Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E10_5_slice_1, section s81.

Sample reads: 96,248. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Cytb ENSMUSG00000064370 3635.23 37769.37 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
2. mt-Rnr2 ENSMUSG00000064339 3462.12 35970.78 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
3. mt-Co1 ENSMUSG00000064351 2423.48 25179.51 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
4. mt-Atp6 ENSMUSG00000064357 2250.38 23381.03 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. Ptma ENSMUSG00000026238 2077.27 21582.45 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
6. mt-Nd1 ENSMUSG00000064341 1904.17 19783.97 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Rnr1 ENSMUSG00000064337 1731.06 17985.39 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
8. mt-Nd4 ENSMUSG00000064363 1384.85 14388.33 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
9. mt-Nd2 ENSMUSG00000064345 1211.74 12589.75 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. mt-Nd3 ENSMUSG00000064360 865.53 8992.70 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. Actb ENSMUSG00000029580 692.42 7194.12 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. Ybx1 ENSMUSG00000028639 692.42 7194.12 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
13. mt-Co2 ENSMUSG00000064354 692.42 7194.12 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
14. mt-Co3 ENSMUSG00000064358 692.42 7194.12 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
15. mt-Nd5 ENSMUSG00000064367 692.42 7194.12 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
16. Cfl1 ENSMUSG00000056201 519.32 5395.64 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
17. Cul3 ENSMUSG00000004364 519.32 5395.64 cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
18. Eef1a1 ENSMUSG00000037742 519.32 5395.64 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
19. Gm13340 ENSMUSG00000083563 519.32 5395.64 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
20. H19 ENSMUSG00000000031 519.32 5395.64 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
21. Rpl23 ENSMUSG00000071415 519.32 5395.64 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
22. Rplp1 ENSMUSG00000007892 519.32 5395.64 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
23. 2610018G03Rik 2610018G03Rik 346.21 3597.06
24. Aaas ENSMUSG00000036678 346.21 3597.06 achalasia, adrenocortical insufficiency, alacrimia [Source:MGI Symbol;Acc:MGI:2443767]
25. Anp32b ENSMUSG00000028333 346.21 3597.06 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
26. Atp5g3 ENSMUSG00000018770 346.21 3597.06 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
27. Cbll1 ENSMUSG00000020659 346.21 3597.06 Casitas B-lineage lymphoma-like 1 [Source:MGI Symbol;Acc:MGI:2144842]
28. Dact1 ENSMUSG00000044548 346.21 3597.06 dishevelled-binding antagonist of beta-catenin 1 [Source:MGI Symbol;Acc:MGI:1891740]
29. Dennd5a ENSMUSG00000035901 346.21 3597.06 DENN/MADD domain containing 5A [Source:MGI Symbol;Acc:MGI:1201681]
30. Dhx15 ENSMUSG00000029169 346.21 3597.06 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Source:MGI Symbol;Acc:MGI:1099786]
31. Fkbp1a ENSMUSG00000032966 346.21 3597.06 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
32. Gata6 ENSMUSG00000005836 346.21 3597.06 GATA binding protein 6 [Source:MGI Symbol;Acc:MGI:107516]
33. Gm10800 ENSMUSG00000075014 346.21 3597.06 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
34. Gm13936 ENSMUSG00000085444 346.21 3597.06 predicted gene 13936 [Source:MGI Symbol;Acc:MGI:3651878]
35. Gm14303 ENSMUSG00000081344 346.21 3597.06 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
36. Gm17132 ENSMUSG00000061331 346.21 3597.06 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
37. Hnrnpdl ENSMUSG00000029328 346.21 3597.06 heterogeneous nuclear ribonucleoprotein D-like [Source:MGI Symbol;Acc:MGI:1355299]
38. Mdk ENSMUSG00000027239 346.21 3597.06 midkine [Source:MGI Symbol;Acc:MGI:96949]
39. Mettl16 ENSMUSG00000010554 346.21 3597.06 methyltransferase like 16 [Source:MGI Symbol;Acc:MGI:1914743]
40. Ncl ENSMUSG00000026234 346.21 3597.06 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
41. Nedd4 ENSMUSG00000032216 346.21 3597.06 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
42. Npy1r ENSMUSG00000036437 346.21 3597.06 neuropeptide Y receptor Y1 [Source:MGI Symbol;Acc:MGI:104963]
43. Pabpc1 ENSMUSG00000022283 346.21 3597.06 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
44. Pcgf3 ENSMUSG00000033623 346.21 3597.06 polycomb group ring finger 3 [Source:MGI Symbol;Acc:MGI:1916837]
45. Pdap1 ENSMUSG00000029623 346.21 3597.06 PDGFA associated protein 1 [Source:MGI Symbol;Acc:MGI:2448536]
46. Peg3 ENSMUSG00000002265 346.21 3597.06 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
47. Peli1 ENSMUSG00000020134 346.21 3597.06 pellino 1 [Source:MGI Symbol;Acc:MGI:1914495]
48. Pkm ENSMUSG00000032294 346.21 3597.06 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
49. Ptbp3 ENSMUSG00000028382 346.21 3597.06 polypyrimidine tract binding protein 3 [Source:MGI Symbol;Acc:MGI:1923334]
50. Ptov1 ENSMUSG00000038502 346.21 3597.06 prostate tumor over expressed gene 1 [Source:MGI Symbol;Acc:MGI:1933946]
51. Puf60 ENSMUSG00000002524 346.21 3597.06 poly-U binding splicing factor 60 [Source:MGI Symbol;Acc:MGI:1915209]
52. Rpl4 ENSMUSG00000032399 346.21 3597.06 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
53. Rps16-ps2 ENSMUSG00000060419 346.21 3597.06 ribosomal protein S16, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3704259]
54. Rps3a1 ENSMUSG00000028081 346.21 3597.06 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
55. Rpsa ENSMUSG00000032518 346.21 3597.06 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
56. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 346.21 3597.06 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
57. Sfrs18 Sfrs18 346.21 3597.06
58. Srsf1 ENSMUSG00000018379, ENSMUSG00000098301 346.21 3597.06 serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]
59. Tmsb4x ENSMUSG00000049775 346.21 3597.06 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
60. Tubb5 ENSMUSG00000001525 346.21 3597.06 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
61. Vezf1 ENSMUSG00000018377, ENSMUSG00000098546 346.21 3597.06 vascular endothelial zinc finger 1 [Source:MGI Symbol;Acc:MGI:1313291]
62. Wdfy3 ENSMUSG00000043940 346.21 3597.06 WD repeat and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:1096875]
63. 1110058L19Rik 1110058L19Rik 173.11 1798.58
64. 2310033P09Rik ENSMUSG00000020441 173.11 1798.58 RIKEN cDNA 2310033P09 gene [Source:MGI Symbol;Acc:MGI:1915112]
65. 2810417H13Rik 173.11 1798.58 RIKEN cDNA 2810417H13 gene
66. 6430548M08Rik ENSMUSG00000031824 173.11 1798.58 RIKEN cDNA 6430548M08 gene [Source:MGI Symbol;Acc:MGI:2443793]
67. 9930014A18Rik ENSMUSG00000097493 173.11 1798.58 RIKEN cDNA 9930014A18 gene [Source:MGI Symbol;Acc:MGI:2444091]
68. A830010M20Rik 173.11 1798.58 RIKEN cDNA A830010M20 gene, transcript variant 2
69. Aasdhppt ENSMUSG00000025894 173.11 1798.58 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:MGI Symbol;Acc:MGI:1914868]
70. Abhd16a ENSMUSG00000007036 173.11 1798.58 abhydrolase domain containing 16A [Source:MGI Symbol;Acc:MGI:99476]
