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Experiment Mouse_E10_5_slice_2, section s17.

Sample reads: 96,237. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3415.95 35495.22 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 3166.81 32906.40 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Atp6 ENSMUSG00000064357 2510.93 26091.13 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Nd1 ENSMUSG00000064341 2041.16 21209.74 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Nd4 ENSMUSG00000064363 1779.27 18488.44 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
6. mt-Co2 ENSMUSG00000064354 1641.94 17061.44 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Rnr2 ENSMUSG00000064339 1241.21 12897.44 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
8. mt-Co1 ENSMUSG00000064351 989.81 10285.14 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. Actb ENSMUSG00000029580 848.73 8819.17 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
10. mt-Nd2 ENSMUSG00000064345 839.73 8725.65 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
11. Eef1a1 ENSMUSG00000037742 556.82 5785.93 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
12. mt-Nd3 ENSMUSG00000064360 544.81 5661.13 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
13. H19 ENSMUSG00000000031 512.54 5325.82 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
14. Hbb-y ENSMUSG00000052187 482.53 5013.98 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
15. Cfl1 ENSMUSG00000056201 420.99 4374.52 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
16. Pkm ENSMUSG00000032294 411.99 4281.00 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
17. Rpsa ENSMUSG00000032518 394.73 4101.65 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
18. Mdk ENSMUSG00000027239 384.97 4000.23 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. mt-Co3 ENSMUSG00000064358 353.45 3672.71 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
20. mt-Nd5 ENSMUSG00000064367 338.44 3516.74 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
21. Gm13340 ENSMUSG00000083563 328.69 3415.43 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
22. Igf2 ENSMUSG00000048583 300.17 3119.07 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
23. Hba-x ENSMUSG00000055609 285.91 2970.90 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
24. Tubb5 ENSMUSG00000001525 271.66 2822.83 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
25. Tmsb4x ENSMUSG00000049775 258.90 2690.24 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
26. Tubb2b ENSMUSG00000045136 258.90 2690.24 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
27. Npm1 ENSMUSG00000057113 234.13 2432.85 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
28. Hnrnpc ENSMUSG00000060373 232.63 2417.26 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
29. Chchd2 ENSMUSG00000070493 225.88 2347.12 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
30. Set ENSMUSG00000054766 219.13 2276.98 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
31. Eif4g2 ENSMUSG00000005610 216.87 2253.50 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
32. Rps26 ENSMUSG00000025362 216.12 2245.71 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
33. Malat1 ENSMUSG00000092341 213.12 2214.53 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
34. Gm15459 ENSMUSG00000100801 212.37 2206.74 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
35. Trp53i11 ENSMUSG00000068735 209.37 2175.57 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
36. Atp5g3 ENSMUSG00000018770 207.87 2159.98 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
37. Ubb ENSMUSG00000019505 207.12 2152.19 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
38. Ybx1 ENSMUSG00000028639 206.37 2144.40 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
39. Nedd4 ENSMUSG00000032216 204.87 2128.81 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
40. Tpt1 ENSMUSG00000060126 204.12 2121.02 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
41. Hmga2 ENSMUSG00000056758 188.36 1957.25 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
42. Tuba1a ENSMUSG00000072235 185.36 1926.08 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
43. Tuba1b ENSMUSG00000023004 183.10 1902.60 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
44. Rpl4 ENSMUSG00000032399 180.85 1879.22 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
45. U2af2 ENSMUSG00000030435 171.10 1777.90 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
46. Cox8a ENSMUSG00000035885 166.60 1731.14 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
47. Rps20 ENSMUSG00000028234 165.84 1723.25 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
48. Hsp90ab1 ENSMUSG00000023944 163.59 1699.87 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
49. Eef1b2 ENSMUSG00000025967 162.84 1692.07 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
50. Hsp90aa1 ENSMUSG00000021270 162.84 1692.07 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
51. Fkbp1a ENSMUSG00000032966 161.34 1676.49 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
52. Rpl18a ENSMUSG00000045128 157.59 1637.52 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
53. Eif5a ENSMUSG00000078812 156.84 1629.73 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
54. Map1b ENSMUSG00000052727 154.59 1606.35 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
55. Myl6 ENSMUSG00000090841 153.84 1598.56 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
56. Hba-a1 ENSMUSG00000069919 151.59 1575.18 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
57. Rpl23 ENSMUSG00000071415 150.84 1567.38 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
58. Rpl37 ENSMUSG00000041841 146.33 1520.52 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
59. Pcbp1 ENSMUSG00000051695 143.33 1489.35 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
60. Grb10 ENSMUSG00000020176 141.83 1473.76 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
61. Hbb-bh1 ENSMUSG00000052217 139.58 1450.38 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
62. Rps3a1 ENSMUSG00000028081 139.58 1450.38 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
63. Rplp1 ENSMUSG00000007892 138.08 1434.79 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
64. Banf1 ENSMUSG00000024844 136.58 1419.21 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
65. Gm14303 ENSMUSG00000081344 135.83 1411.41 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
66. mt-Rnr1 ENSMUSG00000064337 133.58 1388.03 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
67. Ldha ENSMUSG00000063229 132.83 1380.24 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
68. Tecr ENSMUSG00000031708 131.32 1364.55 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
69. Rps4x ENSMUSG00000031320 123.82 1286.62 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
70. Rrm2 ENSMUSG00000020649 123.07 1278.82 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
71. Ran ENSMUSG00000029430 121.57 1263.24 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
72. Rps5 ENSMUSG00000012848 121.57 1263.24 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
73. Basp1 ENSMUSG00000045763 115.57 1200.89 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
74. Ndufa12 ENSMUSG00000020022 114.82 1193.10 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
75. Pabpc1 ENSMUSG00000022283 113.31 1177.41 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
76. Gm10800 ENSMUSG00000075014 110.31 1146.23 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
77. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 108.81 1130.65 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
78. Fscn1 ENSMUSG00000029581 107.31 1115.06 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
79. Gm5805 ENSMUSG00000061848 107.31 1115.06 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
80. Ywhab ENSMUSG00000018326 107.31 1115.06 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
81. Pbx1 ENSMUSG00000052534 104.31 1083.89 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
82. Lamp1 ENSMUSG00000031447 103.56 1076.09 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
83. Rpl32 ENSMUSG00000057841 103.56 1076.09 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
84. Ywhae ENSMUSG00000020849 103.56 1076.09 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
85. Sub1 ENSMUSG00000022205 98.31 1021.54 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
86. Tubb3 ENSMUSG00000062380 98.31 1021.54 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
87. Hnrnpa2b1 ENSMUSG00000004980 93.80 974.68 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
88. Nnat ENSMUSG00000067786 93.80 974.68 neuronatin [Source:MGI Symbol;Acc:MGI:104716]
89. Rps9 ENSMUSG00000006333 90.80 943.50 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
90. Cd24a ENSMUSG00000047139 90.05 935.71 CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
91. Cdkn1c ENSMUSG00000037664 90.05 935.71 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
92. Rpl41 ENSMUSG00000093674 90.05 935.71 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
93. Ina ENSMUSG00000034336 88.55 920.13 internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
94. Marcks ENSMUSG00000069662 88.55 920.13 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
95. Stmn1 ENSMUSG00000028832 88.55 920.13 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
96. Ccnd2 ENSMUSG00000000184 87.80 912.33 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
97. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 87.05 904.54 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
98. Hnrnpa0 ENSMUSG00000007836 87.05 904.54 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
99. Son ENSMUSG00000022961 87.05 904.54 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
100. Marcksl1 ENSMUSG00000047945 86.30 896.75 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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