Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_1, section s82.

Sample reads: 96,246. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Atp6 ENSMUSG00000064357 5994.62 62500.50 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
2. mt-Rnr2 ENSMUSG00000064339 5661.58 59028.19 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
3. mt-Nd1 ENSMUSG00000064341 4329.45 45139.27 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. mt-Co2 ENSMUSG00000064354 2664.27 27777.94 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Rnr1 ENSMUSG00000064337 2664.27 27777.94 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
6. mt-Cytb ENSMUSG00000064370 2331.24 24305.74 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
7. mt-Co1 ENSMUSG00000064351 1665.17 17361.23 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Nd5 ENSMUSG00000064367 1332.14 13889.02 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
9. Actb ENSMUSG00000029580 999.10 10416.71 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
10. Eef1a1 ENSMUSG00000037742 999.10 10416.71 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
11. Gm10800 ENSMUSG00000075014 999.10 10416.71 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
12. Gm17132 ENSMUSG00000061331 999.10 10416.71 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
13. Ptma ENSMUSG00000026238 999.10 10416.71 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
14. mt-Co3 ENSMUSG00000064358 999.10 10416.71 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
15. mt-Nd2 ENSMUSG00000064345 999.10 10416.71 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
16. mt-Nd4 ENSMUSG00000064363 999.10 10416.71 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
17. Ccdc34 ENSMUSG00000027160 666.07 6944.51 coiled-coil domain containing 34 [Source:MGI Symbol;Acc:MGI:1915451]
18. Chd7 ENSMUSG00000041235 666.07 6944.51 chromodomain helicase DNA binding protein 7 [Source:MGI Symbol;Acc:MGI:2444748]
19. Col3a1 ENSMUSG00000026043 666.07 6944.51 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
20. Dctn1 ENSMUSG00000031865 666.07 6944.51 dynactin 1 [Source:MGI Symbol;Acc:MGI:107745]
21. Flrt3 ENSMUSG00000051379 666.07 6944.51 fibronectin leucine rich transmembrane protein 3 [Source:MGI Symbol;Acc:MGI:1918686]
22. Gm26870 ENSMUSG00000097312 666.07 6944.51 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
23. Mfap3 ENSMUSG00000020522 666.07 6944.51 microfibrillar-associated protein 3 [Source:MGI Symbol;Acc:MGI:1924068]
24. Prrc2c ENSMUSG00000040225 666.07 6944.51 proline-rich coiled-coil 2C [Source:MGI Symbol;Acc:MGI:1913754]
25. Srsf6 ENSMUSG00000016921 666.07 6944.51 serine/arginine-rich splicing factor 6 [Source:MGI Symbol;Acc:MGI:1915246]
26. Tmed10 ENSMUSG00000021248 666.07 6944.51 transmembrane p24 trafficking protein 10 [Source:MGI Symbol;Acc:MGI:1915831]
27. 2610008E11Rik ENSMUSG00000060301 333.03 3472.20 RIKEN cDNA 2610008E11 gene [Source:MGI Symbol;Acc:MGI:1919378]
28. Aars ENSMUSG00000031960 333.03 3472.20 alanyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:2384560]
29. Abcd1 ENSMUSG00000031378 333.03 3472.20 ATP-binding cassette, sub-family D (ALD), member 1 [Source:MGI Symbol;Acc:MGI:1349215]
30. Abhd17c ENSMUSG00000038459 333.03 3472.20 abhydrolase domain containing 17C [Source:MGI Symbol;Acc:MGI:1917428]
31. Acad9 ENSMUSG00000027710 333.03 3472.20 acyl-Coenzyme A dehydrogenase family, member 9 [Source:MGI Symbol;Acc:MGI:1914272]
32. Adprh ENSMUSG00000002844 333.03 3472.20 ADP-ribosylarginine hydrolase [Source:MGI Symbol;Acc:MGI:1098234]
33. Ago1 ENSMUSG00000041530 333.03 3472.20 argonaute RISC catalytic subunit 1 [Source:MGI Symbol;Acc:MGI:2446630]
