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Experiment Mouse_E10_5_slice_2, section s10.

Sample reads: 96,237. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3017.43 31354.24 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. Ptma ENSMUSG00000026238 2954.71 30702.52 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Atp6 ENSMUSG00000064357 2316.89 24074.90 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Co2 ENSMUSG00000064354 1935.91 20116.12 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd1 ENSMUSG00000064341 1819.70 18908.58 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Nd4 ENSMUSG00000064363 1778.11 18476.42 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Rnr2 ENSMUSG00000064339 1302.05 13529.66 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
8. mt-Co1 ENSMUSG00000064351 1007.57 10469.70 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Nd2 ENSMUSG00000064345 895.33 9303.41 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. Hbb-y ENSMUSG00000052187 796.95 8281.14 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
11. Actb ENSMUSG00000029580 672.16 6984.44 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. Eef1a1 ENSMUSG00000037742 544.06 5653.35 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
13. mt-Nd3 ENSMUSG00000064360 537.46 5584.77 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
14. Rpsa ENSMUSG00000032518 437.10 4541.92 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
15. mt-Co3 ENSMUSG00000064358 426.53 4432.09 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
16. Mdk ENSMUSG00000027239 412.67 4288.07 midkine [Source:MGI Symbol;Acc:MGI:96949]
17. mt-Rnr1 ENSMUSG00000064337 334.76 3478.51 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
18. H19 ENSMUSG00000000031 319.57 3320.67 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
19. Set ENSMUSG00000054766 319.57 3320.67 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
20. Cfl1 ENSMUSG00000056201 317.59 3300.09 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
21. Npm1 ENSMUSG00000057113 316.93 3293.23 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
22. mt-Nd5 ENSMUSG00000064367 305.04 3169.68 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
23. Gm13340 ENSMUSG00000083563 303.72 3155.97 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
24. Pkm ENSMUSG00000032294 301.74 3135.39 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
25. Ybx1 ENSMUSG00000028639 278.63 2895.26 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
26. Tmsb4x ENSMUSG00000049775 277.31 2881.54 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
27. Tuba1b ENSMUSG00000023004 273.35 2840.39 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
28. Hba-a1 ENSMUSG00000069919 268.07 2785.53 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
29. Tubb5 ENSMUSG00000001525 268.07 2785.53 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
30. Hba-x ENSMUSG00000055609 264.11 2744.38 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
31. Hbb-bh1 ENSMUSG00000052217 250.24 2600.25 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
32. Nedd4 ENSMUSG00000032216 238.36 2476.81 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
33. Hsp90ab1 ENSMUSG00000023944 230.43 2394.41 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
34. Eif5a ENSMUSG00000078812 224.49 2332.69 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
35. Rpl4 ENSMUSG00000032399 223.17 2318.97 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
36. Rps26 ENSMUSG00000025362 221.85 2305.25 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
37. Ubb ENSMUSG00000019505 217.89 2264.10 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
38. U2af2 ENSMUSG00000030435 215.25 2236.67 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
39. Tpt1 ENSMUSG00000060126 209.97 2181.81 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
40. Atp5g3 ENSMUSG00000018770 204.02 2119.98 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
41. Ran ENSMUSG00000029430 204.02 2119.98 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
42. Eif4g2 ENSMUSG00000005610 195.44 2030.83 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
43. Chchd2 ENSMUSG00000070493 191.48 1989.68 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
44. Rplp1 ENSMUSG00000007892 190.16 1975.96 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
45. Hsp90aa1 ENSMUSG00000021270 176.29 1831.84 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
46. Rps20 ENSMUSG00000028234 176.29 1831.84 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
47. Igf2 ENSMUSG00000048583 175.63 1824.98 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
48. Hmga2 ENSMUSG00000056758 174.97 1818.12 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
49. Eef1b2 ENSMUSG00000025967 173.65 1804.40 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
50. Tubb2b ENSMUSG00000045136 172.99 1797.55 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
