Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_2, section s65.

Sample reads: 96,249. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 2631.93 27357.92 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Rnr2 ENSMUSG00000064339 2268.90 23584.36 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
3. mt-Co2 ENSMUSG00000064354 2132.77 22169.34 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
4. mt-Cytb ENSMUSG00000064370 1769.75 18395.89 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
5. mt-Atp6 ENSMUSG00000064357 1724.37 17924.18 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
6. mt-Nd1 ENSMUSG00000064341 1633.61 16980.76 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. Actb ENSMUSG00000029580 1452.10 15094.03 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
8. mt-Nd4 ENSMUSG00000064363 1089.07 11320.47 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
9. Hmga2 ENSMUSG00000056758 1043.70 10848.87 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
10. Hbb-y ENSMUSG00000052187 952.94 9905.45 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
11. mt-Nd2 ENSMUSG00000064345 816.81 8490.43 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. Mdk ENSMUSG00000027239 589.92 6132.00 midkine [Source:MGI Symbol;Acc:MGI:96949]
13. Npm1 ENSMUSG00000057113 544.54 5660.29 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
14. mt-Co1 ENSMUSG00000064351 544.54 5660.29 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
15. Cfl1 ENSMUSG00000056201 499.16 5188.58 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
16. Eef1a1 ENSMUSG00000037742 499.16 5188.58 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
17. Igf2 ENSMUSG00000048583 499.16 5188.58 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
18. mt-Nd3 ENSMUSG00000064360 499.16 5188.58 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
19. H19 ENSMUSG00000000031 453.78 4716.87 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
20. mt-Nd5 ENSMUSG00000064367 453.78 4716.87 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
21. Gm10800 ENSMUSG00000075014 408.40 4245.16 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
22. Ago2 ENSMUSG00000036698 363.02 3773.46 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
23. Gm13340 ENSMUSG00000083563 363.02 3773.46 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
24. Hsp90ab1 ENSMUSG00000023944 363.02 3773.46 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
25. Chchd2 ENSMUSG00000070493 317.65 3301.85 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
26. Eef1b2 ENSMUSG00000025967 317.65 3301.85 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
27. Pbx1 ENSMUSG00000052534 317.65 3301.85 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
28. Rpl4 ENSMUSG00000032399 317.65 3301.85 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
29. Tuba1b ENSMUSG00000023004 317.65 3301.85 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
30. Tubb5 ENSMUSG00000001525 317.65 3301.85 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
31. mt-Rnr1 ENSMUSG00000064337 317.65 3301.85 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
32. Atp5g3 ENSMUSG00000018770 272.27 2830.14 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
33. Rpl18a ENSMUSG00000045128 272.27 2830.14 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
34. Rpl23 ENSMUSG00000071415 272.27 2830.14 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
35. U2af2 ENSMUSG00000030435 272.27 2830.14 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
36. Arid1a ENSMUSG00000007880 226.89 2358.44 AT rich interactive domain 1A (SWI-like) [Source:MGI Symbol;Acc:MGI:1935147]
37. Eif5a ENSMUSG00000078812 226.89 2358.44 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
38. Fkbp1a ENSMUSG00000032966 226.89 2358.44 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
39. Gm14586 ENSMUSG00000083621 226.89 2358.44 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
40. Hba-a1 ENSMUSG00000069919 226.89 2358.44 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
41. Nedd4 ENSMUSG00000032216 226.89 2358.44 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
42. Pabpc1 ENSMUSG00000022283 226.89 2358.44 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
43. Set ENSMUSG00000054766 226.89 2358.44 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
44. Sfpq ENSMUSG00000028820 226.89 2358.44 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
45. Tnrc6a ENSMUSG00000052707 226.89 2358.44 trinucleotide repeat containing 6a [Source:MGI Symbol;Acc:MGI:2385292]
46. Tpm1 ENSMUSG00000032366 226.89 2358.44 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
47. mt-Co3 ENSMUSG00000064358 226.89 2358.44 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
48. Akap8 ENSMUSG00000024045 181.51 1886.73 A kinase (PRKA) anchor protein 8 [Source:MGI Symbol;Acc:MGI:1928488]
49. Anp32e ENSMUSG00000015749 181.51 1886.73 acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:MGI Symbol;Acc:MGI:1913721]
50. Arpc2 ENSMUSG00000006304 181.51 1886.73 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