71. Abl1 ENSMUSG00000026842 173.11 1798.58 c-abl oncogene 1, non-receptor tyrosine kinase [Source:MGI Symbol;Acc:MGI:87859]
72. Acsl3 ENSMUSG00000032883 173.11 1798.58 acyl-CoA synthetase long-chain family member 3 [Source:MGI Symbol;Acc:MGI:1921455]
73. Actr1a ENSMUSG00000025228 173.11 1798.58 ARP1 actin-related protein 1A, centractin alpha [Source:MGI Symbol;Acc:MGI:1858964]
74. Adamts18 ENSMUSG00000053399 173.11 1798.58 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 [Source:MGI Symbol;Acc:MGI:2442600]
75. Adprh ENSMUSG00000002844 173.11 1798.58 ADP-ribosylarginine hydrolase [Source:MGI Symbol;Acc:MGI:1098234]
76. Adss ENSMUSG00000015961 173.11 1798.58 adenylosuccinate synthetase, non muscle [Source:MGI Symbol;Acc:MGI:87948]
77. Anp32a ENSMUSG00000032249 173.11 1798.58 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:MGI Symbol;Acc:MGI:108447]
78. Anxa6 ENSMUSG00000018340 173.11 1798.58 annexin A6 [Source:MGI Symbol;Acc:MGI:88255]
79. Aox3 ENSMUSG00000064294 173.11 1798.58 aldehyde oxidase 3 [Source:MGI Symbol;Acc:MGI:1918974]
80. Ap4m1 ENSMUSG00000019518 173.11 1798.58 adaptor-related protein complex AP-4, mu 1 [Source:MGI Symbol;Acc:MGI:1337063]
81. Aplp2 ENSMUSG00000031996 173.11 1798.58 amyloid beta (A4) precursor-like protein 2 [Source:MGI Symbol;Acc:MGI:88047]
82. Arfgef1 ENSMUSG00000067851 173.11 1798.58 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) [Source:MGI Symbol;Acc:MGI:2442988]
83. Arglu1 ENSMUSG00000040459 173.11 1798.58 arginine and glutamate rich 1 [Source:MGI Symbol;Acc:MGI:2442985]
84. Arhgap5 ENSMUSG00000035133 173.11 1798.58 Rho GTPase activating protein 5 [Source:MGI Symbol;Acc:MGI:1332637]
85. Arid4b ENSMUSG00000039219 173.11 1798.58 AT rich interactive domain 4B (RBP1-like) [Source:MGI Symbol;Acc:MGI:2137512]
86. Arl6ip1 ENSMUSG00000030654 173.11 1798.58 ADP-ribosylation factor-like 6 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1858943]
87. Ash1l ENSMUSG00000028053 173.11 1798.58 ASH1 like histone lysine methyltransferase [Source:MGI Symbol;Acc:MGI:2183158]
88. Ash2l ENSMUSG00000031575 173.11 1798.58 ASH2 like histone lysine methyltransferase complex subunit [Source:MGI Symbol;Acc:MGI:1344416]
89. Asxl2 ENSMUSG00000037486 173.11 1798.58 additional sex combs like 2, transcriptional regulator [Source:MGI Symbol;Acc:MGI:1922552]
90. Atox1 ENSMUSG00000018585 173.11 1798.58 antioxidant 1 copper chaperone [Source:MGI Symbol;Acc:MGI:1333855]
91. Atxn10 ENSMUSG00000016541 173.11 1798.58 ataxin 10 [Source:MGI Symbol;Acc:MGI:1859293]
92. Atxn7l3b ENSMUSG00000074748 173.11 1798.58 ataxin 7-like 3B [Source:MGI Symbol;Acc:MGI:1914971]
93. B230307C23Rik ENSMUSG00000080717 173.11 1798.58 RIKEN cDNA B230307C23 gene [Source:MGI Symbol;Acc:MGI:3643396]
94. Bach1 ENSMUSG00000025612 173.11 1798.58 BTB and CNC homology 1, basic leucine zipper transcription factor 1 [Source:MGI Symbol;Acc:MGI:894680]
95. Bckdhb ENSMUSG00000032263 173.11 1798.58 branched chain ketoacid dehydrogenase E1, beta polypeptide [Source:MGI Symbol;Acc:MGI:88137]
96. Bnc2 ENSMUSG00000028487 173.11 1798.58 basonuclin 2 [Source:MGI Symbol;Acc:MGI:2443805]
97. Bpgm ENSMUSG00000038871 173.11 1798.58 2,3-bisphosphoglycerate mutase [Source:MGI Symbol;Acc:MGI:1098242]
98. Bptf ENSMUSG00000040481 173.11 1798.58 bromodomain PHD finger transcription factor [Source:MGI Symbol;Acc:MGI:2444008]
99. Brd4 ENSMUSG00000024002 173.11 1798.58 bromodomain containing 4 [Source:MGI Symbol;Acc:MGI:1888520]
100. Brd9 ENSMUSG00000057649 173.11 1798.58 bromodomain containing 9 [Source:MGI Symbol;Acc:MGI:2145317]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA