [Source:MGI Symbol;Acc:MGI:3641908]
25. Gm10800 ENSMUSG00000075014 438.15 4552.35 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
26. Rbm25 ENSMUSG00000010608 438.15 4552.35 RNA binding motif protein 25 [Source:MGI Symbol;Acc:MGI:1914289]
27. Rpl23 ENSMUSG00000071415 438.15 4552.35 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
28. Rps26 ENSMUSG00000025362 438.15 4552.35 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
29. Sepw1 438.15 4552.35 selenoprotein W, muscle 1
30. Tpt1 ENSMUSG00000060126 438.15 4552.35 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
31. Trim28 ENSMUSG00000005566 438.15 4552.35 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
32. Tubb5 ENSMUSG00000001525 438.15 4552.35 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
33. Ubb ENSMUSG00000019505 438.15 4552.35 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
34. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 292.10 3034.90 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
35. Arfip1 ENSMUSG00000074513 292.10 3034.90 ADP-ribosylation factor interacting protein 1 [Source:MGI Symbol;Acc:MGI:1277120]
36. Dtnbp1 ENSMUSG00000057531 292.10 3034.90 dystrobrevin binding protein 1 [Source:MGI Symbol;Acc:MGI:2137586]
37. Eef1d ENSMUSG00000055762 292.10 3034.90 eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:MGI Symbol;Acc:MGI:1913906]
38. Eef2 ENSMUSG00000034994 292.10 3034.90 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
39. Eif4h ENSMUSG00000040731 292.10 3034.90 eukaryotic translation initiation factor 4H [Source:MGI Symbol;Acc:MGI:1341822]
40. Fech ENSMUSG00000024588 292.10 3034.90 ferrochelatase [Source:MGI Symbol;Acc:MGI:95513]
41. Gm14303 ENSMUSG00000081344 292.10 3034.90 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
42. Gm15459 ENSMUSG00000100801 292.10 3034.90 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
43. Hba-a1 ENSMUSG00000069919 292.10 3034.90 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
44. Hnrnpa1 ENSMUSG00000046434 292.10 3034.90 heterogeneous nuclear ribonucleoprotein A1 [Source:MGI Symbol;Acc:MGI:104820]
45. Hp1bp3 ENSMUSG00000028759 292.10 3034.90 heterochromatin protein 1, binding protein 3 [Source:MGI Symbol;Acc:MGI:109369]
46. Myh10 ENSMUSG00000020900 292.10 3034.90 myosin, heavy polypeptide 10, non-muscle [Source:MGI Symbol;Acc:MGI:1930780]
47. Myl6 ENSMUSG00000090841 292.10 3034.90 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
48. Naca ENSMUSG00000061315 292.10 3034.90 nascent polypeptide-associated complex alpha polypeptide [Source:MGI Symbol;Acc:MGI:106095]
49. Ndufa12 ENSMUSG00000020022 292.10 3034.90 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
50. Npm1 ENSMUSG00000057113 292.10 3034.90 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
51. Pa2g4 ENSMUSG00000025364 292.10 3034.90 proliferation-associated 2G4 [Source:MGI Symbol;Acc:MGI:894684]
52. Pkm ENSMUSG00000032294 292.10 3034.90 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
53. Ppm1g ENSMUSG00000029147 292.10 3034.90 protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform [Source:MGI Symbol;Acc:MGI:106065]
54. Romo1 ENSMUSG00000067847 292.10 3034.90 reactive oxygen species modulator 1 [Source:MGI Symbol;Acc:MGI:1914317]
55. Rpl26 ENSMUSG00000060938 292.10 3034.90 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
56. Rps27a-ps2 ENSMUSG00000058838 292.10 3034.90 ribosomal protein S27A, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3643614]
57. Rps3a1 ENSMUSG00000028081 292.10 3034.90 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
58. Rps4x ENSMUSG00000031320 292.10 3034.90 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
59. Rpsa ENSMUSG00000032518 292.10 3034.90 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
60. Rrm2 ENSMUSG00000020649 292.10 3034.90 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
61. Ssbp3 ENSMUSG00000061887 292.10 3034.90 single-stranded DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1919725]
62. Tomm20 ENSMUSG00000093904 292.10 3034.90 translocase of outer mitochondrial membrane 20 [Source:MGI Symbol;Acc:MGI:1915202]
