Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_2, section s71.

Sample reads: 96,257. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4425.76 45978.35 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 3604.21 37443.43 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Nd4 ENSMUSG00000064363 2908.54 30216.25 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Nd1 ENSMUSG00000064341 2829.04 29390.34 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Co2 ENSMUSG00000064354 2212.88 22989.17 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. Ptma ENSMUSG00000026238 1815.35 18859.31 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
7. mt-Co1 ENSMUSG00000064351 1802.10 18721.66 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Nd2 ENSMUSG00000064345 1219.07 12664.68 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. Actb ENSMUSG00000029580 1086.56 11288.06 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
10. mt-Nd3 ENSMUSG00000064360 1026.93 10668.57 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. mt-Rnr2 ENSMUSG00000064339 960.68 9980.32 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
12. H19 ENSMUSG00000000031 801.67 8328.39 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
13. mt-Co3 ENSMUSG00000064358 748.67 7777.79 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
14. Col1a1 ENSMUSG00000001506 655.91 6814.12 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
15. Eef1a1 ENSMUSG00000037742 649.29 6745.35 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Igf2 ENSMUSG00000048583 576.41 5988.21 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. Gm13340 ENSMUSG00000083563 563.16 5850.56 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
18. mt-Nd5 ENSMUSG00000064367 457.15 4749.24 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
19. Gm10800 ENSMUSG00000075014 404.15 4198.63 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
20. Mdk ENSMUSG00000027239 364.40 3785.68 midkine [Source:MGI Symbol;Acc:MGI:96949]
21. Rpsa ENSMUSG00000032518 364.40 3785.68 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
22. Col3a1 ENSMUSG00000026043 337.89 3510.27 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
23. Tubb5 ENSMUSG00000001525 298.14 3097.32 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
24. Hbb-y ENSMUSG00000052187 284.89 2959.67 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
25. Pkm ENSMUSG00000032294 278.27 2890.89 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
26. Cfl1 ENSMUSG00000056201 271.64 2822.01 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
27. Tuba1b ENSMUSG00000023004 271.64 2822.01 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
28. Rpl4 ENSMUSG00000032399 265.02 2753.24 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
29. Hmga2 ENSMUSG00000056758 238.51 2477.83 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
30. Npm1 ENSMUSG00000057113 238.51 2477.83 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
31. Gm17132 ENSMUSG00000061331 231.89 2409.06 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
32. Rps26 ENSMUSG00000025362 231.89 2409.06 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
33. Rpl18a ENSMUSG00000045128 212.01 2202.53 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
34. Col1a2 ENSMUSG00000029661 205.39 2133.76 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
35. Rpl37 ENSMUSG00000041841 205.39 2133.76 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
36. Rplp1 ENSMUSG00000007892 205.39 2133.76 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
37. mt-Rnr1 ENSMUSG00000064337 205.39 2133.76 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
38. Ubb ENSMUSG00000019505 192.14 1996.10 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
39. Rps5 ENSMUSG00000012848 172.26 1789.58 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
40. Hsp90ab1 ENSMUSG00000023944 165.63 1720.70 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
41. Nedd4 ENSMUSG00000032216 159.01 1651.92 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
42. Rpl32 ENSMUSG00000057841 159.01 1651.92 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
43. Fkbp1a ENSMUSG00000032966 152.38 1583.05 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
44. Rpl39-ps ENSMUSG00000036305 152.38 1583.05 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
45. Rpl41 ENSMUSG00000093674 152.38 1583.05 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
46. Eef1b2 ENSMUSG00000025967 145.76 1514.27 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
47. Gm5805 ENSMUSG00000061848 145.76 1514.27 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
48. Myl6 ENSMUSG00000090841 145.76 1514.27 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
49. Rpl23 ENSMUSG00000071415 145.76 1514.27 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
50. Eif4g2 ENSMUSG00000005610 139.13 1445.39 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
51. Gm21897 ENSMUSG00000094472 139.13 1445.39 predicted gene, 21897 [Source:MGI Symbol;Acc:MGI:5434061]
