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Experiment Mouse_E10_5_slice_2, section s67.

Sample reads: 96,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3542.41 36807.52 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 3169.98 32937.78 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Atp6 ENSMUSG00000064357 2879.83 29922.96 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 2191.27 22768.46 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Nd4 ENSMUSG00000064363 2096.00 21778.55 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Co2 ENSMUSG00000064354 1693.25 17593.77 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. H19 ENSMUSG00000000031 1138.94 11834.19 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
8. Actb ENSMUSG00000029580 1125.95 11699.22 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
9. mt-Co1 ENSMUSG00000064351 1056.66 10979.26 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd3 ENSMUSG00000064360 874.78 9089.43 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. mt-Nd2 ENSMUSG00000064345 749.19 7784.48 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. Mdk ENSMUSG00000027239 645.26 6704.59 midkine [Source:MGI Symbol;Acc:MGI:96949]
13. Eef1a1 ENSMUSG00000037742 606.28 6299.57 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
14. mt-Rnr2 ENSMUSG00000064339 601.95 6254.58 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
15. mt-Co3 ENSMUSG00000064358 571.64 5939.64 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
16. Igf2 ENSMUSG00000048583 506.68 5264.67 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. Pkm ENSMUSG00000032294 467.70 4859.65 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
18. Rpsa ENSMUSG00000032518 368.10 3824.75 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
19. Cfl1 ENSMUSG00000056201 363.77 3779.76 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
20. mt-Nd5 ENSMUSG00000064367 359.44 3734.77 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
21. Rpl4 ENSMUSG00000032399 350.78 3644.79 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
22. Tubb5 ENSMUSG00000001525 346.45 3599.80 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
23. Gm13340 ENSMUSG00000083563 329.12 3419.73 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
24. Tuba1b ENSMUSG00000023004 320.46 3329.75 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
25. Hmga2 ENSMUSG00000056758 316.13 3284.76 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
26. Npm1 ENSMUSG00000057113 281.49 2924.83 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
27. Rpl18a ENSMUSG00000045128 246.84 2564.80 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
28. Rpl23 ENSMUSG00000071415 229.52 2384.83 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
29. Gm10800 ENSMUSG00000075014 225.19 2339.84 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
30. Tpt1 ENSMUSG00000060126 225.19 2339.84 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
31. Eif4g2 ENSMUSG00000005610 220.86 2294.85 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
32. Eif5a ENSMUSG00000078812 212.20 2204.87 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
33. Rps20 ENSMUSG00000028234 203.54 2114.89 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
34. Fkbp1a ENSMUSG00000032966 194.88 2024.91 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
35. Chchd2 ENSMUSG00000070493 190.55 1979.92 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
36. Crabp1 ENSMUSG00000032291 190.55 1979.92 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
37. Rpl41 ENSMUSG00000093674 186.21 1934.82 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
38. Rpl39-ps ENSMUSG00000036305 181.88 1889.83 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
39. Rpl37 ENSMUSG00000041841 173.22 1799.85 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
40. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 160.23 1664.87 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
41. Eef1b2 ENSMUSG00000025967 160.23 1664.87 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
42. Paics ENSMUSG00000029247 160.23 1664.87 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
43. Banf1 ENSMUSG00000024844 155.90 1619.88 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
44. Ubb ENSMUSG00000019505 155.90 1619.88 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
45. Atp5g3 ENSMUSG00000018770 151.57 1574.89 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
46. Hsp90aa1 ENSMUSG00000021270 151.57 1574.89 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
47. Rps26 ENSMUSG00000025362 151.57 1574.89 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
48. Cdk4 ENSMUSG00000006728 147.24 1529.90 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
49. Gm5805 ENSMUSG00000061848 147.24 1529.90 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
