Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_2, section s19.

Sample reads: 96,257. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3897.80 40493.49 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Atp6 ENSMUSG00000064357 2871.63 29832.81 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. Ptma ENSMUSG00000026238 2501.99 25992.69 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
4. mt-Nd1 ENSMUSG00000064341 2306.13 23957.94 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Co2 ENSMUSG00000064354 2151.65 22353.08 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd4 ENSMUSG00000064363 2093.72 21751.25 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Rnr2 ENSMUSG00000064339 1507.08 15656.76 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
8. mt-Co1 ENSMUSG00000064351 1199.96 12466.15 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Nd2 ENSMUSG00000064345 1129.16 11730.63 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. Actb ENSMUSG00000029580 909.40 9447.58 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Nd3 ENSMUSG00000064360 658.37 6839.68 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
12. Eef1a1 ENSMUSG00000037742 589.41 6123.27 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
13. mt-Co3 ENSMUSG00000064358 570.10 5922.66 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
14. H19 ENSMUSG00000000031 536.99 5578.69 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
15. mt-Nd5 ENSMUSG00000064367 523.20 5435.42 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
16. Hbb-y ENSMUSG00000052187 450.56 4680.78 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
17. Gm13340 ENSMUSG00000083563 448.72 4661.67 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
18. Rpsa ENSMUSG00000032518 420.22 4365.58 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
19. Cfl1 ENSMUSG00000056201 373.32 3878.35 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
20. Mdk ENSMUSG00000027239 327.35 3400.78 midkine [Source:MGI Symbol;Acc:MGI:96949]
21. Igf2 ENSMUSG00000048583 323.67 3362.55 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
22. Gm10800 ENSMUSG00000075014 313.55 3257.41 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
23. Pkm ENSMUSG00000032294 296.08 3075.92 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
24. Tubb5 ENSMUSG00000001525 267.58 2779.84 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
25. Rps26 ENSMUSG00000025362 256.54 2665.14 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
26. Chchd2 ENSMUSG00000070493 248.27 2579.23 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
27. Npm1 ENSMUSG00000057113 245.51 2550.56 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
28. Tubb2b ENSMUSG00000045136 243.67 2531.44 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
29. Tpt1 ENSMUSG00000060126 240.91 2502.77 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
30. Tmsb4x ENSMUSG00000049775 233.56 2426.41 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
31. Tuba1b ENSMUSG00000023004 217.92 2263.93 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
32. Rpl4 ENSMUSG00000032399 215.17 2235.36 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
33. Eif4g2 ENSMUSG00000005610 210.57 2187.57 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
34. Hnrnpc ENSMUSG00000060373 205.05 2130.22 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
35. Hmga2 ENSMUSG00000056758 187.58 1948.73 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
36. Ubb ENSMUSG00000019505 187.58 1948.73 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
37. Hsp90ab1 ENSMUSG00000023944 183.90 1910.50 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
38. Nedd4 ENSMUSG00000032216 180.22 1872.27 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
39. Rpl23 ENSMUSG00000071415 178.38 1853.16 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
40. Tuba1a ENSMUSG00000072235 175.63 1824.59 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
41. mt-Rnr1 ENSMUSG00000064337 175.63 1824.59 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
42. Rps20 ENSMUSG00000028234 170.11 1767.24 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
43. Myl6 ENSMUSG00000090841 166.43 1729.01 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
44. Rpl18a ENSMUSG00000045128 165.51 1719.45 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
45. Rpl32 ENSMUSG00000057841 164.59 1709.89 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
46. Atp5g3 ENSMUSG00000018770 156.32 1623.98 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
47. Ybx1 ENSMUSG00000028639 154.48 1604.86 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
48. Hsp90aa1 ENSMUSG00000021270 152.64 1585.75 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
49. Eef1b2 ENSMUSG00000025967 150.80 1566.63 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
50. Rps4x ENSMUSG00000031320 149.88 1557.07 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
