Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E10_5_slice_2, section s14.

Sample reads: 96,265. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3068.93 31880.14 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Atp6 ENSMUSG00000064357 2544.99 26437.44 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Cytb ENSMUSG00000064370 2540.05 26386.12 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Nd1 ENSMUSG00000064341 2076.75 21573.35 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
5. mt-Co2 ENSMUSG00000064354 1913.85 19881.14 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd4 ENSMUSG00000064363 1545.75 16057.30 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. Hbb-y ENSMUSG00000052187 1043.66 10841.57 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
8. mt-Rnr2 ENSMUSG00000064339 1027.44 10673.08 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
9. mt-Co1 ENSMUSG00000064351 1012.64 10519.34 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
10. mt-Nd2 ENSMUSG00000064345 887.11 9215.33 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
11. Actb ENSMUSG00000029580 672.03 6981.07 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. Eef1a1 ENSMUSG00000037742 553.56 5750.40 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
13. Pkm ENSMUSG00000032294 531.70 5523.32 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
14. mt-Nd3 ENSMUSG00000064360 508.43 5281.59 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
15. Rpsa ENSMUSG00000032518 477.41 4959.35 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
16. H19 ENSMUSG00000000031 425.22 4417.20 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
17. Cfl1 ENSMUSG00000056201 390.67 4058.29 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
18. Mdk ENSMUSG00000027239 347.65 3611.40 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. mt-Co3 ENSMUSG00000064358 340.60 3538.16 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
20. Hba-a1 ENSMUSG00000069919 330.02 3428.26 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
21. Gm13340 ENSMUSG00000083563 326.50 3391.69 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
22. Hbb-bh1 ENSMUSG00000052217 322.97 3355.02 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
23. mt-Nd5 ENSMUSG00000064367 322.27 3347.75 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
24. Npm1 ENSMUSG00000057113 306.05 3179.26 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
25. Hba-x ENSMUSG00000055609 290.53 3018.04 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
26. Tuba1b ENSMUSG00000023004 279.25 2900.86 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
27. Hnrnpc ENSMUSG00000060373 265.85 2761.66 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
28. Nedd4 ENSMUSG00000032216 243.29 2527.30 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
29. Igf2 ENSMUSG00000048583 238.35 2475.99 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
30. Tpt1 ENSMUSG00000060126 232.00 2410.02 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
31. Tubb5 ENSMUSG00000001525 227.77 2366.08 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
32. Hmga2 ENSMUSG00000056758 227.07 2358.81 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
33. Rps26 ENSMUSG00000025362 226.36 2351.44 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
34. Tmsb4x ENSMUSG00000049775 226.36 2351.44 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
35. Rpl4 ENSMUSG00000032399 220.72 2292.85 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
36. Set ENSMUSG00000054766 218.61 2270.93 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
37. Ubb ENSMUSG00000019505 218.61 2270.93 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
38. Hsp90ab1 ENSMUSG00000023944 214.37 2226.88 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
39. Rpl18a ENSMUSG00000045128 210.85 2190.32 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
40. mt-Rnr1 ENSMUSG00000064337 207.32 2153.65 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
41. Crabp1 ENSMUSG00000032291 203.09 2109.71 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
42. Ybx1 ENSMUSG00000028639 203.09 2109.71 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
43. Chchd2 ENSMUSG00000070493 200.98 2087.79 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
44. Atp5g3 ENSMUSG00000018770 198.16 2058.49 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
45. Hba-a2 ENSMUSG00000069917 186.17 1933.94 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
46. Eif4g2 ENSMUSG00000005610 179.12 1860.70 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
47. Rps20 ENSMUSG00000028234 177.70 1845.95 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
48. Rplp1 ENSMUSG00000007892 171.36 1780.09 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
49. Hsp90aa1 ENSMUSG00000021270 169.95 1765.45 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
50. Ndufa12 ENSMUSG00000020022 169.24 1758.07 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