50. Trim28 ENSMUSG00000005566 147.24 1529.90 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
51. Rplp1 ENSMUSG00000007892 142.91 1484.91 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
52. Eef2 ENSMUSG00000034994 138.58 1439.92 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
53. Hsp90ab1 ENSMUSG00000023944 138.58 1439.92 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
54. Hnrnpc ENSMUSG00000060373 129.92 1349.94 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
55. Igfbp4 ENSMUSG00000017493 129.92 1349.94 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
56. Lamp1 ENSMUSG00000031447 129.92 1349.94 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
57. mt-Rnr1 ENSMUSG00000064337 129.92 1349.94 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
58. Hnrnpa2b1 ENSMUSG00000004980 121.26 1259.96 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
59. Nedd4 ENSMUSG00000032216 121.26 1259.96 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
60. Rps15 ENSMUSG00000063457 121.26 1259.96 ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:98117]
61. Rps5 ENSMUSG00000012848 121.26 1259.96 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
62. Tecr ENSMUSG00000031708 121.26 1259.96 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
63. Myl6 ENSMUSG00000090841 116.93 1214.96 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
64. Rps3a1 ENSMUSG00000028081 116.93 1214.96 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
65. Set ENSMUSG00000054766 116.93 1214.96 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
66. Sfpq ENSMUSG00000028820 116.93 1214.96 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
67. Ywhae ENSMUSG00000020849 116.93 1214.96 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
68. Eef1g ENSMUSG00000071644 112.59 1169.87 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
69. Sfrp1 ENSMUSG00000031548 112.59 1169.87 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
70. Ybx1 ENSMUSG00000028639 112.59 1169.87 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
71. Cd24a ENSMUSG00000047139 108.26 1124.88 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
72. Col1a1 ENSMUSG00000001506 108.26 1124.88 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
73. Fkbp4 ENSMUSG00000030357 108.26 1124.88 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
74. Gm15459 ENSMUSG00000100801 108.26 1124.88 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
75. Pabpc1 ENSMUSG00000022283 108.26 1124.88 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
76. Ran ENSMUSG00000029430 108.26 1124.88 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
77. Rpl34 ENSMUSG00000062006 108.26 1124.88 ribosomal protein L34 [Source:MGI Symbol;Acc:MGI:1915686]
78. Ago2 ENSMUSG00000036698 103.93 1079.89 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
79. Ldha ENSMUSG00000063229 103.93 1079.89 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
80. Ngfrap1 103.93 1079.89 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
81. Rpl32 ENSMUSG00000057841 103.93 1079.89 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
82. Srsf3 ENSMUSG00000071172 103.93 1079.89 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
83. Capns1 ENSMUSG00000001794 99.60 1034.90 calpain, small subunit 1 [Source:MGI Symbol;Acc:MGI:88266]
84. Ddx39b ENSMUSG00000019432 99.60 1034.90 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
85. Gm14586 ENSMUSG00000083621 99.60 1034.90 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
86. Gm5506 Gm5506 99.60 1034.90
87. Pbx1 ENSMUSG00000052534 99.60 1034.90 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
88. Rpl8 ENSMUSG00000003970 99.60 1034.90 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
89. Rps4x ENSMUSG00000031320 99.60 1034.90 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
90. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 99.60 1034.90 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
91. Ddx5 ENSMUSG00000020719 95.27 989.91 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
92. Elp2 ENSMUSG00000024271 95.27 989.91 elongator acetyltransferase complex subunit 2 [Source:MGI Symbol;Acc:MGI:1889642]
93. Gm14303 ENSMUSG00000081344 95.27 989.91 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
94. Grb10 ENSMUSG00000020176 95.27 989.91 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
95. Ndufa12 ENSMUSG00000020022 95.27 989.91 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
96. Rpl26 ENSMUSG00000060938 95.27 989.91 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
97. Sepw1 95.27 989.91 selenoprotein W, muscle 1
98. Tpm4 ENSMUSG00000031799 95.27 989.91 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
99. Ywhab ENSMUSG00000018326 95.27 989.91 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
100. Anp32b ENSMUSG00000028333 90.94 944.91 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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