51. Hnrnpc ENSMUSG00000060373 170.35 1770.11 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
52. Rpl23 ENSMUSG00000071415 162.43 1687.82 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
53. Pabpc1 ENSMUSG00000022283 161.11 1674.10 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
54. Rpl18a ENSMUSG00000045128 155.16 1612.27 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
55. Rrm2 ENSMUSG00000020649 154.50 1605.42 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
56. Rps5 ENSMUSG00000012848 153.18 1591.70 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
57. Rpl39-ps ENSMUSG00000036305 150.54 1564.27 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
58. Gm14303 ENSMUSG00000081344 149.22 1550.55 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
59. Hba-a2 ENSMUSG00000069917 149.22 1550.55 hemoglobin alpha, adult chain 2 [Source:MGI Symbol;Acc:MGI:96016]
60. Cox8a ENSMUSG00000035885 140.64 1461.40 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
61. Rps4x ENSMUSG00000031320 137.34 1427.11 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
62. Trim28 ENSMUSG00000005566 137.34 1427.11 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
63. Banf1 ENSMUSG00000024844 136.02 1413.39 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
64. Pcbp1 ENSMUSG00000051695 136.02 1413.39 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
65. Ywhab ENSMUSG00000018326 136.02 1413.39 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
66. Rpl37 ENSMUSG00000041841 134.03 1392.71 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
67. Ndufa12 ENSMUSG00000020022 130.07 1351.56 NADH:ubiquinone oxidoreductase subunit A12 [Source:MGI Symbol;Acc:MGI:1913664]
68. Ldha ENSMUSG00000063229 129.41 1344.70 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
69. Malat1 ENSMUSG00000092341 129.41 1344.70 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
70. Paics ENSMUSG00000029247 128.09 1330.99 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
71. Gm10800 ENSMUSG00000075014 127.43 1324.13 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
72. Fkbp1a ENSMUSG00000032966 121.49 1262.41 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
73. Grb10 ENSMUSG00000020176 116.21 1207.54 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
74. Rpl32 ENSMUSG00000057841 116.21 1207.54 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
75. Anp32b ENSMUSG00000028333 115.55 1200.68 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
76. 2810417H13Rik 114.89 1193.83 RIKEN cDNA 2810417H13 gene
77. Gm10073 ENSMUSG00000060019 107.62 1118.28 predicted pseudogene 10073 [Source:MGI Symbol;Acc:MGI:3641908]
78. Gm14586 ENSMUSG00000083621 107.62 1118.28 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
79. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 106.30 1104.57 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
80. Ccnd2 ENSMUSG00000000184 104.32 1083.99 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
81. Sub1 ENSMUSG00000022205 103.00 1070.28 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
82. Ago2 ENSMUSG00000036698 101.68 1056.56 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
83. Rpl8 ENSMUSG00000003970 101.02 1049.70 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
84. Son ENSMUSG00000022961 100.36 1042.84 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
85. Rps3a1 ENSMUSG00000028081 98.38 1022.27 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
86. Gm5963 ENSMUSG00000052192 97.72 1015.41 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
87. Lamp1 ENSMUSG00000031447 97.72 1015.41 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
88. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 95.74 994.84 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
89. H2afy ENSMUSG00000015937 95.08 987.98 H2A histone family, member Y [Source:MGI Symbol;Acc:MGI:1349392]
90. Hnrnpa2b1 ENSMUSG00000004980 94.42 981.12 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
91. Stmn1 ENSMUSG00000028832 94.42 981.12 stathmin 1 [Source:MGI Symbol;Acc:MGI:96739]
92. Ywhae ENSMUSG00000020849 92.44 960.55 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
93. Srsf3 ENSMUSG00000071172 91.12 946.83 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
94. Tecr ENSMUSG00000031708 91.12 946.83 trans-2,3-enoyl-CoA reductase [Source:MGI Symbol;Acc:MGI:1915408]
95. Cdk4 ENSMUSG00000006728 89.14 926.26 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
96. Fscn1 ENSMUSG00000029581 89.14 926.26 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
97. Rpl26 ENSMUSG00000060938 89.14 926.26 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
98. Rpl41 ENSMUSG00000093674 87.82 912.54 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
99. Crabp1 ENSMUSG00000032291 86.50 898.83 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
100. Hmgn1 ENSMUSG00000040681 86.50 898.83 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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