Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_2, section s78.

Sample reads: 96,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3819.32 39682.67 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Nd1 ENSMUSG00000064341 3819.32 39682.67 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
3. mt-Atp6 ENSMUSG00000064357 3564.70 37037.17 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd4 ENSMUSG00000064363 3564.70 37037.17 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Cytb ENSMUSG00000064370 3310.08 34391.67 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
6. mt-Co1 ENSMUSG00000064351 2291.59 23809.58 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
7. Gm13340 ENSMUSG00000083563 1782.35 18518.59 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
8. mt-Co2 ENSMUSG00000064354 1782.35 18518.59 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
9. mt-Rnr2 ENSMUSG00000064339 1527.73 15873.09 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
10. Actb ENSMUSG00000029580 1273.11 13227.59 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. Cdkn1c ENSMUSG00000037664 1018.49 10582.09 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
12. H19 ENSMUSG00000000031 1018.49 10582.09 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
13. Hmga2 ENSMUSG00000056758 1018.49 10582.09 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
14. mt-Co3 ENSMUSG00000064358 1018.49 10582.09 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
15. Eif4g2 ENSMUSG00000005610 763.86 7936.49 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
16. Igf2 ENSMUSG00000048583 763.86 7936.49 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. mt-Nd3 ENSMUSG00000064360 763.86 7936.49 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
18. Armcx4 ENSMUSG00000049804 509.24 5290.99 armadillo repeat containing, X-linked 4 [Source:MGI Symbol;Acc:MGI:2147887]
19. Cdk4 ENSMUSG00000006728 509.24 5290.99 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
20. Dnaja2 ENSMUSG00000031701 509.24 5290.99 DnaJ heat shock protein family (Hsp40) member A2 [Source:MGI Symbol;Acc:MGI:1931882]
21. Elavl1 ENSMUSG00000040028 509.24 5290.99 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Source:MGI Symbol;Acc:MGI:1100851]
22. Fkbp1a ENSMUSG00000032966 509.24 5290.99 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
23. Gm13292 ENSMUSG00000082424 509.24 5290.99 predicted gene 13292 [Source:MGI Symbol;Acc:MGI:3649470]
24. Gm26905 ENSMUSG00000097695 509.24 5290.99 predicted gene, 26905 [Source:MGI Symbol;Acc:MGI:5477399]
25. Gm7536 ENSMUSG00000057036 509.24 5290.99 predicted gene 7536 [Source:MGI Symbol;Acc:MGI:3645137]
26. Lrrc17 ENSMUSG00000039883 509.24 5290.99 leucine rich repeat containing 17 [Source:MGI Symbol;Acc:MGI:1921761]
27. Mast3 ENSMUSG00000031833, ENSMUSG00000110763 509.24 5290.99 microtubule associated serine/threonine kinase 3 [Source:MGI Symbol;Acc:MGI:2683541]
28. Matr3 ENSMUSG00000037236 509.24 5290.99 matrin 3 [Source:MGI Symbol;Acc:MGI:1298379]
29. Mdk ENSMUSG00000027239 509.24 5290.99 midkine [Source:MGI Symbol;Acc:MGI:96949]
30. Pbx1 ENSMUSG00000052534 509.24 5290.99 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
31. Phb2 ENSMUSG00000004264 509.24 5290.99 prohibitin 2 [Source:MGI Symbol;Acc:MGI:102520]
32. Rpl23 ENSMUSG00000071415 509.24 5290.99 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
33. Rpl9-ps6 ENSMUSG00000062456 509.24 5290.99 ribosomal protein L9, pseudogene 6 [Source:MGI Symbol;Acc:MGI:3642682]
34. Rps10-ps1 ENSMUSG00000060438 509.24 5290.99 ribosomal protein S10, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644167]
