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Experiment Mouse_E10_5_slice_2, section s33.

Sample reads: 96,231. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 4623.02 48040.76 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 3387.81 35204.90 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Nd1 ENSMUSG00000064341 2709.78 28159.06 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. Ptma ENSMUSG00000026238 2475.92 25728.87 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
5. mt-Co2 ENSMUSG00000064354 2443.74 25394.46 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd4 ENSMUSG00000064363 2117.28 22002.01 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1315.26 13667.71 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. H19 ENSMUSG00000000031 1234.43 12827.75 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
9. Actb ENSMUSG00000029580 999.78 10389.35 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
10. mt-Nd3 ENSMUSG00000064360 948.78 9859.38 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. mt-Nd2 ENSMUSG00000064345 919.74 9557.61 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. mt-Rnr2 ENSMUSG00000064339 825.57 8579.03 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
13. Eef1a1 ENSMUSG00000037742 668.62 6948.06 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
14. Igf2 ENSMUSG00000048583 608.97 6328.20 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
15. Mdk ENSMUSG00000027239 586.22 6091.79 midkine [Source:MGI Symbol;Acc:MGI:96949]
16. mt-Co3 ENSMUSG00000064358 541.48 5626.86 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
17. Hmga2 ENSMUSG00000056758 430.05 4468.92 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
18. Rpsa ENSMUSG00000032518 416.71 4330.30 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
19. Gm13340 ENSMUSG00000083563 375.90 3906.22 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. mt-Nd5 ENSMUSG00000064367 347.65 3612.65 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
21. Pkm ENSMUSG00000032294 342.94 3563.71 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
22. Tuba1b ENSMUSG00000023004 298.99 3107.00 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
23. Tubb5 ENSMUSG00000001525 296.64 3082.58 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
24. Cfl1 ENSMUSG00000056201 261.33 2715.65 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
25. Hbb-y ENSMUSG00000052187 256.62 2666.70 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
26. Rpl4 ENSMUSG00000032399 248.77 2585.13 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
27. Npm1 ENSMUSG00000057113 245.63 2552.50 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
28. Rpl18a ENSMUSG00000045128 213.45 2218.10 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
29. Rpl23 ENSMUSG00000071415 200.90 2087.68 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
30. Rps26 ENSMUSG00000025362 200.90 2087.68 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
31. Tpt1 ENSMUSG00000060126 196.97 2046.84 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
32. Pbx1 ENSMUSG00000052534 189.13 1965.37 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
33. Ubb ENSMUSG00000019505 183.63 1908.22 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
34. Hsp90ab1 ENSMUSG00000023944 182.85 1900.11 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
35. Hnrnpc ENSMUSG00000060373 179.71 1867.48 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
36. Rps20 ENSMUSG00000028234 175.79 1826.75 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
37. Nedd4 ENSMUSG00000032216 175.00 1818.54 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
38. Eif5a ENSMUSG00000078812 168.72 1753.28 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
39. U2af2 ENSMUSG00000030435 166.37 1728.86 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
40. Ywhab ENSMUSG00000018326 166.37 1728.86 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
41. Grb10 ENSMUSG00000020176 164.80 1712.54 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
42. Chchd2 ENSMUSG00000070493 164.01 1704.33 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
43. Eif4g2 ENSMUSG00000005610 162.45 1688.12 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
44. mt-Rnr1 ENSMUSG00000064337 161.66 1679.91 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
45. Set ENSMUSG00000054766 157.74 1639.18 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
46. Rpl37 ENSMUSG00000041841 156.95 1630.97 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
47. Rpl41 ENSMUSG00000093674 149.89 1557.60 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
48. Ran ENSMUSG00000029430 146.75 1524.97 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
49. Ndufa12 ENSMUSG00000020022 145.18 1508.66 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
50. Hsp90aa1 ENSMUSG00000021270 143.61 1492.34 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