52. Grb10 ENSMUSG00000020176 139.13 1445.39 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
53. Lamp1 ENSMUSG00000031447 139.13 1445.39 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
54. Rps4x ENSMUSG00000031320 139.13 1445.39 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
55. Tpt1 ENSMUSG00000060126 139.13 1445.39 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
56. Tsc22d1 ENSMUSG00000022010 139.13 1445.39 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
57. Chchd2 ENSMUSG00000070493 132.51 1376.62 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
58. Gm26870 ENSMUSG00000097312 132.51 1376.62 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
59. Hbb-bh1 ENSMUSG00000052217 132.51 1376.62 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
60. Pabpc1 ENSMUSG00000022283 132.51 1376.62 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
61. Rps20 ENSMUSG00000028234 132.51 1376.62 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
62. Trim28 ENSMUSG00000005566 132.51 1376.62 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
63. Ago2 ENSMUSG00000036698 125.88 1307.74 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
64. Banf1 ENSMUSG00000024844 125.88 1307.74 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
65. Hba-a1 ENSMUSG00000069919 125.88 1307.74 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
66. Kpnb1 ENSMUSG00000001440 119.26 1238.97 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
67. Ndufa12 ENSMUSG00000020022 119.26 1238.97 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
68. Ngfrap1 119.26 1238.97 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
69. Peg3 ENSMUSG00000002265 119.26 1238.97 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
70. Sparc ENSMUSG00000018593 119.26 1238.97 secreted acidic cysteine rich glycoprotein [Source:MGI Symbol;Acc:MGI:98373]
71. Eif5a ENSMUSG00000078812 112.63 1170.09 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
72. Gm14303 ENSMUSG00000081344 112.63 1170.09 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
73. Hnrnpa0 ENSMUSG00000007836 112.63 1170.09 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
74. Meg3 ENSMUSG00000021268 112.63 1170.09 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
75. Paics ENSMUSG00000029247 112.63 1170.09 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
76. Rps3a1 ENSMUSG00000028081 112.63 1170.09 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
77. Gm15459 ENSMUSG00000100801 106.01 1101.32 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
78. Hmgn1 ENSMUSG00000040681 106.01 1101.32 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
79. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 106.01 1101.32 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
80. Marcks ENSMUSG00000069662 106.01 1101.32 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
81. Plagl1 ENSMUSG00000019817 106.01 1101.32 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
82. Scd2 ENSMUSG00000025203 106.01 1101.32 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
83. Top2b ENSMUSG00000017485 106.01 1101.32 topoisomerase (DNA) II beta [Source:MGI Symbol;Acc:MGI:98791]
84. U2af2 ENSMUSG00000030435 106.01 1101.32 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
85. Ywhab ENSMUSG00000018326 106.01 1101.32 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
86. Cdk4 ENSMUSG00000006728 99.38 1032.44 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
87. Ddx39b ENSMUSG00000019432 99.38 1032.44 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
88. Gm10073 ENSMUSG00000060019 99.38 1032.44 predicted pseudogene 10073 [Source:MGI Symbol;Acc:MGI:3641908]
89. Gm5963 ENSMUSG00000052192 99.38 1032.44 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
90. Hsp90aa1 ENSMUSG00000021270 99.38 1032.44 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
91. Tecr ENSMUSG00000031708 99.38 1032.44 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
92. Tpm4 ENSMUSG00000031799 99.38 1032.44 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
93. Uqcrq ENSMUSG00000044894 99.38 1032.44 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:MGI Symbol;Acc:MGI:107807]
94. Anp32b ENSMUSG00000028333 92.76 963.67 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
95. Atp5g3 ENSMUSG00000018770 92.76 963.67 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
96. Capns1 ENSMUSG00000001794 92.76 963.67 calpain, small subunit 1 [Source:MGI Symbol;Acc:MGI:88266]
97. Eef2 ENSMUSG00000034994 92.76 963.67 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
98. Hnrnpc ENSMUSG00000060373 92.76 963.67 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
99. Rpl26 ENSMUSG00000060938 92.76 963.67 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
100. Serpinh1 ENSMUSG00000070436 92.76 963.67 serine (or cysteine) peptidase inhibitor, clade H, member 1 [Source:MGI Symbol;Acc:MGI:88283]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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