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Experiment Mouse_E10_5_slice_2, section s75.

Sample reads: 96,242. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4327.12 44960.94 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 3514.91 36521.67 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. Ptma ENSMUSG00000026238 2492.65 25899.88 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
4. mt-Nd4 ENSMUSG00000064363 1890.49 19643.14 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
5. mt-Co2 ENSMUSG00000064354 1582.41 16442.03 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd1 ENSMUSG00000064341 1568.41 16296.56 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Co1 ENSMUSG00000064351 1302.34 13531.96 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Nd2 ENSMUSG00000064345 1218.32 12658.95 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. Igf2 ENSMUSG00000048583 1064.28 11058.40 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
10. Actb ENSMUSG00000029580 994.26 10330.86 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Nd3 ENSMUSG00000064360 980.25 10185.29 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. Mdk ENSMUSG00000027239 938.24 9748.78 midkine [Source:MGI Symbol;Acc:MGI:96949]
13. H19 ENSMUSG00000000031 910.24 9457.85 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
14. Eef1a1 ENSMUSG00000037742 546.14 5674.67 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. Cfl1 ENSMUSG00000056201 490.13 5092.70 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
16. mt-Nd5 ENSMUSG00000064367 448.12 4656.19 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
17. mt-Co3 ENSMUSG00000064358 434.11 4510.62 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. mt-Rnr2 ENSMUSG00000064339 434.11 4510.62 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
19. Npm1 ENSMUSG00000057113 378.10 3928.65 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
20. Rpsa ENSMUSG00000032518 378.10 3928.65 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
21. Gm13340 ENSMUSG00000083563 364.09 3783.08 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
22. Hsp90ab1 ENSMUSG00000023944 350.09 3637.61 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
23. Tuba1b ENSMUSG00000023004 336.09 3492.14 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
24. Col1a1 ENSMUSG00000001506 294.08 3055.64 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
25. Tubb5 ENSMUSG00000001525 294.08 3055.64 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
26. Rpl4 ENSMUSG00000032399 280.07 2910.07 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
27. Chchd2 ENSMUSG00000070493 266.07 2764.60 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
28. Crabp1 ENSMUSG00000032291 252.07 2619.13 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
29. Rps4x ENSMUSG00000031320 238.06 2473.56 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
30. Rpl41 ENSMUSG00000093674 224.06 2328.10 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
31. Pkm ENSMUSG00000032294 210.05 2182.52 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
32. Hmgn1 ENSMUSG00000040681 196.05 2037.06 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
33. Hnrnpa2b1 ENSMUSG00000004980 196.05 2037.06 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
34. Tpt1 ENSMUSG00000060126 196.05 2037.06 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
35. Fkbp1a ENSMUSG00000032966 182.05 1891.59 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
36. Rpl37 ENSMUSG00000041841 182.05 1891.59 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
37. Tecr ENSMUSG00000031708 182.05 1891.59 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
38. Ubb ENSMUSG00000019505 182.05 1891.59 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
39. Fn1 ENSMUSG00000026193 168.04 1746.02 fibronectin 1 [Source:MGI Symbol;Acc:MGI:95566]
40. Gm2000 ENSMUSG00000078193 168.04 1746.02 predicted gene 2000 [Source:MGI Symbol;Acc:MGI:3780170]
41. Gm9844 ENSMUSG00000091955 168.04 1746.02 predicted pseudogene 9844 [Source:MGI Symbol;Acc:MGI:3704288]
42. H3f3b ENSMUSG00000016559 168.04 1746.02 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
43. Hnrnpa3 ENSMUSG00000059005 168.04 1746.02 heterogeneous nuclear ribonucleoprotein A3 [Source:MGI Symbol;Acc:MGI:1917171]
44. Myl6 ENSMUSG00000090841 168.04 1746.02 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
45. Peg3 ENSMUSG00000002265 168.04 1746.02 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
46. Rps26 ENSMUSG00000025362 168.04 1746.02 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
47. Tmsb10 ENSMUSG00000079523 168.04 1746.02 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
48. Cdk4 ENSMUSG00000006728 154.04 1600.55 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
49. Gm10076 ENSMUSG00000060143 154.04 1600.55 predicted gene 10076 [Source:MGI Symbol;Acc:MGI:3704451]
50. Grb10 ENSMUSG00000020176 154.04 1600.55 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
