Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_2, section s69.

Sample reads: 96,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2428.25 25229.36 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Nd1 ENSMUSG00000064341 2428.25 25229.36 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
3. mt-Cytb ENSMUSG00000064370 2075.05 21559.63 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Atp6 ENSMUSG00000064357 1766.00 18348.62 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Rnr2 ENSMUSG00000064339 1721.85 17889.91 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
6. mt-Nd4 ENSMUSG00000064363 1633.55 16972.48 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co2 ENSMUSG00000064354 1456.95 15137.61 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Co1 ENSMUSG00000064351 1059.60 11009.17 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Nd2 ENSMUSG00000064345 971.30 10091.74 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. Actb ENSMUSG00000029580 794.70 8256.88 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Nd3 ENSMUSG00000064360 750.55 7798.17 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. Hmga2 ENSMUSG00000056758 662.25 6880.73 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
13. Eef1a1 ENSMUSG00000037742 573.95 5963.30 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
14. Mdk ENSMUSG00000027239 573.95 5963.30 midkine [Source:MGI Symbol;Acc:MGI:96949]
15. Cfl1 ENSMUSG00000056201 485.65 5045.87 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
16. Rps20 ENSMUSG00000028234 485.65 5045.87 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
17. Tubb5 ENSMUSG00000001525 485.65 5045.87 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
18. Hsp90ab1 ENSMUSG00000023944 441.50 4587.16 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
19. Tuba1b ENSMUSG00000023004 441.50 4587.16 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
20. mt-Co3 ENSMUSG00000064358 441.50 4587.16 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
21. H19 ENSMUSG00000000031 397.35 4128.44 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
22. mt-Rnr1 ENSMUSG00000064337 397.35 4128.44 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
23. Rpl23 ENSMUSG00000071415 353.20 3669.72 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
24. 2810417H13Rik 309.05 3211.01 RIKEN cDNA 2810417H13 gene
25. Anp32b ENSMUSG00000028333 309.05 3211.01 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
26. Hbb-y ENSMUSG00000052187 309.05 3211.01 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
27. Marcks ENSMUSG00000069662 309.05 3211.01 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
28. Rpsa ENSMUSG00000032518 309.05 3211.01 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
29. Anks1 ENSMUSG00000024219 264.90 2752.29 ankyrin repeat and SAM domain containing 1 [Source:MGI Symbol;Acc:MGI:2446180]
30. Atxn7l3b ENSMUSG00000074748 264.90 2752.29 ataxin 7-like 3B [Source:MGI Symbol;Acc:MGI:1914971]
31. Eif5a ENSMUSG00000078812 264.90 2752.29 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
32. Gm10800 ENSMUSG00000075014 264.90 2752.29 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
33. Hnrnpc ENSMUSG00000060373 264.90 2752.29 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
34. Ngfrap1 264.90 2752.29 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
35. Rpl18a ENSMUSG00000045128 264.90 2752.29 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
36. Rpl4 ENSMUSG00000032399 264.90 2752.29 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
37. Son ENSMUSG00000022961 264.90 2752.29 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
38. Ago2 ENSMUSG00000036698 220.75 2293.58 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
39. Hba-a1 ENSMUSG00000069919 220.75 2293.58 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
40. Malat1 ENSMUSG00000092341 220.75 2293.58 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
41. Nedd4 ENSMUSG00000032216 220.75 2293.58 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
42. Nsa2 ENSMUSG00000060739 220.75 2293.58 NSA2 ribosome biogenesis homolog [Source:MGI Symbol;Acc:MGI:1913883]
43. Pkm ENSMUSG00000032294 220.75 2293.58 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
44. Rpl8 ENSMUSG00000003970 220.75 2293.58 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
45. Rps26 ENSMUSG00000025362 220.75 2293.58 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
46. Sfrp1 ENSMUSG00000031548 220.75 2293.58 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
47. Tmed10 ENSMUSG00000021248 220.75 2293.58 transmembrane p24 trafficking protein 10 [Source:MGI Symbol;Acc:MGI:1915831]
48. Tsc22d1 ENSMUSG00000022010 220.75 2293.58 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
49. Uqcrq ENSMUSG00000044894 220.75 2293.58 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:MGI Symbol;Acc:MGI:107807]
50. mt-Nd5 ENSMUSG00000064367 220.75 2293.58 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
51. Alcam ENSMUSG00000022636 176.60 1834.86 activated leukocyte cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1313266]
52. Cct4 ENSMUSG00000007739 176.60 1834.86 chaperonin containing Tcp1, subunit 4 (delta) [Source:MGI Symbol;Acc:MGI:104689]
53. Cnot6 ENSMUSG00000020362 176.60 1834.86 CCR4-NOT transcription complex, subunit 6 [Source:MGI Symbol;Acc:MGI:2144529]
54. Ctbp2 ENSMUSG00000030970 176.60 1834.86 C-terminal binding protein 2 [Source:MGI Symbol;Acc:MGI:1201686]
55. Eif4e ENSMUSG00000028156 176.60 1834.86 eukaryotic translation initiation factor 4E [Source:MGI Symbol;Acc:MGI:95305]
56. Fkbp1a ENSMUSG00000032966 176.60 1834.86 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
57. Gm14303 ENSMUSG00000081344 176.60 1834.86 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
58. Gnb2l1 Gnb2l1 176.60 1834.86
59. Hba-a2 ENSMUSG00000069917 176.60 1834.86 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
60. Hmgn1 ENSMUSG00000040681 176.60 1834.86 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
61. Igf2 ENSMUSG00000048583 176.60 1834.86 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
62. Npm1 ENSMUSG00000057113 176.60 1834.86 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
63. Pdia6 ENSMUSG00000020571 176.60 1834.86 protein disulfide isomerase associated 6 [Source:MGI Symbol;Acc:MGI:1919103]
64. Peg3 ENSMUSG00000002265 176.60 1834.86 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
65. Purb ENSMUSG00000094483 176.60 1834.86 purine rich element binding protein B [Source:MGI Symbol;Acc:MGI:1338779]
66. Qrich1 ENSMUSG00000006673 176.60 1834.86 glutamine-rich 1 [Source:MGI Symbol;Acc:MGI:1916482]
67. Rpl39-ps ENSMUSG00000036305 176.60 1834.86 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
68. Rplp1 ENSMUSG00000007892 176.60 1834.86 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
69. Rps10-ps1 ENSMUSG00000060438 176.60 1834.86 ribosomal protein S10, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644167]
70. Rps16-ps2 ENSMUSG00000060419 176.60 1834.86 ribosomal protein S16, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3704259]
71. Rrm2 ENSMUSG00000020649 176.60 1834.86 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
72. Set ENSMUSG00000054766 176.60 1834.86 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
73. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 176.60 1834.86 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
74. Tead2 ENSMUSG00000030796 176.60 1834.86 TEA domain family member 2 [Source:MGI Symbol;Acc:MGI:104904]
75. Trim28 ENSMUSG00000005566 176.60 1834.86 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
76. U2af2 ENSMUSG00000030435 176.60 1834.86 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
77. Ubb ENSMUSG00000019505 176.60 1834.86 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
78. Atp5g3 ENSMUSG00000018770 132.45 1376.15 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
79. Banf1 ENSMUSG00000024844 132.45 1376.15 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
80. Calm1 ENSMUSG00000001175 132.45 1376.15 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
81. Calm3 ENSMUSG00000019370 132.45 1376.15 calmodulin 3 [Source:MGI Symbol;Acc:MGI:103249]
82. Cbx1 ENSMUSG00000018666 132.45 1376.15 chromobox 1 [Source:MGI Symbol;Acc:MGI:105369]
83. Cd81 ENSMUSG00000037706 132.45 1376.15 CD81 antigen [Source:MGI Symbol;Acc:MGI:1096398]
84. Cdk4 ENSMUSG00000006728 132.45 1376.15 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
85. Cltc ENSMUSG00000047126 132.45 1376.15 clathrin, heavy polypeptide (Hc) [Source:MGI Symbol;Acc:MGI:2388633]
86. Col1a1 ENSMUSG00000001506 132.45 1376.15 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
87. Col1a2 ENSMUSG00000029661 132.45 1376.15 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
88. Cul3 ENSMUSG00000004364 132.45 1376.15 cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
89. Ddx39b ENSMUSG00000019432 132.45 1376.15 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
90. Ddx46 ENSMUSG00000021500 132.45 1376.15 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:MGI Symbol;Acc:MGI:1920895]
91. Dmwd ENSMUSG00000030410 132.45 1376.15 dystrophia myotonica-containing WD repeat motif [Source:MGI Symbol;Acc:MGI:94907]
92. Dnajc8 ENSMUSG00000054405 132.45 1376.15 DnaJ heat shock protein family (Hsp40) member C8 [Source:MGI Symbol;Acc:MGI:1915848]
93. Efemp2 ENSMUSG00000024909 132.45 1376.15 epidermal growth factor-containing fibulin-like extracellular matrix protein 2 [Source:MGI Symbol;Acc:MGI:1891209]
94. Eif4g2 ENSMUSG00000005610 132.45 1376.15 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
95. Eif4h ENSMUSG00000040731 132.45 1376.15 eukaryotic translation initiation factor 4H [Source:MGI Symbol;Acc:MGI:1341822]
96. G3bp1 ENSMUSG00000018583 132.45 1376.15 GTPase activating protein (SH3 domain) binding protein 1 [Source:MGI Symbol;Acc:MGI:1351465]
97. Gm10076 ENSMUSG00000060143 132.45 1376.15 predicted gene 10076 [Source:MGI Symbol;Acc:MGI:3704451]
98. Gm13340 ENSMUSG00000083563 132.45 1376.15 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
99. Gm17132 ENSMUSG00000061331 132.45 1376.15 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
100. Gm5805 ENSMUSG00000061848 132.45 1376.15 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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