Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_2, section s39.

Sample reads: 96,243. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3584.46 37243.84 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Co2 ENSMUSG00000064354 2807.52 29171.15 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
3. Ptma ENSMUSG00000026238 2754.87 28624.10 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
4. mt-Atp6 ENSMUSG00000064357 2645.30 27485.63 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Nd4 ENSMUSG00000064363 2056.19 21364.56 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Nd1 ENSMUSG00000064341 2030.58 21098.47 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. H19 ENSMUSG00000000031 1256.48 13055.28 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
8. Actb ENSMUSG00000029580 1129.84 11739.45 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
9. mt-Co1 ENSMUSG00000064351 1081.46 11236.76 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd2 ENSMUSG00000064345 1054.42 10955.81 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
11. mt-Nd3 ENSMUSG00000064360 907.86 9433.00 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. Igf2 ENSMUSG00000048583 737.10 7658.74 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
13. Mdk ENSMUSG00000027239 668.80 6949.08 midkine [Source:MGI Symbol;Acc:MGI:96949]
14. mt-Rnr2 ENSMUSG00000064339 643.18 6682.87 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
15. Eef1a1 ENSMUSG00000037742 584.84 6076.70 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. mt-Nd5 ENSMUSG00000064367 526.50 5470.53 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
17. mt-Co3 ENSMUSG00000064358 469.58 4879.11 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. Hmga2 ENSMUSG00000056758 408.39 4243.32 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
19. Rpsa ENSMUSG00000032518 360.01 3740.63 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
20. Gm10800 ENSMUSG00000075014 358.59 3725.88 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
21. Gm13340 ENSMUSG00000083563 357.17 3711.13 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
22. Tuba1b ENSMUSG00000023004 321.59 3341.44 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
23. Pkm ENSMUSG00000032294 317.32 3297.07 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
24. Cfl1 ENSMUSG00000056201 298.82 3104.85 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
25. Tubb5 ENSMUSG00000001525 283.17 2942.24 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
26. Npm1 ENSMUSG00000057113 273.21 2838.75 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
27. Rps20 ENSMUSG00000028234 267.52 2779.63 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
28. Rps26 ENSMUSG00000025362 264.67 2750.02 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
29. Gm15459 ENSMUSG00000100801 260.40 2705.65 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
30. Rpl18a ENSMUSG00000045128 244.75 2543.04 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
31. Rpl4 ENSMUSG00000032399 233.37 2424.80 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
32. Chchd2 ENSMUSG00000070493 203.48 2114.23 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
33. Eif5a ENSMUSG00000078812 194.95 2025.60 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
34. Hsp90ab1 ENSMUSG00000023944 190.68 1981.23 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
35. Ubb ENSMUSG00000019505 189.26 1966.48 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
36. Tpt1 ENSMUSG00000060126 186.41 1936.87 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
37. Nedd4 ENSMUSG00000032216 182.14 1892.50 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
38. Ywhab ENSMUSG00000018326 179.29 1862.89 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
39. Rpl23 ENSMUSG00000071415 172.18 1789.01 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
40. Eif4g2 ENSMUSG00000005610 169.33 1759.40 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
41. Rplp1 ENSMUSG00000007892 167.91 1744.65 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
42. Grb10 ENSMUSG00000020176 160.80 1670.77 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
43. Eef2 ENSMUSG00000034994 159.37 1655.91 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
44. Hnrnpc ENSMUSG00000060373 157.95 1641.16 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
45. Hbb-y ENSMUSG00000052187 156.53 1626.40 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
46. U2af2 ENSMUSG00000030435 149.41 1552.42 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
47. Ran ENSMUSG00000029430 147.99 1537.67 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
48. Trim28 ENSMUSG00000005566 143.72 1493.30 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
49. mt-Rnr1 ENSMUSG00000064337 142.30 1478.55 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
50. Eef1b2 ENSMUSG00000025967 140.87 1463.69 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
