Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E10_5_slice_2, section s12.

Sample reads: 96,238. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. Ptma ENSMUSG00000026238 3230.53 33568.22 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
2. mt-Cytb ENSMUSG00000064370 3025.62 31439.01 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Nd4 ENSMUSG00000064363 1817.05 18880.84 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
4. mt-Atp6 ENSMUSG00000064357 1814.95 18859.02 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Nd1 ENSMUSG00000064341 1668.59 17338.20 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. Hbb-y ENSMUSG00000052187 1114.48 11580.49 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
7. mt-Co2 ENSMUSG00000064354 1104.03 11471.90 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Co1 ENSMUSG00000064351 922.11 9581.58 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Co3 ENSMUSG00000064358 869.84 9038.45 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
10. Eef1a1 ENSMUSG00000037742 792.47 8234.50 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
11. Hbb-bh1 ENSMUSG00000052217 679.56 7061.26 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
12. mt-Nd3 ENSMUSG00000064360 623.11 6474.69 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
13. mt-Nd2 ENSMUSG00000064345 621.02 6452.98 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
14. Tuba1b ENSMUSG00000023004 589.65 6127.01 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
15. Mdk ENSMUSG00000027239 497.65 5171.05 midkine [Source:MGI Symbol;Acc:MGI:96949]
16. Gm13340 ENSMUSG00000083563 483.01 5018.92 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
17. Pkm ENSMUSG00000032294 439.10 4562.66 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
18. Gm10800 ENSMUSG00000075014 395.19 4106.39 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
19. Nedd4 ENSMUSG00000032216 395.19 4106.39 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
20. H19 ENSMUSG00000000031 372.19 3867.40 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
21. Npm1 ENSMUSG00000057113 370.10 3845.68 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
22. mt-Rnr2 ENSMUSG00000064339 361.74 3758.82 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
23. Hba-x ENSMUSG00000055609 355.46 3693.56 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
24. mt-Nd5 ENSMUSG00000064367 342.92 3563.26 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
25. Rpl4 ENSMUSG00000032399 338.74 3519.82 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
26. Tubb5 ENSMUSG00000001525 332.46 3454.57 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
27. Paics ENSMUSG00000029247 296.92 3085.28 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
28. Eif4g2 ENSMUSG00000005610 294.83 3063.56 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
29. Ubb ENSMUSG00000019505 288.55 2998.30 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
30. Cfl1 ENSMUSG00000056201 278.10 2889.72 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
31. Hba-a1 ENSMUSG00000069919 269.73 2802.75 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
32. Tpt1 ENSMUSG00000060126 269.73 2802.75 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
33. Hsp90aa1 ENSMUSG00000021270 257.19 2672.44 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
34. Crabp1 ENSMUSG00000032291 248.82 2585.47 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
35. Tubb2b ENSMUSG00000045136 213.28 2216.18 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
36. Hnrnpc ENSMUSG00000060373 207.01 2151.03 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
37. Banf1 ENSMUSG00000024844 204.91 2129.21 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
38. Rpl18a ENSMUSG00000045128 186.10 1933.75 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
39. Top2a ENSMUSG00000020914 179.82 1868.50 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
40. Hnrnpa2b1 ENSMUSG00000004980 173.55 1803.35 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
41. Chchd2 ENSMUSG00000070493 171.46 1781.63 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
42. Gm15459 ENSMUSG00000100801 171.46 1781.63 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
43. Morf4l1 ENSMUSG00000062270 171.46 1781.63 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
44. Atp5g3 ENSMUSG00000018770 169.37 1759.91 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
45. Gm10073 ENSMUSG00000060019 169.37 1759.91 predicted pseudogene 10073 [Source:MGI Symbol;Acc:MGI:3641908]
46. Rpl23 ENSMUSG00000071415 167.28 1738.20 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
47. Hmga2 ENSMUSG00000056758 165.19 1716.48 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
48. Rps20 ENSMUSG00000028234 165.19 1716.48 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
49. Kpnb1 ENSMUSG00000001440 163.09 1694.66 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
50. Actb ENSMUSG00000029580 161.00 1672.94 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
51. U2af2 ENSMUSG00000030435 156.82 1629.51 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
