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Experiment Mouse_E10_5_slice_2, section s26.

Sample reads: 96,241. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3314.83 34443.10 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 3165.05 32886.80 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 2623.95 27264.44 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Co2 ENSMUSG00000064354 2177.73 22627.94 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd1 ENSMUSG00000064341 2042.07 21218.35 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Nd4 ENSMUSG00000064363 1447.64 15041.86 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co1 ENSMUSG00000064351 1093.96 11366.91 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. H19 ENSMUSG00000000031 1079.85 11220.30 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
9. mt-Rnr2 ENSMUSG00000064339 1039.85 10804.67 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
10. Actb ENSMUSG00000029580 966.92 10046.89 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Nd2 ENSMUSG00000064345 953.59 9908.38 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. Igf2 ENSMUSG00000048583 729.31 7577.98 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
13. mt-Nd3 ENSMUSG00000064360 642.26 6673.47 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
14. Mdk ENSMUSG00000027239 634.42 6592.01 midkine [Source:MGI Symbol;Acc:MGI:96949]
15. Eef1a1 ENSMUSG00000037742 478.36 4970.45 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. mt-Co3 ENSMUSG00000064358 443.08 4603.87 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
17. mt-Nd5 ENSMUSG00000064367 436.02 4530.51 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
18. Hmga2 ENSMUSG00000056758 397.59 4131.20 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
19. Gm13340 ENSMUSG00000083563 385.83 4009.01 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. Pkm ENSMUSG00000032294 351.32 3650.43 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
21. Rpsa ENSMUSG00000032518 337.99 3511.92 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
22. Tuba1b ENSMUSG00000023004 334.07 3471.19 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
23. Cfl1 ENSMUSG00000056201 304.27 3161.55 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
24. Npm1 ENSMUSG00000057113 301.92 3137.13 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
25. Tubb5 ENSMUSG00000001525 278.39 2892.64 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
26. Set ENSMUSG00000054766 257.22 2672.67 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
27. Hsp90ab1 ENSMUSG00000023944 254.87 2648.25 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
28. Ybx1 ENSMUSG00000028639 228.99 2379.35 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
29. Nedd4 ENSMUSG00000032216 227.42 2363.03 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
30. Eif5a ENSMUSG00000078812 196.84 2045.29 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
31. Hnrnpc ENSMUSG00000060373 189.78 1971.93 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
32. Rps20 ENSMUSG00000028234 188.21 1955.62 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
33. U2af2 ENSMUSG00000030435 188.21 1955.62 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
34. Chchd2 ENSMUSG00000070493 187.42 1947.41 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
35. Rpl4 ENSMUSG00000032399 178.01 1849.63 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
36. Rpl18a ENSMUSG00000045128 177.23 1841.53 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
37. Rps26 ENSMUSG00000025362 175.66 1825.21 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
38. Tpt1 ENSMUSG00000060126 174.88 1817.11 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
39. Atp5g3 ENSMUSG00000018770 171.74 1784.48 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
40. Ubb ENSMUSG00000019505 168.60 1751.86 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
41. Fkbp1a ENSMUSG00000032966 167.04 1735.65 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
42. mt-Rnr1 ENSMUSG00000064337 157.63 1637.87 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
43. Rpl23 ENSMUSG00000071415 156.06 1621.56 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
44. Ywhab ENSMUSG00000018326 152.14 1580.83 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
45. Peg3 ENSMUSG00000002265 151.35 1572.62 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
46. Banf1 ENSMUSG00000024844 150.57 1564.51 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
47. Eef1b2 ENSMUSG00000025967 150.57 1564.51 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
48. Pabpc1 ENSMUSG00000022283 149.00 1548.20 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
49. Ago2 ENSMUSG00000036698 148.21 1539.99 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
50. Ccnd2 ENSMUSG00000000184 146.65 1523.78 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
51. Anp32b ENSMUSG00000028333 135.67 1409.69 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