51. Rps5 ENSMUSG00000012848 140.87 1463.69 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
52. Atp5g3 ENSMUSG00000018770 138.03 1434.18 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
53. Rps4x ENSMUSG00000031320 138.03 1434.18 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
54. Cox8a ENSMUSG00000035885 135.18 1404.57 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
55. Gm14586 ENSMUSG00000083621 135.18 1404.57 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
56. Gm9844 ENSMUSG00000091955 133.76 1389.82 predicted pseudogene 9844 [Source:MGI Symbol;Acc:MGI:3704288]
57. Rpl37 ENSMUSG00000041841 130.91 1360.20 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
58. Hsp90aa1 ENSMUSG00000021270 129.49 1345.45 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
59. Ndufa12 ENSMUSG00000020022 128.07 1330.69 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
60. Pbx1 ENSMUSG00000052534 126.64 1315.84 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
61. Myl6 ENSMUSG00000090841 120.95 1256.71 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
62. Cdkn1c ENSMUSG00000037664 118.11 1227.21 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
63. Set ENSMUSG00000054766 118.11 1227.21 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
64. Ybx1 ENSMUSG00000028639 118.11 1227.21 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
65. Paics ENSMUSG00000029247 116.68 1212.35 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
66. Rpl32 ENSMUSG00000057841 116.68 1212.35 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
67. Rps3a1 ENSMUSG00000028081 116.68 1212.35 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
68. Banf1 ENSMUSG00000024844 113.84 1182.84 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
69. Gm14303 ENSMUSG00000081344 112.41 1167.98 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
70. Rpl39-ps ENSMUSG00000036305 112.41 1167.98 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
71. Ddx39b ENSMUSG00000019432 110.99 1153.23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
72. Ldha ENSMUSG00000063229 110.99 1153.23 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
73. Fscn1 ENSMUSG00000029581 108.15 1123.72 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
74. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 108.15 1123.72 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
75. Hba-a1 ENSMUSG00000069919 106.72 1108.86 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
76. Ngfrap1 106.72 1108.86 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
77. Tpm4 ENSMUSG00000031799 103.88 1079.35 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
78. Fkbp1a ENSMUSG00000032966 102.45 1064.49 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
79. Hba-x ENSMUSG00000055609 102.45 1064.49 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
80. Gm17132 ENSMUSG00000061331 101.03 1049.74 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
81. Gm5805 ENSMUSG00000061848 101.03 1049.74 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
82. Hmgn1 ENSMUSG00000040681 101.03 1049.74 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
83. Ywhaz ENSMUSG00000022285 101.03 1049.74 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
84. Lamp1 ENSMUSG00000031447 99.61 1034.98 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
85. Meg3 ENSMUSG00000021268 96.76 1005.37 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
86. Cdk4 ENSMUSG00000006728 95.34 990.62 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
87. Tecr ENSMUSG00000031708 93.92 975.86 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
88. Anp32b ENSMUSG00000028333 92.49 961.00 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
89. Jund ENSMUSG00000071076, ENSMUSG00000110974 91.07 946.25 jun D proto-oncogene [Source:MGI Symbol;Acc:MGI:96648]
90. Pabpc1 ENSMUSG00000022283 91.07 946.25 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
91. Rrm2 ENSMUSG00000020649 91.07 946.25 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
92. Ago2 ENSMUSG00000036698 89.65 931.50 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
93. Tmsb4x ENSMUSG00000049775 89.65 931.50 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
94. Rpl8 ENSMUSG00000003970 88.22 916.64 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
95. Rps8 ENSMUSG00000047675 88.22 916.64 ribosomal protein S8 [Source:MGI Symbol;Acc:MGI:98166]
96. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 86.80 901.88 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
97. Rps15 ENSMUSG00000063457 86.80 901.88 ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:98117]
98. Rpl13a ENSMUSG00000074129 85.38 887.13 ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
99. Rps9 ENSMUSG00000006333 85.38 887.13 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
100. Crabp1 ENSMUSG00000032291 83.96 872.37 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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