51. Atp2a2 ENSMUSG00000029467 181.51 1886.73 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 [Source:MGI Symbol;Acc:MGI:88110]
52. Calm3 ENSMUSG00000019370 181.51 1886.73 calmodulin 3 [Source:MGI Symbol;Acc:MGI:103249]
53. Gm10275 ENSMUSG00000069682 181.51 1886.73 predicted pseudogene 10275 [Source:MGI Symbol;Acc:MGI:3704354]
54. Gm17132 ENSMUSG00000061331 181.51 1886.73 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
55. Gm5963 ENSMUSG00000052192 181.51 1886.73 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
56. Gm9846 Gm9846 181.51 1886.73
57. H2afy ENSMUSG00000015937 181.51 1886.73 H2A histone family, member Y [Source:MGI Symbol;Acc:MGI:1349392]
58. Hba-a2 ENSMUSG00000069917 181.51 1886.73 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
59. Hba-x ENSMUSG00000055609 181.51 1886.73 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
60. Malat1 ENSMUSG00000092341 181.51 1886.73 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
61. Mapre1 ENSMUSG00000027479 181.51 1886.73 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
62. Pbx3 ENSMUSG00000038718 181.51 1886.73 pre B cell leukemia homeobox 3 [Source:MGI Symbol;Acc:MGI:97496]
63. Pcdh18 ENSMUSG00000037892 181.51 1886.73 protocadherin 18 [Source:MGI Symbol;Acc:MGI:1920423]
64. Pkm ENSMUSG00000032294 181.51 1886.73 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
65. Rpl26 ENSMUSG00000060938 181.51 1886.73 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
66. Rpl39-ps ENSMUSG00000036305 181.51 1886.73 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
67. Rplp1 ENSMUSG00000007892 181.51 1886.73 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
68. Rps10-ps1 ENSMUSG00000060438 181.51 1886.73 ribosomal protein S10, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644167]
69. Rps20 ENSMUSG00000028234 181.51 1886.73 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
70. Rps26 ENSMUSG00000025362 181.51 1886.73 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
71. Rpsa ENSMUSG00000032518 181.51 1886.73 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
72. Tpt1 ENSMUSG00000060126 181.51 1886.73 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
73. Ywhab ENSMUSG00000018326 181.51 1886.73 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
74. Add1 ENSMUSG00000029106 136.13 1415.02 adducin 1 (alpha) [Source:MGI Symbol;Acc:MGI:87918]
75. Akt1 ENSMUSG00000001729 136.13 1415.02 thymoma viral proto-oncogene 1 [Source:MGI Symbol;Acc:MGI:87986]
76. Arl2 ENSMUSG00000024944 136.13 1415.02 ADP-ribosylation factor-like 2 [Source:MGI Symbol;Acc:MGI:1928393]
77. Armc1 ENSMUSG00000027599 136.13 1415.02 armadillo repeat containing 1 [Source:MGI Symbol;Acc:MGI:1921502]
78. Atp5o ENSMUSG00000022956, ENSMUSG00000116933 136.13 1415.02 ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit [Source:MGI Symbol;Acc:MGI:106341]
79. Ccar2 ENSMUSG00000033712 136.13 1415.02 cell cycle activator and apoptosis regulator 2 [Source:MGI Symbol;Acc:MGI:2444228]
80. Cdc34 ENSMUSG00000020307 136.13 1415.02 cell division cycle 34 [Source:MGI Symbol;Acc:MGI:102657]
81. Col1a1 ENSMUSG00000001506 136.13 1415.02 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
82. Col1a2 ENSMUSG00000029661 136.13 1415.02 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
83. Crabp1 ENSMUSG00000032291 136.13 1415.02 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
84. Eif4g2 ENSMUSG00000005610 136.13 1415.02 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
85. Eif4h ENSMUSG00000040731 136.13 1415.02 eukaryotic translation initiation factor 4H [Source:MGI Symbol;Acc:MGI:1341822]
86. Eri3 ENSMUSG00000033423 136.13 1415.02 exoribonuclease 3 [Source:MGI Symbol;Acc:MGI:2153887]
87. Fn1 ENSMUSG00000026193 136.13 1415.02 fibronectin 1 [Source:MGI Symbol;Acc:MGI:95566]
88. Gm13936 ENSMUSG00000085444 136.13 1415.02 predicted gene 13936 [Source:MGI Symbol;Acc:MGI:3651878]
89. Gm2000 ENSMUSG00000078193 136.13 1415.02 predicted gene 2000 [Source:MGI Symbol;Acc:MGI:3780170]
90. Gm26924 Gm26924 136.13 1415.02
91. Gm9844 ENSMUSG00000091955 136.13 1415.02 predicted pseudogene 9844 [Source:MGI Symbol;Acc:MGI:3704288]
92. Grb10 ENSMUSG00000020176 136.13 1415.02 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
93. Hcfc1 ENSMUSG00000031386 136.13 1415.02 host cell factor C1 [Source:MGI Symbol;Acc:MGI:105942]
94. Hdgfrp3 136.13 1415.02 hepatoma-derived growth factor, related protein 3
95. Hmgn1 ENSMUSG00000040681 136.13 1415.02 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
96. Hnrnpc ENSMUSG00000060373 136.13 1415.02 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
97. Hoxa5 ENSMUSG00000038253 136.13 1415.02 homeobox A5 [Source:MGI Symbol;Acc:MGI:96177]
98. Hoxc8 ENSMUSG00000001657 136.13 1415.02 homeobox C8 [Source:MGI Symbol;Acc:MGI:96198]
99. Ipo9 ENSMUSG00000041879 136.13 1415.02 importin 9 [Source:MGI Symbol;Acc:MGI:1918944]
100. Kpnb1 ENSMUSG00000001440 136.13 1415.02 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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