52. Pcbp1 ENSMUSG00000051695 132.53 1377.07 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
53. Eif4g2 ENSMUSG00000005610 130.18 1352.65 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
54. Pbx1 ENSMUSG00000052534 129.39 1344.44 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
55. Trim28 ENSMUSG00000005566 129.39 1344.44 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
56. Fscn1 ENSMUSG00000029581 127.83 1328.23 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
57. Ran ENSMUSG00000029430 127.83 1328.23 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
58. Ddx39b ENSMUSG00000019432 123.12 1279.29 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
59. 2810417H13Rik 122.34 1271.19 RIKEN cDNA 2810417H13 gene
60. Hsp90aa1 ENSMUSG00000021270 119.98 1246.67 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
61. Meg3 ENSMUSG00000021268 119.98 1246.67 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
62. Rplp1 ENSMUSG00000007892 119.98 1246.67 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
63. Ndufa12 ENSMUSG00000020022 117.63 1222.25 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
64. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 117.63 1222.25 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
65. Rpl41 ENSMUSG00000093674 115.28 1197.83 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
66. Rps4x ENSMUSG00000031320 115.28 1197.83 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
67. Myl6 ENSMUSG00000090841 113.71 1181.52 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
68. Rps3a1 ENSMUSG00000028081 112.93 1173.41 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
69. Malat1 ENSMUSG00000092341 110.57 1148.89 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
70. Tecr ENSMUSG00000031708 110.57 1148.89 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
71. Cox8a ENSMUSG00000035885 109.79 1140.78 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
72. Grb10 ENSMUSG00000020176 109.79 1140.78 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
73. Hmgn1 ENSMUSG00000040681 109.79 1140.78 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
74. Rps9 ENSMUSG00000006333 109.00 1132.58 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
75. Ywhae ENSMUSG00000020849 109.00 1132.58 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
76. Son ENSMUSG00000022961 108.22 1124.47 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
77. Gm5805 ENSMUSG00000061848 106.65 1108.16 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
78. Ldha ENSMUSG00000063229 104.30 1083.74 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
79. Rrm2 ENSMUSG00000020649 104.30 1083.74 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
80. Rpl37 ENSMUSG00000041841 103.51 1075.53 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
81. Rpl8 ENSMUSG00000003970 103.51 1075.53 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
82. Gm14303 ENSMUSG00000081344 98.81 1026.70 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
83. Cdkn1c ENSMUSG00000037664 96.46 1002.28 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
84. Rps5 ENSMUSG00000012848 95.67 994.07 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
85. Serbp1 ENSMUSG00000036371 95.67 994.07 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
86. Rpl26 ENSMUSG00000060938 94.89 985.96 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
87. Sf3b4 ENSMUSG00000068856 94.89 985.96 splicing factor 3b, subunit 4 [Source:MGI Symbol;Acc:MGI:109580]
88. Rps15 ENSMUSG00000063457 90.97 945.23 ribosomal protein S15 [Source:MGI Symbol;Acc:MGI:98117]
89. Cdk4 ENSMUSG00000006728 89.40 928.92 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
90. Col3a1 ENSMUSG00000026043 89.40 928.92 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
91. Gm14586 ENSMUSG00000083621 89.40 928.92 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
92. Lamp1 ENSMUSG00000031447 88.62 920.82 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
93. Paics ENSMUSG00000029247 87.83 912.61 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
94. Rpl32 ENSMUSG00000057841 87.05 904.50 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
95. Ngfrap1 86.26 896.29 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
96. Tmsb10 ENSMUSG00000079523 86.26 896.29 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
97. Tcf7l1 ENSMUSG00000055799 83.13 863.77 transcription factor 7 like 1 (T cell specific, HMG box) [Source:MGI Symbol;Acc:MGI:1202876]
98. Top1 ENSMUSG00000070544 82.34 855.56 topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
99. Marcks ENSMUSG00000069662 81.56 847.46 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
100. Dlk1 ENSMUSG00000040856, ENSMUSG00000098411 80.77 839.25 delta like non-canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:94900]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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