35. Tecr ENSMUSG00000031708 509.24 5290.99 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
36. Trim28 ENSMUSG00000005566 509.24 5290.99 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
37. Tuba1b ENSMUSG00000023004 509.24 5290.99 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
38. Tubb2b ENSMUSG00000045136 509.24 5290.99 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
39. mt-Nd2 ENSMUSG00000064345 509.24 5290.99 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
40. 0610011F06Rik 254.62 2645.50 RIKEN cDNA 0610011F06 gene
41. 1700021K19Rik 1700021K19Rik 254.62 2645.50
42. 8430429K09Rik ENSMUSG00000034587 254.62 2645.50 RIKEN cDNA 8430429K09 gene [Source:MGI Symbol;Acc:MGI:1918773]
43. A430005L14Rik ENSMUSG00000047613 254.62 2645.50 RIKEN cDNA A430005L14 gene [Source:MGI Symbol;Acc:MGI:2140680]
44. Adamts3 ENSMUSG00000043635 254.62 2645.50 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 [Source:MGI Symbol;Acc:MGI:3045353]
45. Ago2 ENSMUSG00000036698 254.62 2645.50 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
46. Akt1 ENSMUSG00000001729 254.62 2645.50 thymoma viral proto-oncogene 1 [Source:MGI Symbol;Acc:MGI:87986]
47. Alg11 ENSMUSG00000063362 254.62 2645.50 asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:MGI Symbol;Acc:MGI:2142632]
48. Ammecr1l ENSMUSG00000041915 254.62 2645.50 AMME chromosomal region gene 1-like [Source:MGI Symbol;Acc:MGI:2442711]
49. Anxa6 ENSMUSG00000018340 254.62 2645.50 annexin A6 [Source:MGI Symbol;Acc:MGI:88255]
50. Arl5a ENSMUSG00000036093 254.62 2645.50 ADP-ribosylation factor-like 5A [Source:MGI Symbol;Acc:MGI:1922673]
51. Arpc2 ENSMUSG00000006304 254.62 2645.50 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
52. Arpp19 ENSMUSG00000007656 254.62 2645.50 cAMP-regulated phosphoprotein 19 [Source:MGI Symbol;Acc:MGI:1891691]
53. Atpaf2 ENSMUSG00000042709 254.62 2645.50 ATP synthase mitochondrial F1 complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:2180561]
54. Bach1 ENSMUSG00000025612 254.62 2645.50 BTB and CNC homology 1, basic leucine zipper transcription factor 1 [Source:MGI Symbol;Acc:MGI:894680]
55. Banf1 ENSMUSG00000024844 254.62 2645.50 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
56. Baz2a ENSMUSG00000040054 254.62 2645.50 bromodomain adjacent to zinc finger domain, 2A [Source:MGI Symbol;Acc:MGI:2151152]
57. Bcl7a ENSMUSG00000029438 254.62 2645.50 B cell CLL/lymphoma 7A [Source:MGI Symbol;Acc:MGI:1924295]
58. Cacybp ENSMUSG00000014226 254.62 2645.50 calcyclin binding protein [Source:MGI Symbol;Acc:MGI:1270839]
59. Ccdc9 ENSMUSG00000041375 254.62 2645.50 coiled-coil domain containing 9 [Source:MGI Symbol;Acc:MGI:1921443]
60. Cd24a ENSMUSG00000047139 254.62 2645.50 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
61. Cdk1 ENSMUSG00000019942 254.62 2645.50 cyclin-dependent kinase 1 [Source:MGI Symbol;Acc:MGI:88351]
62. Cep135 ENSMUSG00000036403 254.62 2645.50 centrosomal protein 135 [Source:MGI Symbol;Acc:MGI:2681869]
63. Cfl1 ENSMUSG00000056201 254.62 2645.50 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
64. Ciapin1 ENSMUSG00000031781 254.62 2645.50 cytokine induced apoptosis inhibitor 1 [Source:MGI Symbol;Acc:MGI:1922083]
65. Cnpy2 ENSMUSG00000025381 254.62 2645.50 canopy FGF signaling regulator 2 [Source:MGI Symbol;Acc:MGI:1928477]
66. Col1a1 ENSMUSG00000001506 254.62 2645.50 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
67. Col1a2 ENSMUSG00000029661 254.62 2645.50 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
68. Cpsf3l 254.62 2645.50 cleavage and polyadenylation specific factor 3-like, transcript variant X2