51. Banf1 ENSMUSG00000024844 142.83 1484.24 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
52. Rplp1 ENSMUSG00000007892 137.33 1427.08 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
53. Rps4x ENSMUSG00000031320 137.33 1427.08 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
54. Cox8a ENSMUSG00000035885 135.76 1410.77 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
55. Eef1b2 ENSMUSG00000025967 134.19 1394.45 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
56. Cdkn1c ENSMUSG00000037664 128.70 1337.40 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
57. Pabpc1 ENSMUSG00000022283 128.70 1337.40 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
58. Ybx1 ENSMUSG00000028639 128.70 1337.40 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
59. Atp5g3 ENSMUSG00000018770 127.92 1329.30 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
60. Ago2 ENSMUSG00000036698 126.35 1312.98 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
61. Rps5 ENSMUSG00000012848 123.21 1280.35 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
62. Peg3 ENSMUSG00000002265 122.42 1272.14 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
63. 2810417H13Rik 120.85 1255.83 RIKEN cDNA 2810417H13 gene
64. Rpl32 ENSMUSG00000057841 120.07 1247.72 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
65. Fkbp1a ENSMUSG00000032966 119.28 1239.51 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
66. Paics ENSMUSG00000029247 117.71 1223.20 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
67. Rrm2 ENSMUSG00000020649 115.36 1198.78 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
68. Ldha ENSMUSG00000063229 114.58 1190.67 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
69. Myl6 ENSMUSG00000090841 109.87 1141.73 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
70. Trim28 ENSMUSG00000005566 109.08 1133.52 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
71. Rpl26 ENSMUSG00000060938 108.30 1125.41 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
72. Tecr ENSMUSG00000031708 107.51 1117.21 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
73. Gm14586 ENSMUSG00000083621 106.73 1109.10 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
74. Tmsb4x ENSMUSG00000049775 102.02 1060.16 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
75. Hmgn1 ENSMUSG00000040681 101.23 1051.95 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
76. Cdk4 ENSMUSG00000006728 99.66 1035.63 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
77. Pcbp1 ENSMUSG00000051695 99.66 1035.63 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
78. Gm14303 ENSMUSG00000081344 96.53 1003.10 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
79. Rps3a1 ENSMUSG00000028081 96.53 1003.10 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
80. Ngfrap1 95.74 994.90 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
81. Rpl39-ps ENSMUSG00000036305 94.17 978.58 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
82. Eef2 ENSMUSG00000034994 93.39 970.48 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
83. Meg3 ENSMUSG00000021268 92.60 962.27 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
84. Ywhaz ENSMUSG00000022285 89.46 929.64 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
85. Lamp1 ENSMUSG00000031447 88.68 921.53 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
86. Gm10800 ENSMUSG00000075014 87.11 905.22 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
87. Fkbp4 ENSMUSG00000030357 86.32 897.01 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
88. Gm15459 ENSMUSG00000100801 86.32 897.01 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
89. Hba-a1 ENSMUSG00000069919 86.32 897.01 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
90. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 86.32 897.01 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
91. Gm5805 ENSMUSG00000061848 85.54 888.90 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
92. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 85.54 888.90 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
93. Rpl8 ENSMUSG00000003970 85.54 888.90 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
94. Rps15 ENSMUSG00000063457 85.54 888.90 ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:98117]
95. Scd2 ENSMUSG00000025203 85.54 888.90 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
96. Acta2 ENSMUSG00000035783 84.75 880.69 actin, alpha 2, smooth muscle, aorta [Source:MGI Symbol;Acc:MGI:87909]
97. Sub1 ENSMUSG00000022205 84.75 880.69 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
98. Gpc3 ENSMUSG00000055653 83.18 864.38 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
99. Ddx39b ENSMUSG00000019432 82.40 856.27 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
100. Hnrnpa2b1 ENSMUSG00000004980 82.40 856.27 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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