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Experiment Mouse_E10_5_slice_2, section s45.

Sample reads: 96,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4591.27 47703.36 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 2975.48 30915.28 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. Ptma ENSMUSG00000026238 2813.68 29234.17 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
4. mt-Co2 ENSMUSG00000064354 2718.63 28246.60 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd1 ENSMUSG00000064341 2684.31 27890.02 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Nd4 ENSMUSG00000064363 2462.91 25589.67 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1254.84 13037.80 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Nd2 ENSMUSG00000064345 1104.73 11478.16 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Rnr2 ENSMUSG00000064339 1060.97 11023.49 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
10. Actb ENSMUSG00000029580 974.60 10126.11 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Nd3 ENSMUSG00000064360 961.78 9992.91 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. H19 ENSMUSG00000000031 844.10 8770.21 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
13. Mdk ENSMUSG00000027239 620.44 6446.38 midkine [Source:MGI Symbol;Acc:MGI:96949]
14. Eef1a1 ENSMUSG00000037742 606.86 6305.28 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. mt-Co3 ENSMUSG00000064358 534.82 5556.79 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
16. mt-Nd5 ENSMUSG00000064367 468.82 4871.05 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
17. Hmga2 ENSMUSG00000056758 456.00 4737.85 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
18. Igf2 ENSMUSG00000048583 423.94 4404.74 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
19. Rpsa ENSMUSG00000032518 411.87 4279.33 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
20. Gm13340 ENSMUSG00000083563 382.07 3969.71 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
21. Cfl1 ENSMUSG00000056201 375.66 3903.11 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
22. Pkm ENSMUSG00000032294 361.33 3754.22 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
23. Hbb-y ENSMUSG00000052187 341.34 3546.53 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
24. Tubb5 ENSMUSG00000001525 312.67 3248.65 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
25. Tuba1b ENSMUSG00000023004 284.38 2954.71 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
26. Npm1 ENSMUSG00000057113 250.44 2602.07 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
27. Gm10800 ENSMUSG00000075014 227.81 2366.95 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
28. Hnrnpc ENSMUSG00000060373 211.97 2202.37 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
29. Rps26 ENSMUSG00000025362 194.62 2022.10 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
30. Tpt1 ENSMUSG00000060126 193.86 2014.21 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
31. Nedd4 ENSMUSG00000032216 193.11 2006.42 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
32. Rpl4 ENSMUSG00000032399 192.73 2002.47 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
33. Eif5a ENSMUSG00000078812 184.06 1912.39 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
34. Grb10 ENSMUSG00000020176 179.53 1865.32 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
35. Ubb ENSMUSG00000019505 176.14 1830.10 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
36. mt-Rnr1 ENSMUSG00000064337 170.86 1775.24 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
37. Fkbp1a ENSMUSG00000032966 166.33 1728.17 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
38. Hsp90aa1 ENSMUSG00000021270 165.58 1720.38 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
39. Ywhab ENSMUSG00000018326 163.69 1700.74 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
40. Hsp90ab1 ENSMUSG00000023944 163.31 1696.79 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
41. Rps20 ENSMUSG00000028234 163.31 1696.79 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
42. Rpl18a ENSMUSG00000045128 161.05 1673.31 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
43. Eif4g2 ENSMUSG00000005610 160.67 1669.36 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
44. Chchd2 ENSMUSG00000070493 154.64 1606.71 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
45. Set ENSMUSG00000054766 154.64 1606.71 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
46. Rplp1 ENSMUSG00000007892 150.11 1559.64 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
47. Banf1 ENSMUSG00000024844 143.32 1489.10 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
48. U2af2 ENSMUSG00000030435 142.95 1485.25 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
49. Atp5g3 ENSMUSG00000018770 139.55 1449.93 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
50. Pbx1 ENSMUSG00000052534 138.80 1442.13 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
51. Rpl37 ENSMUSG00000041841 136.53 1418.55 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
52. Rrm2 ENSMUSG00000020649 136.53 1418.55 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
53. Tecr ENSMUSG00000031708 133.14 1383.33 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
54. Trim28 ENSMUSG00000005566 132.76 1379.38 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
55. Eef1b2 ENSMUSG00000025967 131.25 1363.69 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
56. Ran ENSMUSG00000029430 131.25 1363.69 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
57. Rpl23 ENSMUSG00000071415 130.12 1351.95 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
58. Myl6 ENSMUSG00000090841 127.11 1320.67 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
59. Ngfrap1 123.71 1285.35 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
60. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 123.71 1285.35 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
61. Gm5805 ENSMUSG00000061848 119.56 1242.23 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
62. Paics ENSMUSG00000029247 118.43 1230.49 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
63. Gm14303 ENSMUSG00000081344 109.00 1132.51 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
64. Hmgn1 ENSMUSG00000040681 109.00 1132.51 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
65. Pabpc1 ENSMUSG00000022283 105.98 1101.13 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
66. Cox8a ENSMUSG00000035885 105.23 1093.34 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
67. Ago2 ENSMUSG00000036698 104.85 1089.39 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
68. Hba-a1 ENSMUSG00000069919 104.85 1089.39 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
69. Rps4x ENSMUSG00000031320 104.10 1081.60 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
70. Ndufa12 ENSMUSG00000020022 103.34 1073.70 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
71. Ybx1 ENSMUSG00000028639 103.34 1073.70 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
72. 2810417H13Rik 102.97 1069.86 RIKEN cDNA 2810417H13 gene
73. Peg3 ENSMUSG00000002265 101.46 1054.17 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
74. Rpl32 ENSMUSG00000057841 99.95 1038.48 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
75. Rpl8 ENSMUSG00000003970 98.44 1022.79 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
76. Itga6 ENSMUSG00000027111 97.31 1011.05 integrin alpha 6 [Source:MGI Symbol;Acc:MGI:96605]
77. Wbp5 97.31 1011.05 WW domain binding protein 5
78. Rpl39-ps ENSMUSG00000036305 95.42 991.42 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
79. Rps5 ENSMUSG00000012848 95.05 987.57 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
80. Hbb-bh1 ENSMUSG00000052217 94.67 983.62 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
81. Rps3a1 ENSMUSG00000028081 94.67 983.62 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
82. Gm14586 ENSMUSG00000083621 90.52 940.50 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
83. Sub1 ENSMUSG00000022205 90.52 940.50 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
84. Gm15459 ENSMUSG00000100801 90.14 936.56 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
85. Pcbp1 ENSMUSG00000051695 90.14 936.56 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
86. Anp32b ENSMUSG00000028333 89.01 924.82 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
87. Eef2 ENSMUSG00000034994 89.01 924.82 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
88. Col3a1 ENSMUSG00000026043 87.50 909.13 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
89. Lamp1 ENSMUSG00000031447 87.50 909.13 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
90. Cdk4 ENSMUSG00000006728 85.99 893.44 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
91. Hnrnpa2b1 ENSMUSG00000004980 84.86 881.70 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
92. Fkbp4 ENSMUSG00000030357 84.11 873.90 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
93. Son ENSMUSG00000022961 82.98 862.16 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
94. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 82.22 854.27 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
95. Srsf3 ENSMUSG00000071172 82.22 854.27 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
96. Ddx39b ENSMUSG00000019432 81.47 846.47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
97. Ldha ENSMUSG00000063229 81.47 846.47 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
98. Tpm4 ENSMUSG00000031799 81.09 842.53 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
99. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 80.34 834.73 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
100. Gm5963 ENSMUSG00000052192 79.58 826.84 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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