69. Cpsf7 ENSMUSG00000034820 254.62 2645.50 cleavage and polyadenylation specific factor 7 [Source:MGI Symbol;Acc:MGI:1917826]
70. Cramp1l ENSMUSG00000038002 254.62 2645.50 cramped chromatin regulator homolog 1 [Source:MGI Symbol;Acc:MGI:1930190]
71. Crip2 ENSMUSG00000006356 254.62 2645.50 cysteine rich protein 2 [Source:MGI Symbol;Acc:MGI:1915587]
72. Cse1l ENSMUSG00000002718 254.62 2645.50 chromosome segregation 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1339951]
73. Ctse ENSMUSG00000004552 254.62 2645.50 cathepsin E [Source:MGI Symbol;Acc:MGI:107361]
74. Cul3 ENSMUSG00000004364 254.62 2645.50 cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
75. Cwc15 ENSMUSG00000004096 254.62 2645.50 CWC15 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1913320]
76. Cxadr ENSMUSG00000022865 254.62 2645.50 coxsackie virus and adenovirus receptor [Source:MGI Symbol;Acc:MGI:1201679]
77. Dhfr ENSMUSG00000021707 254.62 2645.50 dihydrofolate reductase [Source:MGI Symbol;Acc:MGI:94890]
78. Dnajc2 ENSMUSG00000029014 254.62 2645.50 DnaJ heat shock protein family (Hsp40) member C2 [Source:MGI Symbol;Acc:MGI:99470]
79. Dnmt1 ENSMUSG00000004099 254.62 2645.50 DNA methyltransferase (cytosine-5) 1 [Source:MGI Symbol;Acc:MGI:94912]
80. Dpp3 ENSMUSG00000063904 254.62 2645.50 dipeptidylpeptidase 3 [Source:MGI Symbol;Acc:MGI:1922471]
81. Eef1a1 ENSMUSG00000037742 254.62 2645.50 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
82. Eef1e1 ENSMUSG00000001707 254.62 2645.50 eukaryotic translation elongation factor 1 epsilon 1 [Source:MGI Symbol;Acc:MGI:1913393]
83. Eef1g ENSMUSG00000071644 254.62 2645.50 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
84. Eef2 ENSMUSG00000034994 254.62 2645.50 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
85. Efna4 ENSMUSG00000028040 254.62 2645.50 ephrin A4 [Source:MGI Symbol;Acc:MGI:106643]
86. Efr3a ENSMUSG00000015002 254.62 2645.50 EFR3 homolog A [Source:MGI Symbol;Acc:MGI:1923990]
87. Ehmt1 ENSMUSG00000036893 254.62 2645.50 euchromatic histone methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1924933]
88. Eif5 ENSMUSG00000021282 254.62 2645.50 eukaryotic translation initiation factor 5 [Source:MGI Symbol;Acc:MGI:95309]
89. Elp5 ENSMUSG00000018565 254.62 2645.50 elongator acetyltransferase complex subunit 5 [Source:MGI Symbol;Acc:MGI:1859017]
90. Fbxo21 ENSMUSG00000032898 254.62 2645.50 F-box protein 21 [Source:MGI Symbol;Acc:MGI:1924223]
91. Fbxo33 ENSMUSG00000035329 254.62 2645.50 F-box protein 33 [Source:MGI Symbol;Acc:MGI:1917861]
92. Fkbp4 ENSMUSG00000030357 254.62 2645.50 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
93. Fubp3 ENSMUSG00000026843 254.62 2645.50 far upstream element (FUSE) binding protein 3 [Source:MGI Symbol;Acc:MGI:2443699]
94. Gata3 ENSMUSG00000015619 254.62 2645.50 GATA binding protein 3 [Source:MGI Symbol;Acc:MGI:95663]
95. Gatad2a ENSMUSG00000036180 254.62 2645.50 GATA zinc finger domain containing 2A [Source:MGI Symbol;Acc:MGI:2384585]
96. Gcn1l1 ENSMUSG00000041638 254.62 2645.50 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:2444248]
97. Gdpd1 ENSMUSG00000061666 254.62 2645.50 glycerophosphodiester phosphodiesterase domain containing 1 [Source:MGI Symbol;Acc:MGI:1913819]
98. Glg1 ENSMUSG00000003316 254.62 2645.50 golgi apparatus protein 1 [Source:MGI Symbol;Acc:MGI:104967]
99. Gm10800 ENSMUSG00000075014 254.62 2645.50 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
100. Gm12715 ENSMUSG00000059195 254.62 2645.50 predicted gene 12715 [Source:MGI Symbol;Acc:MGI:3650759]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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