51. Ndufa12 ENSMUSG00000020022 154.04 1600.55 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
52. Ngfrap1 154.04 1600.55 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
53. Rps20 ENSMUSG00000028234 154.04 1600.55 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
54. Sfrp1 ENSMUSG00000031548 154.04 1600.55 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
55. Uqcrq ENSMUSG00000044894 154.04 1600.55 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:MGI Symbol;Acc:MGI:107807]
56. Hmga2 ENSMUSG00000056758 140.04 1455.09 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
57. Igfbp4 ENSMUSG00000017493 140.04 1455.09 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
58. Peg10 ENSMUSG00000092035 140.04 1455.09 paternally expressed 10 [Source:MGI Symbol;Acc:MGI:2157785]
59. Rpl18a ENSMUSG00000045128 140.04 1455.09 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
60. Trim28 ENSMUSG00000005566 140.04 1455.09 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
61. Cacybp ENSMUSG00000014226 126.03 1309.51 calcyclin binding protein [Source:MGI Symbol;Acc:MGI:1270839]
62. Dynll1 ENSMUSG00000009013 126.03 1309.51 dynein light chain LC8-type 1 [Source:MGI Symbol;Acc:MGI:1861457]
63. Eif5a ENSMUSG00000078812 126.03 1309.51 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
64. Fkbp4 ENSMUSG00000030357 126.03 1309.51 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
65. Paics ENSMUSG00000029247 126.03 1309.51 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
66. Rpl8 ENSMUSG00000003970 126.03 1309.51 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
67. Rps15 ENSMUSG00000063457 126.03 1309.51 ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:98117]
68. Rps5 ENSMUSG00000012848 126.03 1309.51 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
69. Tuba1a ENSMUSG00000072235 126.03 1309.51 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
70. U2af2 ENSMUSG00000030435 126.03 1309.51 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
71. Col1a2 ENSMUSG00000029661 112.03 1164.05 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
72. Ddx5 ENSMUSG00000020719 112.03 1164.05 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
73. Eef2 ENSMUSG00000034994 112.03 1164.05 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
74. Gm14586 ENSMUSG00000083621 112.03 1164.05 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
75. Gm21897 ENSMUSG00000094472 112.03 1164.05 predicted gene, 21897 [Source:MGI Symbol;Acc:MGI:5434061]
76. Hnrnpdl ENSMUSG00000029328 112.03 1164.05 heterogeneous nuclear ribonucleoprotein D-like [Source:MGI Symbol;Acc:MGI:1355299]
77. Lamp1 ENSMUSG00000031447 112.03 1164.05 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
78. Mrfap1 ENSMUSG00000055302 112.03 1164.05 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
79. Sepw1 112.03 1164.05 selenoprotein W, muscle 1
80. Col3a1 ENSMUSG00000026043 98.03 1018.58 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
81. Cox8a ENSMUSG00000035885 98.03 1018.58 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
82. Eif4g2 ENSMUSG00000005610 98.03 1018.58 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
83. Erdr1 98.03 1018.58 erythroid differentiation regulator 1, transcript variant 1, non-coding
84. Fscn1 ENSMUSG00000029581 98.03 1018.58 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
85. Gm10800 ENSMUSG00000075014 98.03 1018.58 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
86. Gm5506 Gm5506 98.03 1018.58
87. Gm5963 ENSMUSG00000052192 98.03 1018.58 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
88. Hand1 ENSMUSG00000037335 98.03 1018.58 heart and neural crest derivatives expressed 1 [Source:MGI Symbol;Acc:MGI:103577]
89. Hnrnpab ENSMUSG00000020358 98.03 1018.58 heterogeneous nuclear ribonucleoprotein A/B [Source:MGI Symbol;Acc:MGI:1330294]
90. Hnrnpc ENSMUSG00000060373 98.03 1018.58 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
91. Hnrnph1 ENSMUSG00000007850 98.03 1018.58 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
92. Jund ENSMUSG00000071076, ENSMUSG00000110974 98.03 1018.58 jun D proto-oncogene [Source:MGI Symbol;Acc:MGI:96648]
93. Marcksl1 ENSMUSG00000047945 98.03 1018.58 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
94. Pdlim7 ENSMUSG00000021493 98.03 1018.58 PDZ and LIM domain 7 [Source:MGI Symbol;Acc:MGI:1914649]
95. Rpl13a ENSMUSG00000074129 98.03 1018.58 ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
96. Rps3a1 ENSMUSG00000028081 98.03 1018.58 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
97. Sfpq ENSMUSG00000028820 98.03 1018.58 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
98. Srsf3 ENSMUSG00000071172 98.03 1018.58 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
99. Tmsb4x ENSMUSG00000049775 98.03 1018.58 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
100. Tpm1 ENSMUSG00000032366 98.03 1018.58 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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