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Experiment Mouse_E10_5_slice_2, section s60.

Sample reads: 96,235. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3286.42 34150.06 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 3247.44 33745.01 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 2189.77 22754.48 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 1823.03 18943.59 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Co2 ENSMUSG00000064354 1759.25 18280.83 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd4 ENSMUSG00000064363 1727.36 17949.45 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1112.60 11561.32 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. Actb ENSMUSG00000029580 970.87 10088.57 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
9. mt-Rnr2 ENSMUSG00000064339 901.77 9370.53 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
10. Mdk ENSMUSG00000027239 781.30 8118.69 midkine [Source:MGI Symbol;Acc:MGI:96949]
11. H19 ENSMUSG00000000031 703.35 7308.70 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
12. Hbb-y ENSMUSG00000052187 701.58 7290.30 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
13. Igf2 ENSMUSG00000048583 676.77 7032.50 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
14. mt-Nd2 ENSMUSG00000064345 667.91 6940.43 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
15. mt-Nd3 ENSMUSG00000064360 611.22 6351.35 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
16. Eef1a1 ENSMUSG00000037742 581.10 6038.36 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
17. Hmga2 ENSMUSG00000056758 496.06 5154.69 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
18. mt-Co3 ENSMUSG00000064358 426.97 4436.76 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
19. Rpsa ENSMUSG00000032518 386.22 4013.31 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
20. Npm1 ENSMUSG00000057113 359.65 3737.22 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. Pkm ENSMUSG00000032294 352.56 3663.54 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
22. Gm13340 ENSMUSG00000083563 343.70 3571.48 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
23. mt-Nd5 ENSMUSG00000064367 327.76 3405.84 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
24. Cfl1 ENSMUSG00000056201 317.13 3295.38 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
25. Tubb5 ENSMUSG00000001525 299.41 3111.25 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
26. Hbb-bh1 ENSMUSG00000052217 278.15 2890.33 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
27. Gm10800 ENSMUSG00000075014 274.61 2853.55 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
28. Hba-a1 ENSMUSG00000069919 255.12 2651.02 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
29. Tpt1 ENSMUSG00000060126 242.72 2522.17 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
30. Tuba1b ENSMUSG00000023004 235.63 2448.49 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
31. Atp5g3 ENSMUSG00000018770 233.86 2430.10 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
32. Hba-x ENSMUSG00000055609 228.54 2374.82 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
33. Hsp90ab1 ENSMUSG00000023944 228.54 2374.82 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
34. U2af2 ENSMUSG00000030435 214.37 2227.58 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
35. Chchd2 ENSMUSG00000070493 212.60 2209.18 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
36. mt-Rnr1 ENSMUSG00000064337 209.06 2172.40 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
37. Rps26 ENSMUSG00000025362 203.74 2117.12 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
38. Grb10 ENSMUSG00000020176 200.20 2080.33 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
39. Rpl18a ENSMUSG00000045128 194.88 2025.05 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
40. Set ENSMUSG00000054766 193.11 2006.66 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
41. Hnrnpc ENSMUSG00000060373 189.57 1969.87 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
42. Rpl23 ENSMUSG00000071415 186.02 1932.98 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
43. Rpl4 ENSMUSG00000032399 186.02 1932.98 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
44. Crabp1 ENSMUSG00000032291 182.48 1896.20 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
45. Rpl37 ENSMUSG00000041841 182.48 1896.20 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
46. Ywhab ENSMUSG00000018326 182.48 1896.20 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
47. Eif5a ENSMUSG00000078812 173.62 1804.13 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
48. Nedd4 ENSMUSG00000032216 173.62 1804.13 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
49. Ago2 ENSMUSG00000036698 171.85 1785.74 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
50. Pbx1 ENSMUSG00000052534 171.85 1785.74 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
51. Eif4g2 ENSMUSG00000005610 164.76 1712.06 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
52. Fkbp1a ENSMUSG00000032966 161.22 1675.28 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
53. Eef1b2 ENSMUSG00000025967 159.45 1656.89 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
54. Ubb ENSMUSG00000019505 159.45 1656.89 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
55. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 154.13 1601.61 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
56. Sfrp1 ENSMUSG00000031548 154.13 1601.61 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
57. Hba-a2 ENSMUSG00000069917 150.59 1564.82 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
58. Trim28 ENSMUSG00000005566 148.82 1546.43 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
59. Rps20 ENSMUSG00000028234 147.05 1528.04 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
60. Pcbp1 ENSMUSG00000051695 145.28 1509.64 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
61. Ran ENSMUSG00000029430 141.73 1472.75 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
62. Banf1 ENSMUSG00000024844 138.19 1435.97 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
63. Col1a1 ENSMUSG00000001506 138.19 1435.97 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
64. Lamp1 ENSMUSG00000031447 138.19 1435.97 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
65. Ybx1 ENSMUSG00000028639 138.19 1435.97 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
66. Ngfrap1 134.65 1399.18 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
67. Gm5805 ENSMUSG00000061848 132.87 1380.69 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
68. Rplp1 ENSMUSG00000007892 131.10 1362.29 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
69. Pabpc1 ENSMUSG00000022283 129.33 1343.90 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
70. Cox8a ENSMUSG00000035885 127.56 1325.51 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
71. Peg3 ENSMUSG00000002265 125.79 1307.12 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
72. Gm14303 ENSMUSG00000081344 124.02 1288.72 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
73. Gpc3 ENSMUSG00000055653 124.02 1288.72 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
74. Rps4x ENSMUSG00000031320 124.02 1288.72 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
75. Rrm2 ENSMUSG00000020649 122.24 1270.23 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
76. Ndufa12 ENSMUSG00000020022 118.70 1233.44 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
77. Paics ENSMUSG00000029247 118.70 1233.44 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
78. Wbp5 118.70 1233.44 WW domain binding protein 5
79. Rpl32 ENSMUSG00000057841 115.16 1196.66 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
80. Rpl39-ps ENSMUSG00000036305 115.16 1196.66 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
81. Col3a1 ENSMUSG00000026043 113.39 1178.27 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
82. Rps5 ENSMUSG00000012848 109.84 1141.38 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
83. Anp32b ENSMUSG00000028333 108.07 1122.98 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
84. Gm10073 ENSMUSG00000060019 108.07 1122.98 predicted pseudogene 10073 [Source:MGI Symbol;Acc:MGI:3641908]
85. Hsp90aa1 ENSMUSG00000021270 108.07 1122.98 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
86. Hmgn1 ENSMUSG00000040681 106.30 1104.59 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
87. Tecr ENSMUSG00000031708 106.30 1104.59 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
88. 2810417H13Rik 104.53 1086.20 RIKEN cDNA 2810417H13 gene
89. Rpl8 ENSMUSG00000003970 104.53 1086.20 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
90. Gm17132 ENSMUSG00000061331 100.98 1049.31 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
91. Rps3a1 ENSMUSG00000028081 100.98 1049.31 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
92. Cdk4 ENSMUSG00000006728 97.44 1012.52 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
93. Igfbp4 ENSMUSG00000017493 95.67 994.13 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
94. Marcksl1 ENSMUSG00000047945 95.67 994.13 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
95. Myl6 ENSMUSG00000090841 95.67 994.13 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
96. Dcakd ENSMUSG00000020935 93.90 975.74 dephospho-CoA kinase domain containing [Source:MGI Symbol;Acc:MGI:1915337]
97. Jund ENSMUSG00000071076, ENSMUSG00000110974 93.90 975.74 jun D proto-oncogene [Source:MGI Symbol;Acc:MGI:96648]
98. Marcks ENSMUSG00000069662 93.90 975.74 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
99. Arid1a ENSMUSG00000007880 92.13 957.35 AT rich interactive domain 1A (SWI-like) [Source:MGI Symbol;Acc:MGI:1935147]
100. Gm14586 ENSMUSG00000083621 92.13 957.35 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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