34. Amotl2 ENSMUSG00000032531 333.03 3472.20 angiomotin-like 2 [Source:MGI Symbol;Acc:MGI:1929286]
35. Ankrd11 ENSMUSG00000035569 333.03 3472.20 ankyrin repeat domain 11 [Source:MGI Symbol;Acc:MGI:1924337]
36. Arhgef2 ENSMUSG00000028059 333.03 3472.20 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:MGI Symbol;Acc:MGI:103264]
37. Arl1 ENSMUSG00000060904 333.03 3472.20 ADP-ribosylation factor-like 1 [Source:MGI Symbol;Acc:MGI:99436]
38. Arl2 ENSMUSG00000024944 333.03 3472.20 ADP-ribosylation factor-like 2 [Source:MGI Symbol;Acc:MGI:1928393]
39. Atad2 ENSMUSG00000022360, ENSMUSG00000116053 333.03 3472.20 ATPase family, AAA domain containing 2 [Source:MGI Symbol;Acc:MGI:1917722]
40. Atp6v1f ENSMUSG00000004285 333.03 3472.20 ATPase, H+ transporting, lysosomal V1 subunit F [Source:MGI Symbol;Acc:MGI:1913394]
41. Aurkaip1 ENSMUSG00000065990 333.03 3472.20 aurora kinase A interacting protein 1 [Source:MGI Symbol;Acc:MGI:1913327]
42. Bai3 Bai3 333.03 3472.20
43. Basp1 ENSMUSG00000045763 333.03 3472.20 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
44. Baz1b ENSMUSG00000002748 333.03 3472.20 bromodomain adjacent to zinc finger domain, 1B [Source:MGI Symbol;Acc:MGI:1353499]
45. Bcl2l12 ENSMUSG00000003190 333.03 3472.20 BCL2-like 12 (proline rich) [Source:MGI Symbol;Acc:MGI:1922986]
46. Bmpr1a ENSMUSG00000021796 333.03 3472.20 bone morphogenetic protein receptor, type 1A [Source:MGI Symbol;Acc:MGI:1338938]
47. Brd1 ENSMUSG00000022387 333.03 3472.20 bromodomain containing 1 [Source:MGI Symbol;Acc:MGI:1924161]
48. Brd3 ENSMUSG00000026918 333.03 3472.20 bromodomain containing 3 [Source:MGI Symbol;Acc:MGI:1914632]
49. Canx ENSMUSG00000020368 333.03 3472.20 calnexin [Source:MGI Symbol;Acc:MGI:88261]
50. Ccni ENSMUSG00000063015 333.03 3472.20 cyclin I [Source:MGI Symbol;Acc:MGI:1341077]
51. Cdv3 ENSMUSG00000032803 333.03 3472.20 carnitine deficiency-associated gene expressed in ventricle 3 [Source:MGI Symbol;Acc:MGI:2448759]
52. Chmp5 ENSMUSG00000028419 333.03 3472.20 charged multivesicular body protein 5 [Source:MGI Symbol;Acc:MGI:1924209]
53. Chmp6 ENSMUSG00000025371 333.03 3472.20 charged multivesicular body protein 6 [Source:MGI Symbol;Acc:MGI:3583942]
54. Cln3 ENSMUSG00000030720 333.03 3472.20 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) [Source:MGI Symbol;Acc:MGI:107537]
55. Cnnm3 ENSMUSG00000001138 333.03 3472.20 cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
56. Cnpy2 ENSMUSG00000025381 333.03 3472.20 canopy FGF signaling regulator 2 [Source:MGI Symbol;Acc:MGI:1928477]
57. Dlg4 ENSMUSG00000020886 333.03 3472.20 discs large MAGUK scaffold protein 4 [Source:MGI Symbol;Acc:MGI:1277959]
58. Dtwd2 ENSMUSG00000024505 333.03 3472.20 DTW domain containing 2 [Source:MGI Symbol;Acc:MGI:1916107]
59. Dut ENSMUSG00000027203 333.03 3472.20 deoxyuridine triphosphatase [Source:MGI Symbol;Acc:MGI:1346051]
60. Dyrk3 ENSMUSG00000016526 333.03 3472.20 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 [Source:MGI Symbol;Acc:MGI:1330300]
61. Egln2 ENSMUSG00000058709 333.03 3472.20 egl-9 family hypoxia-inducible factor 2 [Source:MGI Symbol;Acc:MGI:1932287]
62. Eif4a1 ENSMUSG00000059796 333.03 3472.20 eukaryotic translation initiation factor 4A1 [Source:MGI Symbol;Acc:MGI:95303]
63. Eif4g2 ENSMUSG00000005610 333.03 3472.20 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
64. Fam175a 333.03 3472.20 family with sequence similarity 175, member A, transcript variant X2
65. Fam192a ENSMUSG00000031774 333.03 3472.20 family with sequence similarity 192, member A [Source:MGI Symbol;Acc:MGI:1919637]
66. Fez1 ENSMUSG00000032118 333.03 3472.20 fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
