Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_2, section s66.

Sample reads: 96,250. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3360.67 34915.96 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 2563.81 26636.92 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 2459.87 25557.02 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 2009.48 20877.66 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Co2 ENSMUSG00000064354 1836.24 19077.77 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd4 ENSMUSG00000064363 1593.72 16558.09 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1281.91 13318.51 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. Hmga2 ENSMUSG00000056758 1108.68 11518.72 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
9. mt-Rnr2 ENSMUSG00000064339 1074.03 11158.72 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
10. mt-Nd2 ENSMUSG00000064345 1039.38 10798.72 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
11. Eef1a1 ENSMUSG00000037742 1004.74 10438.83 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
12. Mdk ENSMUSG00000027239 1004.74 10438.83 midkine [Source:MGI Symbol;Acc:MGI:96949]
13. H19 ENSMUSG00000000031 831.51 8639.04 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
14. Actb ENSMUSG00000029580 796.86 8279.04 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. Gm10800 ENSMUSG00000075014 727.57 7559.15 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
16. mt-Nd5 ENSMUSG00000064367 623.63 6479.26 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
17. mt-Nd3 ENSMUSG00000064360 588.98 6119.26 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
18. Igf2 ENSMUSG00000048583 485.05 5039.47 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
19. Hbb-y ENSMUSG00000052187 450.40 4679.47 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
20. Pkm ENSMUSG00000032294 346.46 3599.57 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
21. mt-Co3 ENSMUSG00000064358 346.46 3599.57 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
22. mt-Rnr1 ENSMUSG00000064337 346.46 3599.57 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
23. Npm1 ENSMUSG00000057113 311.82 3239.68 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
24. Pcdh18 ENSMUSG00000037892 311.82 3239.68 protocadherin 18 [Source:MGI Symbol;Acc:MGI:1920423]
25. Rpl18a ENSMUSG00000045128 311.82 3239.68 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
26. Jarid2 ENSMUSG00000038518 277.17 2879.68 jumonji, AT rich interactive domain 2 [Source:MGI Symbol;Acc:MGI:104813]
27. Cfl1 ENSMUSG00000056201 242.52 2519.68 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
28. Crabp1 ENSMUSG00000032291 242.52 2519.68 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
29. Eif5a ENSMUSG00000078812 242.52 2519.68 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
30. Hba-x ENSMUSG00000055609 242.52 2519.68 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
31. Hnrnpc ENSMUSG00000060373 242.52 2519.68 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
32. Rplp1 ENSMUSG00000007892 242.52 2519.68 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
33. Rps20 ENSMUSG00000028234 242.52 2519.68 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
34. Set ENSMUSG00000054766 242.52 2519.68 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
35. Tubb5 ENSMUSG00000001525 242.52 2519.68 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
36. Ubb ENSMUSG00000019505 242.52 2519.68 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
37. Anp32b ENSMUSG00000028333 207.88 2159.79 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
38. Col1a1 ENSMUSG00000001506 207.88 2159.79 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
39. Ddx5 ENSMUSG00000020719 207.88 2159.79 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
40. Gm13340 ENSMUSG00000083563 207.88 2159.79 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
41. Gm26870 ENSMUSG00000097312 207.88 2159.79 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
42. Gm5805 ENSMUSG00000061848 207.88 2159.79 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
43. Hsp90aa1 ENSMUSG00000021270 207.88 2159.79 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
44. Hsp90ab1 ENSMUSG00000023944 207.88 2159.79 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
45. Peg3 ENSMUSG00000002265 207.88 2159.79 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
46. Rpl23 ENSMUSG00000071415 207.88 2159.79 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
47. Rpsa ENSMUSG00000032518 207.88 2159.79 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
48. Sfrp1 ENSMUSG00000031548 207.88 2159.79 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
49. Tuba1b ENSMUSG00000023004 207.88 2159.79 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
50. Ddx39b ENSMUSG00000019432 173.23 1799.79 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
51. Dlk1 ENSMUSG00000040856, ENSMUSG00000098411 173.23 1799.79 delta like non-canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:94900]
52. Eef1b2 ENSMUSG00000025967 173.23 1799.79 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