51. Grb10 ENSMUSG00000020176 148.96 1547.52 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
52. Rplp1 ENSMUSG00000007892 148.96 1547.52 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
53. Cox8a ENSMUSG00000035885 148.04 1537.96 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
54. Map1b ENSMUSG00000052727 148.04 1537.96 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
55. Rps3a1 ENSMUSG00000028081 143.44 1490.17 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
56. Gm14303 ENSMUSG00000081344 142.52 1480.61 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
57. Set ENSMUSG00000054766 142.52 1480.61 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
58. Hba-a1 ENSMUSG00000069919 139.77 1452.04 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
59. U2af2 ENSMUSG00000030435 137.93 1432.93 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
60. Banf1 ENSMUSG00000024844 134.25 1394.70 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
61. Malat1 ENSMUSG00000092341 133.33 1385.14 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
62. Ndufa12 ENSMUSG00000020022 132.41 1375.58 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
63. Rpl37 ENSMUSG00000041841 132.41 1375.58 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
64. Gm17132 ENSMUSG00000061331 129.65 1346.91 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
65. Ywhab ENSMUSG00000018326 128.73 1337.35 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
66. Pabpc1 ENSMUSG00000022283 122.29 1270.45 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
67. Rps5 ENSMUSG00000012848 122.29 1270.45 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
68. Fkbp1a ENSMUSG00000032966 120.46 1251.44 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
69. Cd24a ENSMUSG00000047139 119.54 1241.88 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
70. Tecr ENSMUSG00000031708 118.62 1232.32 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
71. Ldha ENSMUSG00000063229 117.70 1222.76 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
72. Eif5a ENSMUSG00000078812 115.86 1203.65 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
73. Hbb-bh1 ENSMUSG00000052217 114.02 1184.53 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
74. Son ENSMUSG00000022961 111.26 1155.86 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
75. Pbx1 ENSMUSG00000052534 107.58 1117.63 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
76. Fscn1 ENSMUSG00000029581 106.66 1108.07 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
77. Hba-x ENSMUSG00000055609 105.74 1098.51 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
78. Sub1 ENSMUSG00000022205 105.74 1098.51 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
79. Stmn2 ENSMUSG00000027500 103.90 1079.40 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
80. Gm14586 ENSMUSG00000083621 102.99 1069.94 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
81. Gm5805 ENSMUSG00000061848 102.07 1060.39 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
82. Ran ENSMUSG00000029430 100.23 1041.27 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
83. Rpl26 ENSMUSG00000060938 100.23 1041.27 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
84. Rrm2 ENSMUSG00000020649 100.23 1041.27 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
85. Paics ENSMUSG00000029247 97.47 1012.60 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
86. Tubb3 ENSMUSG00000062380 97.47 1012.60 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
87. Trp53i11 ENSMUSG00000068735 96.55 1003.04 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
88. Ywhae ENSMUSG00000020849 96.55 1003.04 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
89. Basp1 ENSMUSG00000045763 93.79 974.37 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
90. Trim28 ENSMUSG00000005566 91.95 955.25 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
91. Gm2000 ENSMUSG00000078193 91.03 945.69 predicted gene 2000 [Source:MGI Symbol;Acc:MGI:3780170]
92. Pcbp1 ENSMUSG00000051695 91.03 945.69 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
93. Gm26917 ENSMUSG00000097971 89.19 926.58 predicted gene, 26917 [Source:MGI Symbol;Acc:MGI:5504032]
94. Lamp1 ENSMUSG00000031447 89.19 926.58 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
95. Eef2 ENSMUSG00000034994 87.35 907.46 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
96. Hba-a2 ENSMUSG00000069917 87.35 907.46 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
97. Scd2 ENSMUSG00000025203 87.35 907.46 stearoyl-Coenzyme A desaturase 2 [Source:MGI Symbol;Acc:MGI:98240]
98. Srsf3 ENSMUSG00000071172 87.35 907.46 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
99. Adprh ENSMUSG00000002844 82.76 859.78 ADP-ribosylarginine hydrolase [Source:MGI Symbol;Acc:MGI:1098234]
100. Cdk4 ENSMUSG00000006728 82.76 859.78 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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