67. Fgfrl1 ENSMUSG00000008090 333.03 3472.20 fibroblast growth factor receptor-like 1 [Source:MGI Symbol;Acc:MGI:2150920]
68. Foxc1 ENSMUSG00000050295 333.03 3472.20 forkhead box C1 [Source:MGI Symbol;Acc:MGI:1347466]
69. G3bp1 ENSMUSG00000018583 333.03 3472.20 GTPase activating protein (SH3 domain) binding protein 1 [Source:MGI Symbol;Acc:MGI:1351465]
70. Gas1 ENSMUSG00000052957 333.03 3472.20 growth arrest specific 1 [Source:MGI Symbol;Acc:MGI:95655]
71. Gcc2 ENSMUSG00000038039, ENSMUSG00000107275 333.03 3472.20 GRIP and coiled-coil domain containing 2 [Source:MGI Symbol;Acc:MGI:1917547]
72. Gm13936 ENSMUSG00000085444 333.03 3472.20 predicted gene 13936 [Source:MGI Symbol;Acc:MGI:3651878]
73. Gm15662 Gm15662 333.03 3472.20
74. Gm17555 ENSMUSG00000090353 333.03 3472.20 predicted gene, 17555 [Source:MGI Symbol;Acc:MGI:4937189]
75. Gm21897 ENSMUSG00000094472 333.03 3472.20 predicted gene, 21897 [Source:MGI Symbol;Acc:MGI:5434061]
76. Gm3244 333.03 3472.20 predicted pseudogene 3244
77. Gm5805 ENSMUSG00000061848 333.03 3472.20 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
78. Gm7536 ENSMUSG00000057036 333.03 3472.20 predicted gene 7536 [Source:MGI Symbol;Acc:MGI:3645137]
79. Gm9385 ENSMUSG00000080848 333.03 3472.20 predicted pseudogene 9385 [Source:MGI Symbol;Acc:MGI:3646182]
80. H19 ENSMUSG00000000031 333.03 3472.20 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
81. Hbb-y ENSMUSG00000052187 333.03 3472.20 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
82. Hmga2 ENSMUSG00000056758 333.03 3472.20 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
83. Hnrnpa2b1 ENSMUSG00000004980 333.03 3472.20 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
84. Hoxc6 ENSMUSG00000001661 333.03 3472.20 homeobox C6 [Source:MGI Symbol;Acc:MGI:96197]
85. Hoxc8 ENSMUSG00000001657 333.03 3472.20 homeobox C8 [Source:MGI Symbol;Acc:MGI:96198]
86. Hsp90ab1 ENSMUSG00000023944 333.03 3472.20 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
87. Hspe1 ENSMUSG00000073676 333.03 3472.20 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
88. Igf2 ENSMUSG00000048583 333.03 3472.20 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
89. Irak1 ENSMUSG00000031392 333.03 3472.20 interleukin-1 receptor-associated kinase 1 [Source:MGI Symbol;Acc:MGI:107420]
90. Isca2 ENSMUSG00000021241 333.03 3472.20 iron-sulfur cluster assembly 2 [Source:MGI Symbol;Acc:MGI:1921566]
91. Jam3 ENSMUSG00000031990 333.03 3472.20 junction adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:1933825]
92. Kif5b ENSMUSG00000006740 333.03 3472.20 kinesin family member 5B [Source:MGI Symbol;Acc:MGI:1098268]
93. Lamp2 ENSMUSG00000016534 333.03 3472.20 lysosomal-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:96748]
94. Lgals1 ENSMUSG00000068220 333.03 3472.20 lectin, galactose binding, soluble 1 [Source:MGI Symbol;Acc:MGI:96777]
95. Lpp ENSMUSG00000033306 333.03 3472.20 LIM domain containing preferred translocation partner in lipoma [Source:MGI Symbol;Acc:MGI:2441849]
96. Lsm4 ENSMUSG00000031848, ENSMUSG00000110900 333.03 3472.20 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1354692]
97. Luzp1 ENSMUSG00000001089 333.03 3472.20 leucine zipper protein 1 [Source:MGI Symbol;Acc:MGI:107629]
98. Malat1 ENSMUSG00000092341 333.03 3472.20 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
99. Map4k4 ENSMUSG00000026074 333.03 3472.20 mitogen-activated protein kinase kinase kinase kinase 4 [Source:MGI Symbol;Acc:MGI:1349394]
100. Marcks ENSMUSG00000069662 333.03 3472.20 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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