Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_2, section s77.

Sample reads: 96,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 5833.15 60606.01 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 4374.86 45454.48 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Atp6 ENSMUSG00000064357 4374.86 45454.48 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 4374.86 45454.48 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. Hba-x ENSMUSG00000055609 2916.57 30302.95 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
6. Metap1 ENSMUSG00000005813 2916.57 30302.95 methionyl aminopeptidase 1 [Source:MGI Symbol;Acc:MGI:1922874]
7. mt-Co2 ENSMUSG00000064354 2916.57 30302.95 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Nd2 ENSMUSG00000064345 2916.57 30302.95 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. B9d2 ENSMUSG00000063439 1458.29 15151.53 B9 protein domain 2 [Source:MGI Symbol;Acc:MGI:2387643]
10. Bre 1458.29 15151.53 brain and reproductive organ-expressed protein, transcript variant X1
11. Ddx54 ENSMUSG00000029599 1458.29 15151.53 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:MGI Symbol;Acc:MGI:1919240]
12. Fhl2 ENSMUSG00000008136 1458.29 15151.53 four and a half LIM domains 2 [Source:MGI Symbol;Acc:MGI:1338762]
13. Gm8738 ENSMUSG00000092540 1458.29 15151.53 predicted gene 8738 [Source:MGI Symbol;Acc:MGI:3644778]
14. Hax1 ENSMUSG00000027944 1458.29 15151.53 HCLS1 associated X-1 [Source:MGI Symbol;Acc:MGI:1346319]
15. Hbb-y ENSMUSG00000052187 1458.29 15151.53 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
16. Hmgn1 ENSMUSG00000040681 1458.29 15151.53 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
17. Igf2r ENSMUSG00000023830 1458.29 15151.53 insulin-like growth factor 2 receptor [Source:MGI Symbol;Acc:MGI:96435]
18. Jpx ENSMUSG00000097571 1458.29 15151.53 Jpx transcript, Xist activator (non-protein coding) [Source:MGI Symbol;Acc:MGI:2180008]
19. Kif22 ENSMUSG00000030677 1458.29 15151.53 kinesin family member 22 [Source:MGI Symbol;Acc:MGI:109233]
20. Kif5b ENSMUSG00000006740 1458.29 15151.53 kinesin family member 5B [Source:MGI Symbol;Acc:MGI:1098268]
21. Klhdc10 ENSMUSG00000029775 1458.29 15151.53 kelch domain containing 10 [Source:MGI Symbol;Acc:MGI:1924038]
22. Lman1 ENSMUSG00000041891 1458.29 15151.53 lectin, mannose-binding, 1 [Source:MGI Symbol;Acc:MGI:1917611]
23. Map1b ENSMUSG00000052727 1458.29 15151.53 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
24. Mbd4 ENSMUSG00000030322 1458.29 15151.53 methyl-CpG binding domain protein 4 [Source:MGI Symbol;Acc:MGI:1333850]
25. Meis2 ENSMUSG00000027210 1458.29 15151.53 Meis homeobox 2 [Source:MGI Symbol;Acc:MGI:108564]
26. Mtfr1l ENSMUSG00000046671 1458.29 15151.53 mitochondrial fission regulator 1-like [Source:MGI Symbol;Acc:MGI:1924074]
27. Nufip2 ENSMUSG00000037857 1458.29 15151.53 nuclear fragile X mental retardation protein interacting protein 2 [Source:MGI Symbol;Acc:MGI:1915814]
28. Nus1 ENSMUSG00000023068 1458.29 15151.53 NUS1 dehydrodolichyl diphosphate synthase subunit [Source:MGI Symbol;Acc:MGI:1196365]
29. Oxsr1 ENSMUSG00000036737 1458.29 15151.53 oxidative-stress responsive 1 [Source:MGI Symbol;Acc:MGI:1917378]
30. Pax6 ENSMUSG00000027168 1458.29 15151.53 paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
31. Plcb3 ENSMUSG00000024960 1458.29 15151.53 phospholipase C, beta 3 [Source:MGI Symbol;Acc:MGI:104778]
32. Poc1b ENSMUSG00000019952 1458.29 15151.53 POC1 centriolar protein B [Source:MGI Symbol;Acc:MGI:1918511]
33. Psma2 ENSMUSG00000015671 1458.29 15151.53 proteasome (prosome, macropain) subunit, alpha type 2 [Source:MGI Symbol;Acc:MGI:104885]
34. Ptdss1 ENSMUSG00000021518 1458.29 15151.53 phosphatidylserine synthase 1 [Source:MGI Symbol;Acc:MGI:1276575]
35. Qk ENSMUSG00000062078 1458.29 15151.53 quaking [Source:MGI Symbol;Acc:MGI:97837]
36. RP24-570C10.6 RP24-570C10.6 1458.29 15151.53
37. Rfc4 ENSMUSG00000022881 1458.29 15151.53 replication factor C (activator 1) 4 [Source:MGI Symbol;Acc:MGI:2146571]
38. Rpl23 ENSMUSG00000071415 1458.29 15151.53 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
39. Rps4x ENSMUSG00000031320 1458.29 15151.53 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
40. Rps5 ENSMUSG00000012848 1458.29 15151.53 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
41. Sec31a ENSMUSG00000035325 1458.29 15151.53 Sec31 homolog A (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1916412]
42. Sf3b2 ENSMUSG00000024853 1458.29 15151.53 splicing factor 3b, subunit 2 [Source:MGI Symbol;Acc:MGI:2441856]
43. Smarcc2 ENSMUSG00000025369 1458.29 15151.53 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:MGI Symbol;Acc:MGI:1915344]
44. Snap47 ENSMUSG00000009894 1458.29 15151.53 synaptosomal-associated protein, 47 [Source:MGI Symbol;Acc:MGI:1915076]
45. Ssbp2 ENSMUSG00000003992 1458.29 15151.53 single-stranded DNA binding protein 2 [Source:MGI Symbol;Acc:MGI:1914220]
46. Tecr ENSMUSG00000031708 1458.29 15151.53 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
47. Tnpo1 ENSMUSG00000009470 1458.29 15151.53 transportin 1 [Source:MGI Symbol;Acc:MGI:2681523]
48. Trim28 ENSMUSG00000005566 1458.29 15151.53 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
49. Tuba1b ENSMUSG00000023004 1458.29 15151.53 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
50. Zyg11b ENSMUSG00000034636 1458.29 15151.53 zyg-ll family member B, cell cycle regulator [Source:MGI Symbol;Acc:MGI:2685277]
51. mt-Co1 ENSMUSG00000064351 1458.29 15151.53 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
52. mt-Co3 ENSMUSG00000064358 1458.29 15151.53 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
53. mt-Nd3 ENSMUSG00000064360 1458.29 15151.53 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
54. 0610007N19Rik 0610007N19Rik 0.00 0.00
55. 0610007P14Rik 0.00 0.00 RIKEN cDNA 0610007P14 gene, transcript variant X1
56. 0610009B14Rik 0610009B14Rik 0.00 0.00
57. 0610009B22Rik ENSMUSG00000007777 0.00 0.00 RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
58. 0610009D07Rik 0610009D07Rik 0.00 0.00
59. 0610009E02Rik ENSMUSG00000086714 0.00 0.00 RIKEN cDNA 0610009E02 gene [Source:MGI Symbol;Acc:MGI:3698435]
60. 0610009L18Rik ENSMUSG00000043644 0.00 0.00 RIKEN cDNA 0610009L18 gene [Source:MGI Symbol;Acc:MGI:1914088]
61. 0610009O20Rik 0.00 0.00 RIKEN cDNA 0610009O20 gene
62. 0610010F05Rik ENSMUSG00000042208 0.00 0.00 RIKEN cDNA 0610010F05 gene [Source:MGI Symbol;Acc:MGI:1918925]
63. 0610010K14Rik ENSMUSG00000020831 0.00 0.00 RIKEN cDNA 0610010K14 gene [Source:MGI Symbol;Acc:MGI:1915609]
64. 0610011F06Rik 0.00 0.00 RIKEN cDNA 0610011F06 gene
65. 0610012D04Rik ENSMUSG00000089755 0.00 0.00 RIKEN cDNA 0610012D04 gene [Source:MGI Symbol;Acc:MGI:1918926]
66. 0610012G03Rik ENSMUSG00000107002 0.00 0.00 RIKEN cDNA 0610012G03 gene [Source:MGI Symbol;Acc:MGI:1913301]
67. 0610012H03Rik 0610012H03Rik 0.00 0.00
68. 0610025J13Rik ENSMUSG00000046683 0.00 0.00 RIKEN cDNA 0610025J13 gene [Source:MGI Symbol;Acc:MGI:1915618]
69. 0610030E20Rik ENSMUSG00000058706, ENSMUSG00000108680 0.00 0.00 RIKEN cDNA 0610030E20 gene [Source:MGI Symbol;Acc:MGI:1915614]
70. 0610031J06Rik 0610031J06Rik 0.00 0.00
71. 0610037L13Rik ENSMUSG00000028608 0.00 0.00 RIKEN cDNA 0610037L13 gene [Source:MGI Symbol;Acc:MGI:1921348]
72. 0610039K10Rik ENSMUSG00000058812 0.00 0.00 RIKEN cDNA 0610039K10 gene [Source:MGI Symbol;Acc:MGI:1915636]
73. 0610040B09Rik 0610040B09Rik 0.00 0.00
74. 0610040B10Rik ENSMUSG00000089889 0.00 0.00 RIKEN cDNA 0610040B10 gene [Source:MGI Symbol;Acc:MGI:1914922]
75. 0610040F04Rik ENSMUSG00000087341 0.00 0.00 RIKEN cDNA 0610040F04 gene [Source:MGI Symbol;Acc:MGI:1922644]
76. 0610040J01Rik ENSMUSG00000060512 0.00 0.00 RIKEN cDNA 0610040J01 gene [Source:MGI Symbol;Acc:MGI:1923511]
77. 0610043K17Rik ENSMUSG00000087361 0.00 0.00 RIKEN cDNA 0610043K17 gene [Source:MGI Symbol;Acc:MGI:1915650]
78. 1010001B22Rik ENSMUSG00000097863 0.00 0.00 RIKEN cDNA 1010001B22 gene [Source:MGI Symbol;Acc:MGI:1922653]
79. 1010001N08Rik ENSMUSG00000097222 0.00 0.00 RIKEN cDNA 1010001N08 gene [Source:MGI Symbol;Acc:MGI:1915684]
80. 1100001G20Rik 1100001G20Rik 0.00 0.00
81. 1110001A16Rik 1110001A16Rik 0.00 0.00
82. 1110001J03Rik 0.00 0.00 RIKEN cDNA 1110001J03 gene
83. 1110002E22Rik ENSMUSG00000090066 0.00 0.00 RIKEN cDNA 1110002E22 gene [Source:MGI Symbol;Acc:MGI:1915066]
84. 1110002J07Rik ENSMUSG00000097134 0.00 0.00 RIKEN cDNA 1110002J07 gene [Source:MGI Symbol;Acc:MGI:1915738]
85. 1110002L01Rik ENSMUSG00000071456 0.00 0.00 RIKEN cDNA 1110002L01 gene [Source:MGI Symbol;Acc:MGI:1915821]
86. 1110004E09Rik 0.00 0.00 RIKEN cDNA 1110004E09 gene
87. 1110004F10Rik ENSMUSG00000030663 0.00 0.00 RIKEN cDNA 1110004F10 gene [Source:MGI Symbol;Acc:MGI:1929274]
88. 1110006G14Rik 1110006G14Rik 0.00 0.00
89. 1110007C09Rik 1110007C09Rik 0.00 0.00
90. 1110008F13Rik 0.00 0.00 RIKEN cDNA 1110008F13 gene
91. 1110008J03Rik 1110008J03Rik 0.00 0.00
92. 1110008L16Rik ENSMUSG00000021023 0.00 0.00 RIKEN cDNA 1110008L16 gene [Source:MGI Symbol;Acc:MGI:1913382]
93. 1110008P14Rik ENSMUSG00000039195 0.00 0.00 RIKEN cDNA 1110008P14 gene [Source:MGI Symbol;Acc:MGI:1920987]
94. 1110012L19Rik ENSMUSG00000045237 0.00 0.00 RIKEN cDNA 1110012L19 gene [Source:MGI Symbol;Acc:MGI:1915868]
95. 1110017D15Rik ENSMUSG00000028441 0.00 0.00 RIKEN cDNA 1110017D15 gene [Source:MGI Symbol;Acc:MGI:1920971]
96. 1110018N20Rik ENSMUSG00000085151 0.00 0.00 RIKEN cDNA 1110018N20 gene [Source:MGI Symbol;Acc:MGI:1915753]
97. 1110019D14Rik ENSMUSG00000097616 0.00 0.00 RIKEN cDNA 1110019D14 gene [Source:MGI Symbol;Acc:MGI:1923561]
98. 1110020A21Rik ENSMUSG00000097047 0.00 0.00 RIKEN cDNA 1110020A21 gene [Source:MGI Symbol;Acc:MGI:1915781]
99. 1110028F11Rik ENSMUSG00000085972 0.00 0.00 RIKEN cDNA 1110028F11 gene [Source:MGI Symbol;Acc:MGI:1915940]
100. 1110032A03Rik ENSMUSG00000037971 0.00 0.00 RIKEN cDNA 1110032A03 gene [Source:MGI Symbol;Acc:MGI:1915971]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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