52. Ran ENSMUSG00000029430 154.73 1607.79 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
53. Ldha ENSMUSG00000063229 152.64 1586.07 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
54. Eef1b2 ENSMUSG00000025967 146.37 1520.92 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
55. Hsp90ab1 ENSMUSG00000023944 146.37 1520.92 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
56. Ndufa12 ENSMUSG00000020022 144.28 1499.20 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
57. Rps26 ENSMUSG00000025362 144.28 1499.20 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
58. Srsf3 ENSMUSG00000071172 144.28 1499.20 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
59. Ywhag ENSMUSG00000051391 144.28 1499.20 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide [Source:MGI Symbol;Acc:MGI:108109]
60. Tmsb4x ENSMUSG00000049775 142.19 1477.49 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
61. Tuba1a ENSMUSG00000072235 135.91 1412.23 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
62. Cdk4 ENSMUSG00000006728 131.73 1368.80 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
63. Hnrnpk ENSMUSG00000021546 131.73 1368.80 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
64. Tmpo ENSMUSG00000019961 131.73 1368.80 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
65. Morf4l2 ENSMUSG00000031422 125.46 1303.65 mortality factor 4 like 2 [Source:MGI Symbol;Acc:MGI:1927167]
66. Ddx5 ENSMUSG00000020719 123.37 1281.93 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
67. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 123.37 1281.93 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
68. Hspe1 ENSMUSG00000073676 123.37 1281.93 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
69. Rpl34 ENSMUSG00000062006 121.28 1260.21 ribosomal protein L34 [Source:MGI Symbol;Acc:MGI:1915686]
70. Myl6 ENSMUSG00000090841 119.18 1238.39 myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318]
71. Rps12-ps9 ENSMUSG00000069862 119.18 1238.39 ribosomal protein S12, pseudogene 9 [Source:MGI Symbol;Acc:MGI:3704324]
72. Gm14303 ENSMUSG00000081344 117.09 1216.67 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
73. Hba-a2 ENSMUSG00000069917 117.09 1216.67 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
74. Cdca4 ENSMUSG00000047832 115.00 1194.96 cell division cycle associated 4 [Source:MGI Symbol;Acc:MGI:1919213]
75. Rpl32 ENSMUSG00000057841 115.00 1194.96 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
76. Rrm2 ENSMUSG00000020649 115.00 1194.96 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
77. Fscn1 ENSMUSG00000029581 112.91 1173.24 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
78. Slc25a5 ENSMUSG00000016319 112.91 1173.24 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 [Source:MGI Symbol;Acc:MGI:1353496]
79. Pcbp1 ENSMUSG00000051695 110.82 1151.52 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
80. Sfpq ENSMUSG00000028820 110.82 1151.52 splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
81. Adprh ENSMUSG00000002844 108.73 1129.81 ADP-ribosylarginine hydrolase [Source:MGI Symbol;Acc:MGI:1098234]
82. Gm5963 ENSMUSG00000052192 108.73 1129.81 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
83. Hnrnpa1 ENSMUSG00000046434 108.73 1129.81 heterogeneous nuclear ribonucleoprotein A1 [Source:MGI Symbol;Acc:MGI:104820]
84. Mrfap1 ENSMUSG00000055302 108.73 1129.81 Morf4 family associated protein 1 [Source:MGI Symbol;Acc:MGI:1914818]
85. Rpl13 ENSMUSG00000000740 108.73 1129.81 ribosomal protein L13 [Source:MGI Symbol;Acc:MGI:105922]
86. Rpl37 ENSMUSG00000041841 108.73 1129.81 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
87. Trp53i11 ENSMUSG00000068735 108.73 1129.81 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
88. Cdkn1c ENSMUSG00000037664 106.64 1108.09 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
89. Ddx39b ENSMUSG00000019432 104.55 1086.37 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
90. H3f3b ENSMUSG00000016559 104.55 1086.37 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
91. Psat1 ENSMUSG00000024640 104.55 1086.37 phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
92. Gm8292 ENSMUSG00000100215 102.46 1064.65 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
93. Ywhab ENSMUSG00000018326 102.46 1064.65 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
94. Anp32b ENSMUSG00000028333 100.37 1042.94 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
95. Atp5c1 ENSMUSG00000025781 100.37 1042.94 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 [Source:MGI Symbol;Acc:MGI:1261437]
96. Fkbp1a ENSMUSG00000032966 100.37 1042.94 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
97. Igf2 ENSMUSG00000048583 100.37 1042.94 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
98. Rplp1 ENSMUSG00000007892 100.37 1042.94 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
99. Tead2 ENSMUSG00000030796 100.37 1042.94 TEA domain family member 2 [Source:MGI Symbol;Acc:MGI:104904]
100. Gm14586 ENSMUSG00000083621 98.28 1021.22 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA