Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_2, section s44.

Sample reads: 96,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 5354.90 55636.98 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 3378.49 35102.24 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Nd1 ENSMUSG00000064341 3185.62 33098.33 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. Ptma ENSMUSG00000026238 2968.64 30843.93 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
5. mt-Co2 ENSMUSG00000064354 2936.03 30505.11 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd4 ENSMUSG00000064363 2857.08 29684.83 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1326.91 13786.49 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Nd2 ENSMUSG00000064345 1247.02 12956.44 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Nd3 ENSMUSG00000064360 972.85 10107.83 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. mt-Rnr2 ENSMUSG00000064339 905.72 9410.36 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
11. Actb ENSMUSG00000029580 862.70 8963.38 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. H19 ENSMUSG00000000031 714.74 7426.09 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
13. Hmga2 ENSMUSG00000056758 610.27 6340.66 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
14. Mdk ENSMUSG00000027239 585.22 6080.39 midkine [Source:MGI Symbol;Acc:MGI:96949]
15. Eef1a1 ENSMUSG00000037742 572.46 5947.81 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. mt-Co3 ENSMUSG00000064358 556.38 5780.74 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
17. mt-Nd5 ENSMUSG00000064367 426.86 4435.04 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
18. Gm13340 ENSMUSG00000083563 409.37 4253.32 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
19. Rpsa ENSMUSG00000032518 404.64 4204.18 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
20. Igf2 ENSMUSG00000048583 369.19 3835.85 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
21. Npm1 ENSMUSG00000057113 279.85 2907.62 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
22. Pkm ENSMUSG00000032294 260.94 2711.15 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
23. Tubb5 ENSMUSG00000001525 254.79 2647.25 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
24. Cfl1 ENSMUSG00000056201 249.59 2593.22 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
25. Tuba1b ENSMUSG00000023004 242.97 2524.44 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
26. Hbb-y ENSMUSG00000052187 228.32 2372.23 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
27. Hnrnpc ENSMUSG00000060373 213.19 2215.03 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
28. mt-Rnr1 ENSMUSG00000064337 198.54 2062.81 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
29. Rpl4 ENSMUSG00000032399 196.65 2043.18 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
30. Rps26 ENSMUSG00000025362 193.34 2008.79 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
31. Nedd4 ENSMUSG00000032216 190.03 1974.40 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
32. Rps20 ENSMUSG00000028234 189.09 1964.63 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
33. Eif4g2 ENSMUSG00000005610 185.30 1925.25 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
34. Rpl18a ENSMUSG00000045128 178.21 1851.59 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
35. Ywhab ENSMUSG00000018326 177.27 1841.82 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
36. Pbx1 ENSMUSG00000052534 172.54 1792.68 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
37. Set ENSMUSG00000054766 171.12 1777.92 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
38. Tpt1 ENSMUSG00000060126 167.81 1743.53 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
39. Ngfrap1 166.40 1728.88 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
40. Ubb ENSMUSG00000019505 160.25 1664.98 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
41. Grb10 ENSMUSG00000020176 158.83 1650.23 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
42. Hsp90ab1 ENSMUSG00000023944 154.58 1606.07 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
43. Rplp1 ENSMUSG00000007892 152.21 1581.45 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
44. Eif5a ENSMUSG00000078812 151.74 1576.57 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
45. Gm10800 ENSMUSG00000075014 148.43 1542.18 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
46. Chchd2 ENSMUSG00000070493 147.49 1532.41 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
47. Rrm2 ENSMUSG00000020649 146.07 1517.66 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
48. Rpl23 ENSMUSG00000071415 145.12 1507.79 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
49. Banf1 ENSMUSG00000024844 143.23 1488.15 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
50. Fkbp1a ENSMUSG00000032966 143.23 1488.15 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
51. Atp5g3 ENSMUSG00000018770 142.76 1483.26 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
52. Hsp90aa1 ENSMUSG00000021270 135.20 1404.72 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
53. Peg3 ENSMUSG00000002265 130.94 1360.46 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
54. Rpl37 ENSMUSG00000041841 129.05 1340.82 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
55. Gm5805 ENSMUSG00000061848 128.11 1331.05 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
56. Rpl32 ENSMUSG00000057841 126.69 1316.30 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
57. Eef1b2 ENSMUSG00000025967 122.43 1272.04 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
58. Rps4x ENSMUSG00000031320 120.54 1252.40 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
59. Myl6 ENSMUSG00000090841 119.60 1242.63 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
60. Paics ENSMUSG00000029247 116.76 1213.13 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
61. Trim28 ENSMUSG00000005566 116.76 1213.13 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
62. Rps5 ENSMUSG00000012848 113.92 1183.62 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
63. Son ENSMUSG00000022961 112.03 1163.98 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
64. U2af2 ENSMUSG00000030435 110.62 1149.33 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
65. Ybx1 ENSMUSG00000028639 110.62 1149.33 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
66. Ago2 ENSMUSG00000036698 109.67 1139.46 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
67. Gm14303 ENSMUSG00000081344 108.25 1124.71 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
68. Tecr ENSMUSG00000031708 107.31 1114.94 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
69. Pabpc1 ENSMUSG00000022283 104.47 1085.43 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
70. Rps3a1 ENSMUSG00000028081 104.47 1085.43 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
71. Ndufa12 ENSMUSG00000020022 102.58 1065.80 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
72. Gm26917 ENSMUSG00000097971 101.63 1055.93 predicted gene, 26917 [Source:MGI Symbol;Acc:MGI:5504032]
73. Col3a1 ENSMUSG00000026043 98.80 1026.52 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
74. Hmgn1 ENSMUSG00000040681 97.38 1011.77 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
75. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 97.38 1011.77 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
76. Gm5963 ENSMUSG00000052192 96.91 1006.89 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
77. Ran ENSMUSG00000029430 96.43 1001.90 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
78. Lamp1 ENSMUSG00000031447 94.54 982.26 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
79. Serbp1 ENSMUSG00000036371 94.54 982.26 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
80. Cdk4 ENSMUSG00000006728 94.07 977.38 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
81. Cox8a ENSMUSG00000035885 94.07 977.38 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
82. Gm14586 ENSMUSG00000083621 94.07 977.38 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
83. Rpl26 ENSMUSG00000060938 93.12 967.51 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
84. Ccnd2 ENSMUSG00000000184 91.23 947.87 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
85. Hba-x ENSMUSG00000055609 90.76 942.99 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
86. Rpl8 ENSMUSG00000003970 89.82 933.22 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
87. 2810417H13Rik 89.34 928.24 RIKEN cDNA 2810417H13 gene
88. Eef2 ENSMUSG00000034994 88.40 918.47 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
89. Gpc3 ENSMUSG00000055653 86.98 903.72 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
90. Wbp5 86.98 903.72 WW domain binding protein 5
91. Sub1 ENSMUSG00000022205 86.03 893.84 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
92. Hnrnpa2b1 ENSMUSG00000004980 83.20 864.44 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
93. Pcbp1 ENSMUSG00000051695 81.31 844.80 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
94. Tpm4 ENSMUSG00000031799 81.31 844.80 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
95. Mapre1 ENSMUSG00000027479 80.83 839.82 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
96. Scd2 ENSMUSG00000025203 80.36 834.93 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
97. Gm9846 Gm9846 79.89 830.05
98. Rpl39-ps ENSMUSG00000036305 79.89 830.05 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
99. Rps8 ENSMUSG00000047675 79.42 825.17 ribosomal protein S8 [Source:MGI Symbol;Acc:MGI:98166]
100. Cd24a ENSMUSG00000047139 78.94 820.18 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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