63. Top2a ENSMUSG00000020914 292.10 3034.90 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
64. Tsc22d1 ENSMUSG00000022010 292.10 3034.90 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
65. Uba1 ENSMUSG00000001924 292.10 3034.90 ubiquitin-like modifier activating enzyme 1 [Source:MGI Symbol;Acc:MGI:98890]
66. Uqcrq ENSMUSG00000044894 292.10 3034.90 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:MGI Symbol;Acc:MGI:107807]
67. Ywhab ENSMUSG00000018326 292.10 3034.90 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
68. mt-Nd5 ENSMUSG00000064367 292.10 3034.90 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
69. 0610009O20Rik 146.05 1517.45 RIKEN cDNA 0610009O20 gene
70. 2010003O02Rik 2010003O02Rik 146.05 1517.45
71. 2610524H06Rik ENSMUSG00000092486 146.05 1517.45 RIKEN cDNA 2610524H06 gene [Source:MGI Symbol;Acc:MGI:2447819]
72. 2700050L05Rik 2700050L05Rik 146.05 1517.45
73. 4632427E13Rik ENSMUSG00000074024 146.05 1517.45 RIKEN cDNA 4632427E13 gene [Source:MGI Symbol;Acc:MGI:1915436]
74. 4930452B06Rik ENSMUSG00000021747 146.05 1517.45 RIKEN cDNA 4930452B06 gene [Source:MGI Symbol;Acc:MGI:1926154]
75. AI314180 146.05 1517.45 expressed sequence AI314180, transcript variant X5
76. AI429214 ENSMUSG00000074384 146.05 1517.45 expressed sequence AI429214 [Source:MGI Symbol;Acc:MGI:2142538]
77. Abhd2 ENSMUSG00000039202 146.05 1517.45 abhydrolase domain containing 2 [Source:MGI Symbol;Acc:MGI:1914344]
78. Acbd5 ENSMUSG00000026781 146.05 1517.45 acyl-Coenzyme A binding domain containing 5 [Source:MGI Symbol;Acc:MGI:1921409]
79. Acn9 Acn9 146.05 1517.45
80. Acta2 ENSMUSG00000035783 146.05 1517.45 actin, alpha 2, smooth muscle, aorta [Source:MGI Symbol;Acc:MGI:87909]
81. Actc1 ENSMUSG00000068614 146.05 1517.45 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
82. Actg2 ENSMUSG00000059430 146.05 1517.45 actin, gamma 2, smooth muscle, enteric [Source:MGI Symbol;Acc:MGI:104589]
83. Actn4 ENSMUSG00000054808 146.05 1517.45 actinin alpha 4 [Source:MGI Symbol;Acc:MGI:1890773]
84. Adamts9 ENSMUSG00000030022 146.05 1517.45 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9 [Source:MGI Symbol;Acc:MGI:1916320]
85. Afg3l2 ENSMUSG00000024527 146.05 1517.45 AFG3-like AAA ATPase 2 [Source:MGI Symbol;Acc:MGI:1916847]
86. Ago1 ENSMUSG00000041530 146.05 1517.45 argonaute RISC catalytic subunit 1 [Source:MGI Symbol;Acc:MGI:2446630]
87. Anp32b ENSMUSG00000028333 146.05 1517.45 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
88. Apbb1 ENSMUSG00000037032 146.05 1517.45 amyloid beta (A4) precursor protein-binding, family B, member 1 [Source:MGI Symbol;Acc:MGI:107765]
89. Arf4 ENSMUSG00000021877, ENSMUSG00000115861 146.05 1517.45 ADP-ribosylation factor 4 [Source:MGI Symbol;Acc:MGI:99433]
90. Arfip2 ENSMUSG00000030881 146.05 1517.45 ADP-ribosylation factor interacting protein 2 [Source:MGI Symbol;Acc:MGI:1924182]
91. Arhgap10 ENSMUSG00000037148 146.05 1517.45 Rho GTPase activating protein 10 [Source:MGI Symbol;Acc:MGI:1925764]
92. Arhgef2 ENSMUSG00000028059 146.05 1517.45 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:MGI Symbol;Acc:MGI:103264]
93. Arl1 ENSMUSG00000060904 146.05 1517.45 ADP-ribosylation factor-like 1 [Source:MGI Symbol;Acc:MGI:99436]
94. Arl6ip1 ENSMUSG00000030654 146.05 1517.45 ADP-ribosylation factor-like 6 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1858943]
95. Atf4 ENSMUSG00000042406 146.05 1517.45 activating transcription factor 4 [Source:MGI Symbol;Acc:MGI:88096]
96. Atp5a1 ENSMUSG00000025428, ENSMUSG00000116276 146.05 1517.45 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 [Source:MGI Symbol;Acc:MGI:88115]
97. Atp5b ENSMUSG00000025393 146.05 1517.45 ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit [Source:MGI Symbol;Acc:MGI:107801]
98. Atp5g3 ENSMUSG00000018770 146.05 1517.45 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
99. Atp5h ENSMUSG00000034566 146.05 1517.45 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D [Source:MGI Symbol;Acc:MGI:1918929]
100. Atxn10 ENSMUSG00000016541 146.05 1517.45 ataxin 10 [Source:MGI Symbol;Acc:MGI:1859293]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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