53. Hba-a2 ENSMUSG00000069917 173.23 1799.79 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
54. Itga6 ENSMUSG00000027111 173.23 1799.79 integrin alpha 6 [Source:MGI Symbol;Acc:MGI:96605]
55. Marcks ENSMUSG00000069662 173.23 1799.79 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
56. Ngfrap1 173.23 1799.79 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
57. Pbx1 ENSMUSG00000052534 173.23 1799.79 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
58. Rpl37 ENSMUSG00000041841 173.23 1799.79 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
59. Rps26 ENSMUSG00000025362 173.23 1799.79 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
60. Rps3a1 ENSMUSG00000028081 173.23 1799.79 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
61. Ywhag ENSMUSG00000051391 173.23 1799.79 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide [Source:MGI Symbol;Acc:MGI:108109]
62. Add1 ENSMUSG00000029106 138.58 1439.79 adducin 1 (alpha) [Source:MGI Symbol;Acc:MGI:87918]
63. Ago2 ENSMUSG00000036698 138.58 1439.79 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
64. Atp5b ENSMUSG00000025393 138.58 1439.79 ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit [Source:MGI Symbol;Acc:MGI:107801]
65. Calm1 ENSMUSG00000001175 138.58 1439.79 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
66. Cdk4 ENSMUSG00000006728 138.58 1439.79 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
67. Ddx3x ENSMUSG00000000787 138.58 1439.79 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
68. Dynlrb1 ENSMUSG00000047459 138.58 1439.79 dynein light chain roadblock-type 1 [Source:MGI Symbol;Acc:MGI:1914318]
69. Gm10073 ENSMUSG00000060019 138.58 1439.79 predicted pseudogene 10073 [Source:MGI Symbol;Acc:MGI:3641908]
70. Gm15459 ENSMUSG00000100801 138.58 1439.79 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
71. Grb10 ENSMUSG00000020176 138.58 1439.79 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
72. Hba-a1 ENSMUSG00000069919 138.58 1439.79 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
73. Igfbp4 ENSMUSG00000017493 138.58 1439.79 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
74. Lpp ENSMUSG00000033306 138.58 1439.79 LIM domain containing preferred translocation partner in lipoma [Source:MGI Symbol;Acc:MGI:2441849]
75. Marcksl1 ENSMUSG00000047945 138.58 1439.79 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
76. Ncdn ENSMUSG00000028833 138.58 1439.79 neurochondrin [Source:MGI Symbol;Acc:MGI:1347351]
77. Ndufa6 ENSMUSG00000022450 138.58 1439.79 NADH:ubiquinone oxidoreductase subunit A6 [Source:MGI Symbol;Acc:MGI:1914380]
78. Nedd4 ENSMUSG00000032216 138.58 1439.79 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
79. Nme1 ENSMUSG00000037601 138.58 1439.79 NME/NM23 nucleoside diphosphate kinase 1 [Source:MGI Symbol;Acc:MGI:97355]
80. Paics ENSMUSG00000029247 138.58 1439.79 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
81. Pcbp1 ENSMUSG00000051695 138.58 1439.79 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
82. Rpl4 ENSMUSG00000032399 138.58 1439.79 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
83. Rps4x ENSMUSG00000031320 138.58 1439.79 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
84. Rspo4 ENSMUSG00000032852 138.58 1439.79 R-spondin 4 [Source:MGI Symbol;Acc:MGI:1924467]
85. Top1 ENSMUSG00000070544 138.58 1439.79 topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
86. Tpt1 ENSMUSG00000060126 138.58 1439.79 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
87. Tuba1a ENSMUSG00000072235 138.58 1439.79 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
88. U2surp ENSMUSG00000032407 138.58 1439.79 U2 snRNP-associated SURP domain containing [Source:MGI Symbol;Acc:MGI:1915208]
89. Ywhab ENSMUSG00000018326 138.58 1439.79 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
90. 1110008P14Rik ENSMUSG00000039195 103.94 1079.89 RIKEN cDNA 1110008P14 gene [Source:MGI Symbol;Acc:MGI:1920987]
91. Actn1 ENSMUSG00000015143 103.94 1079.89 actinin, alpha 1 [Source:MGI Symbol;Acc:MGI:2137706]
92. Adi1 ENSMUSG00000020629 103.94 1079.89 acireductone dioxygenase 1 [Source:MGI Symbol;Acc:MGI:2144929]
93. Aldh1a2 ENSMUSG00000013584 103.94 1079.89 aldehyde dehydrogenase family 1, subfamily A2 [Source:MGI Symbol;Acc:MGI:107928]
94. Banf1 ENSMUSG00000024844 103.94 1079.89 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
95. Calr ENSMUSG00000003814 103.94 1079.89 calreticulin [Source:MGI Symbol;Acc:MGI:88252]
96. Canx ENSMUSG00000020368 103.94 1079.89 calnexin [Source:MGI Symbol;Acc:MGI:88261]
97. Ccni ENSMUSG00000063015 103.94 1079.89 cyclin I [Source:MGI Symbol;Acc:MGI:1341077]
98. Cct7 ENSMUSG00000030007 103.94 1079.89 chaperonin containing Tcp1, subunit 7 (eta) [Source:MGI Symbol;Acc:MGI:107184]
99. Cd2ap ENSMUSG00000061665 103.94 1079.89 CD2-associated protein [Source:MGI Symbol;Acc:MGI:1330281]
100. Cks2 ENSMUSG00000062248 103.94 1079.89 CDC28 protein kinase regulatory subunit 2 [Source:MGI Symbol;Acc:MGI:1913447]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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