51. U2af2 ENSMUSG00000030435 168.54 1750.80 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
52. Eif5a ENSMUSG00000078812 167.83 1743.42 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
53. Ldha ENSMUSG00000063229 165.01 1714.13 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
54. Rps4x ENSMUSG00000031320 162.90 1692.21 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
55. Rpl23 ENSMUSG00000071415 157.96 1640.89 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
56. Eef1b2 ENSMUSG00000025967 157.25 1633.52 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
57. Tubb2b ENSMUSG00000045136 155.84 1618.87 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
58. Fkbp1a ENSMUSG00000032966 153.02 1589.58 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
59. Banf1 ENSMUSG00000024844 148.79 1545.64 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
60. Rps5 ENSMUSG00000012848 148.09 1538.36 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
61. Rrm2 ENSMUSG00000020649 147.38 1530.99 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
62. Rpl37 ENSMUSG00000041841 146.68 1523.72 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
63. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 143.15 1487.05 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
64. Cox8a ENSMUSG00000035885 141.04 1465.13 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
65. Myl6 ENSMUSG00000090841 139.63 1450.48 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
66. Ran ENSMUSG00000029430 138.92 1443.11 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
67. Grb10 ENSMUSG00000020176 133.28 1384.52 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
68. Rpl32 ENSMUSG00000057841 132.57 1377.14 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
69. Gm10800 ENSMUSG00000075014 131.16 1362.49 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
70. Rpl39-ps ENSMUSG00000036305 130.46 1355.22 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
71. Rps3a1 ENSMUSG00000028081 127.64 1325.93 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
72. Ywhab ENSMUSG00000018326 127.64 1325.93 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
73. Trim28 ENSMUSG00000005566 126.23 1311.28 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
74. Son ENSMUSG00000022961 125.52 1303.91 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
75. Pcbp1 ENSMUSG00000051695 124.11 1289.26 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
76. Pabpc1 ENSMUSG00000022283 123.41 1281.99 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
77. Gm14303 ENSMUSG00000081344 122.70 1274.61 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
78. Gm5805 ENSMUSG00000061848 122.70 1274.61 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
79. Tecr ENSMUSG00000031708 116.35 1208.65 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
80. Tuba1a ENSMUSG00000072235 116.35 1208.65 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
81. Paics ENSMUSG00000029247 115.65 1201.38 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
82. Cdkn1c ENSMUSG00000037664 112.12 1164.71 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
83. Rpl26 ENSMUSG00000060938 108.60 1128.14 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
84. Eef2 ENSMUSG00000034994 107.19 1113.49 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
85. Rpl8 ENSMUSG00000003970 105.78 1098.85 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
86. Ccnd2 ENSMUSG00000000184 105.07 1091.47 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
87. Slc25a5 ENSMUSG00000016319 104.37 1084.20 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 [Source:MGI Symbol;Acc:MGI:1353496]
88. Hmgn1 ENSMUSG00000040681 102.96 1069.55 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
89. Ywhae ENSMUSG00000020849 102.96 1069.55 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
90. Lamp1 ENSMUSG00000031447 100.14 1040.26 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
91. Ndufc2 ENSMUSG00000030647 98.72 1025.51 NADH:ubiquinone oxidoreductase subunit C2 [Source:MGI Symbol;Acc:MGI:1344370]
92. Rpl41 ENSMUSG00000093674 95.90 996.21 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
93. Erdr1 94.49 981.57 erythroid differentiation regulator 1, transcript variant 1, non-coding
94. Ngfrap1 93.08 966.92 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
95. Ago2 ENSMUSG00000036698 92.38 959.65 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
96. 2810417H13Rik 90.97 945.00 RIKEN cDNA 2810417H13 gene
97. Cdk4 ENSMUSG00000006728 90.97 945.00 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
98. Srsf3 ENSMUSG00000071172 90.97 945.00 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
99. Ddx39b ENSMUSG00000019432 90.26 937.62 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
100. Serbp1 ENSMUSG00000036371 90.26 937.62 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA