Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_1, section s79.

Sample reads: 96,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 8749.72 90909.23 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. Gm10800 ENSMUSG00000075014 5249.83 54545.52 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
3. Btaf1 ENSMUSG00000040565 3499.89 36363.71 B-TFIID TATA-box binding protein associated factor 1 [Source:MGI Symbol;Acc:MGI:2147538]
4. Tnfaip1 ENSMUSG00000017615 3499.89 36363.71 tumor necrosis factor, alpha-induced protein 1 (endothelial) [Source:MGI Symbol;Acc:MGI:104961]
5. Tomm70a ENSMUSG00000022752 3499.89 36363.71 translocase of outer mitochondrial membrane 70A [Source:MGI Symbol;Acc:MGI:106295]
6. mt-Nd2 ENSMUSG00000064345 3499.89 36363.71 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
7. 1110058L19Rik 1110058L19Rik 1749.94 18181.80
8. Add3 ENSMUSG00000025026 1749.94 18181.80 adducin 3 (gamma) [Source:MGI Symbol;Acc:MGI:1351615]
9. Atp5d ENSMUSG00000003072 1749.94 18181.80 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit [Source:MGI Symbol;Acc:MGI:1913293]
10. Cxx1b 1749.94 18181.80 CAAX box 1B
11. Dnaja2 ENSMUSG00000031701 1749.94 18181.80 DnaJ heat shock protein family (Hsp40) member A2 [Source:MGI Symbol;Acc:MGI:1931882]
12. Eef1a1 ENSMUSG00000037742 1749.94 18181.80 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
13. Elp2 ENSMUSG00000024271 1749.94 18181.80 elongator acetyltransferase complex subunit 2 [Source:MGI Symbol;Acc:MGI:1889642]
14. Frmd4b ENSMUSG00000030064 1749.94 18181.80 FERM domain containing 4B [Source:MGI Symbol;Acc:MGI:2141794]
15. G3bp1 ENSMUSG00000018583 1749.94 18181.80 GTPase activating protein (SH3 domain) binding protein 1 [Source:MGI Symbol;Acc:MGI:1351465]
16. Gab2 ENSMUSG00000004508 1749.94 18181.80 growth factor receptor bound protein 2-associated protein 2 [Source:MGI Symbol;Acc:MGI:1333854]
17. Gipc1 ENSMUSG00000019433 1749.94 18181.80 GIPC PDZ domain containing family, member 1 [Source:MGI Symbol;Acc:MGI:1926252]
18. Gm11168 ENSMUSG00000096385 1749.94 18181.80 predicted gene 11168 [Source:MGI Symbol;Acc:MGI:3779420]
19. Gm15148 ENSMUSG00000082423 1749.94 18181.80 predicted gene 15148 [Source:MGI Symbol;Acc:MGI:3705350]
20. Gm17132 ENSMUSG00000061331 1749.94 18181.80 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
21. Gm21897 ENSMUSG00000094472 1749.94 18181.80 predicted gene, 21897 [Source:MGI Symbol;Acc:MGI:5434061]
22. Gm26924 Gm26924 1749.94 18181.80
23. Gnl3 ENSMUSG00000042354 1749.94 18181.80 guanine nucleotide binding protein-like 3 (nucleolar) [Source:MGI Symbol;Acc:MGI:1353651]
24. Hsp90aa1 ENSMUSG00000021270 1749.94 18181.80 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
25. Kif20b ENSMUSG00000024795 1749.94 18181.80 kinesin family member 20B [Source:MGI Symbol;Acc:MGI:2444576]
26. Mrpl13 ENSMUSG00000022370 1749.94 18181.80 mitochondrial ribosomal protein L13 [Source:MGI Symbol;Acc:MGI:2137218]
27. Mycn ENSMUSG00000037169 1749.94 18181.80 v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived [Source:MGI Symbol;Acc:MGI:97357]
28. Nedd4 ENSMUSG00000032216 1749.94 18181.80 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
29. Npm1 ENSMUSG00000057113 1749.94 18181.80 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
30. Npr3 ENSMUSG00000022206 1749.94 18181.80 natriuretic peptide receptor 3 [Source:MGI Symbol;Acc:MGI:97373]
31. Pnrc1 ENSMUSG00000040128 1749.94 18181.80 proline-rich nuclear receptor coactivator 1 [Source:MGI Symbol;Acc:MGI:1917838]
32. Ptma ENSMUSG00000026238 1749.94 18181.80 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
33. Rbm8a ENSMUSG00000038374 1749.94 18181.80 RNA binding motif protein 8a [Source:MGI Symbol;Acc:MGI:1913129]
34. Rbp1 ENSMUSG00000046402 1749.94 18181.80 retinol binding protein 1, cellular [Source:MGI Symbol;Acc:MGI:97876]
35. Rpsa ENSMUSG00000032518 1749.94 18181.80 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
36. Tuba1b ENSMUSG00000023004 1749.94 18181.80 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
37. Txn1 ENSMUSG00000028367 1749.94 18181.80 thioredoxin 1 [Source:MGI Symbol;Acc:MGI:98874]
38. Vamp4 ENSMUSG00000026696 1749.94 18181.80 vesicle-associated membrane protein 4 [Source:MGI Symbol;Acc:MGI:1858730]
39. Wipi1 ENSMUSG00000041895 1749.94 18181.80 WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
40. Wsb1 ENSMUSG00000017677 1749.94 18181.80 WD repeat and SOCS box-containing 1 [Source:MGI Symbol;Acc:MGI:1926139]
41. mt-Co2 ENSMUSG00000064354 1749.94 18181.80 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
42. mt-Cytb ENSMUSG00000064370 1749.94 18181.80 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
43. mt-Nd1 ENSMUSG00000064341 1749.94 18181.80 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
44. mt-Nd4 ENSMUSG00000064363 1749.94 18181.80 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
45. mt-Nd5 ENSMUSG00000064367 1749.94 18181.80 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
46. 0610007N19Rik 0610007N19Rik 0.00 0.00
47. 0610007P14Rik 0.00 0.00 RIKEN cDNA 0610007P14 gene, transcript variant X1
48. 0610009B14Rik 0610009B14Rik 0.00 0.00
49. 0610009B22Rik ENSMUSG00000007777 0.00 0.00 RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
50. 0610009D07Rik 0610009D07Rik 0.00 0.00
51. 0610009E02Rik ENSMUSG00000086714 0.00 0.00 RIKEN cDNA 0610009E02 gene [Source:MGI Symbol;Acc:MGI:3698435]
52. 0610009L18Rik ENSMUSG00000043644 0.00 0.00 RIKEN cDNA 0610009L18 gene [Source:MGI Symbol;Acc:MGI:1914088]
53. 0610009O20Rik 0.00 0.00 RIKEN cDNA 0610009O20 gene
54. 0610010F05Rik ENSMUSG00000042208 0.00 0.00 RIKEN cDNA 0610010F05 gene [Source:MGI Symbol;Acc:MGI:1918925]
55. 0610010K14Rik ENSMUSG00000020831 0.00 0.00 RIKEN cDNA 0610010K14 gene [Source:MGI Symbol;Acc:MGI:1915609]
56. 0610011F06Rik 0.00 0.00 RIKEN cDNA 0610011F06 gene
57. 0610012D04Rik ENSMUSG00000089755 0.00 0.00 RIKEN cDNA 0610012D04 gene [Source:MGI Symbol;Acc:MGI:1918926]
58. 0610012G03Rik ENSMUSG00000107002 0.00 0.00 RIKEN cDNA 0610012G03 gene [Source:MGI Symbol;Acc:MGI:1913301]
59. 0610012H03Rik 0610012H03Rik 0.00 0.00
60. 0610025J13Rik ENSMUSG00000046683 0.00 0.00 RIKEN cDNA 0610025J13 gene [Source:MGI Symbol;Acc:MGI:1915618]
61. 0610030E20Rik ENSMUSG00000058706, ENSMUSG00000108680 0.00 0.00 RIKEN cDNA 0610030E20 gene [Source:MGI Symbol;Acc:MGI:1915614]
62. 0610031J06Rik 0610031J06Rik 0.00 0.00
63. 0610037L13Rik ENSMUSG00000028608 0.00 0.00 RIKEN cDNA 0610037L13 gene [Source:MGI Symbol;Acc:MGI:1921348]
64. 0610039K10Rik ENSMUSG00000058812 0.00 0.00 RIKEN cDNA 0610039K10 gene [Source:MGI Symbol;Acc:MGI:1915636]
65. 0610040B09Rik 0610040B09Rik 0.00 0.00
66. 0610040B10Rik ENSMUSG00000089889 0.00 0.00 RIKEN cDNA 0610040B10 gene [Source:MGI Symbol;Acc:MGI:1914922]
67. 0610040F04Rik ENSMUSG00000087341 0.00 0.00 RIKEN cDNA 0610040F04 gene [Source:MGI Symbol;Acc:MGI:1922644]
68. 0610040J01Rik ENSMUSG00000060512 0.00 0.00 RIKEN cDNA 0610040J01 gene [Source:MGI Symbol;Acc:MGI:1923511]
69. 0610043K17Rik ENSMUSG00000087361 0.00 0.00 RIKEN cDNA 0610043K17 gene [Source:MGI Symbol;Acc:MGI:1915650]
70. 1010001B22Rik ENSMUSG00000097863 0.00 0.00 RIKEN cDNA 1010001B22 gene [Source:MGI Symbol;Acc:MGI:1922653]
71. 1010001N08Rik ENSMUSG00000097222 0.00 0.00 RIKEN cDNA 1010001N08 gene [Source:MGI Symbol;Acc:MGI:1915684]
72. 1100001G20Rik 1100001G20Rik 0.00 0.00
73. 1110001A16Rik 1110001A16Rik 0.00 0.00
74. 1110001J03Rik 0.00 0.00 RIKEN cDNA 1110001J03 gene
75. 1110002E22Rik ENSMUSG00000090066 0.00 0.00 RIKEN cDNA 1110002E22 gene [Source:MGI Symbol;Acc:MGI:1915066]
76. 1110002J07Rik ENSMUSG00000097134 0.00 0.00 RIKEN cDNA 1110002J07 gene [Source:MGI Symbol;Acc:MGI:1915738]
77. 1110002L01Rik ENSMUSG00000071456 0.00 0.00 RIKEN cDNA 1110002L01 gene [Source:MGI Symbol;Acc:MGI:1915821]
78. 1110004E09Rik 0.00 0.00 RIKEN cDNA 1110004E09 gene
79. 1110004F10Rik ENSMUSG00000030663 0.00 0.00 RIKEN cDNA 1110004F10 gene [Source:MGI Symbol;Acc:MGI:1929274]
80. 1110006G14Rik 1110006G14Rik 0.00 0.00
81. 1110007C09Rik 1110007C09Rik 0.00 0.00
82. 1110008F13Rik 0.00 0.00 RIKEN cDNA 1110008F13 gene
83. 1110008J03Rik 1110008J03Rik 0.00 0.00
84. 1110008L16Rik ENSMUSG00000021023 0.00 0.00 RIKEN cDNA 1110008L16 gene [Source:MGI Symbol;Acc:MGI:1913382]
85. 1110008P14Rik ENSMUSG00000039195 0.00 0.00 RIKEN cDNA 1110008P14 gene [Source:MGI Symbol;Acc:MGI:1920987]
86. 1110012L19Rik ENSMUSG00000045237 0.00 0.00 RIKEN cDNA 1110012L19 gene [Source:MGI Symbol;Acc:MGI:1915868]
87. 1110017D15Rik ENSMUSG00000028441 0.00 0.00 RIKEN cDNA 1110017D15 gene [Source:MGI Symbol;Acc:MGI:1920971]
88. 1110018N20Rik ENSMUSG00000085151 0.00 0.00 RIKEN cDNA 1110018N20 gene [Source:MGI Symbol;Acc:MGI:1915753]
89. 1110019D14Rik ENSMUSG00000097616 0.00 0.00 RIKEN cDNA 1110019D14 gene [Source:MGI Symbol;Acc:MGI:1923561]
90. 1110020A21Rik ENSMUSG00000097047 0.00 0.00 RIKEN cDNA 1110020A21 gene [Source:MGI Symbol;Acc:MGI:1915781]
91. 1110028F11Rik ENSMUSG00000085972 0.00 0.00 RIKEN cDNA 1110028F11 gene [Source:MGI Symbol;Acc:MGI:1915940]
92. 1110032A03Rik ENSMUSG00000037971 0.00 0.00 RIKEN cDNA 1110032A03 gene [Source:MGI Symbol;Acc:MGI:1915971]
93. 1110032F04Rik ENSMUSG00000046999 0.00 0.00 RIKEN cDNA 1110032F04 gene [Source:MGI Symbol;Acc:MGI:1915975]
94. 1110034G24Rik 0.00 0.00 RIKEN cDNA 1110034G24 gene, transcript variant X6
95. 1110035M17Rik 1110035M17Rik 0.00 0.00
96. 1110037F02Rik 0.00 0.00 RIKEN cDNA 1110037F02 gene, transcript variant X1
97. 1110038B12Rik ENSMUSG00000092203 0.00 0.00 RIKEN cDNA 1110038B12 gene [Source:MGI Symbol;Acc:MGI:1916013]
98. 1110038F14Rik ENSMUSG00000063236 0.00 0.00 RIKEN cDNA 1110038F14 gene [Source:MGI Symbol;Acc:MGI:2152337]
99. 1110046J04Rik ENSMUSG00000085457 0.00 0.00 RIKEN cDNA 1110046J04 gene [Source:MGI Symbol;Acc:MGI:1916058]
100. 1110051M20Rik ENSMUSG00000040591 0.00 0.00 RIKEN cDNA 1110051M20 gene [Source:MGI Symbol;Acc:MGI:1915079]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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