Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_1, section s74.

Sample reads: 96,248. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Atp6 ENSMUSG00000064357 3796.72 39447.31 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
2. mt-Co1 ENSMUSG00000064351 3796.72 39447.31 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
3. mt-Rnr2 ENSMUSG00000064339 3796.72 39447.31 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
4. mt-Nd3 ENSMUSG00000064360 3037.38 31557.89 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
5. mt-Co2 ENSMUSG00000064354 2657.71 27613.18 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Cytb ENSMUSG00000064370 2467.87 25640.78 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
7. mt-Nd2 ENSMUSG00000064345 2088.20 21696.06 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
8. Ptma ENSMUSG00000026238 1898.36 19723.66 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
9. mt-Nd4 ENSMUSG00000064363 1898.36 19723.66 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
10. mt-Nd1 ENSMUSG00000064341 1518.69 15778.95 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
11. Eef1a1 ENSMUSG00000037742 1328.85 13806.54 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
12. mt-Co3 ENSMUSG00000064358 1139.02 11834.24 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
13. Actb ENSMUSG00000029580 949.18 9861.83 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. mt-Nd5 ENSMUSG00000064367 949.18 9861.83 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
15. mt-Rnr1 ENSMUSG00000064337 949.18 9861.83 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
16. H19 ENSMUSG00000000031 759.34 7889.42 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
17. Mdk ENSMUSG00000027239 759.34 7889.42 midkine [Source:MGI Symbol;Acc:MGI:96949]
18. Ddx39b ENSMUSG00000019432 569.51 5917.12 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
19. Gm10800 ENSMUSG00000075014 569.51 5917.12 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
20. Gm17132 ENSMUSG00000061331 569.51 5917.12 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
21. Gm26924 Gm26924 569.51 5917.12
22. Hbb-y ENSMUSG00000052187 569.51 5917.12 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
23. Hsp90ab1 ENSMUSG00000023944 569.51 5917.12 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
24. Peg3 ENSMUSG00000002265 569.51 5917.12 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
25. Actn1 ENSMUSG00000015143 379.67 3944.71 actinin, alpha 1 [Source:MGI Symbol;Acc:MGI:2137706]
26. Adam15 ENSMUSG00000028041 379.67 3944.71 a disintegrin and metallopeptidase domain 15 (metargidin) [Source:MGI Symbol;Acc:MGI:1333882]
27. Cdv3 ENSMUSG00000032803 379.67 3944.71 carnitine deficiency-associated gene expressed in ventricle 3 [Source:MGI Symbol;Acc:MGI:2448759]
28. Clp1 ENSMUSG00000027079 379.67 3944.71 CLP1, cleavage and polyadenylation factor I subunit [Source:MGI Symbol;Acc:MGI:2138968]
29. Fsd1 ENSMUSG00000011589 379.67 3944.71 fibronectin type 3 and SPRY domain-containing protein [Source:MGI Symbol;Acc:MGI:1934858]
30. Gm26870 ENSMUSG00000097312 379.67 3944.71 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
31. Gpc3 ENSMUSG00000055653 379.67 3944.71 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
32. H1f0 ENSMUSG00000096210 379.67 3944.71 H1 histone family, member 0 [Source:MGI Symbol;Acc:MGI:95893]
33. Hmgn1 ENSMUSG00000040681 379.67 3944.71 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
34. Hnrnpa0 ENSMUSG00000007836 379.67 3944.71 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
35. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 379.67 3944.71 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
36. Hsph1 ENSMUSG00000029657 379.67 3944.71 heat shock 105kDa/110kDa protein 1 [Source:MGI Symbol;Acc:MGI:105053]
37. Immp1l ENSMUSG00000042670 379.67 3944.71 IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913791]
38. Kdm4b ENSMUSG00000024201 379.67 3944.71 lysine (K)-specific demethylase 4B [Source:MGI Symbol;Acc:MGI:2442355]
39. Mar-05 Mar-05 379.67 3944.71
40. Mtch1 ENSMUSG00000024012 379.67 3944.71 mitochondrial carrier 1 [Source:MGI Symbol;Acc:MGI:1929261]
41. Pcbp1 ENSMUSG00000051695 379.67 3944.71 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
42. Pno1 ENSMUSG00000020116 379.67 3944.71 partner of NOB1 homolog [Source:MGI Symbol;Acc:MGI:1913499]
43. Rps6ka6 ENSMUSG00000025665, ENSMUSG00000116203 379.67 3944.71 ribosomal protein S6 kinase polypeptide 6 [Source:MGI Symbol;Acc:MGI:1914321]
44. Rps9 ENSMUSG00000006333 379.67 3944.71 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
45. Tubb5 ENSMUSG00000001525 379.67 3944.71 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
46. Ubb ENSMUSG00000019505 379.67 3944.71 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
47. Unc119b ENSMUSG00000046562 379.67 3944.71 unc-119 lipid binding chaperone B [Source:MGI Symbol;Acc:MGI:2147162]
48. Wbp5 379.67 3944.71 WW domain binding protein 5
49. 1110001J03Rik 189.84 1972.41 RIKEN cDNA 1110001J03 gene
50. 2010003O02Rik 2010003O02Rik 189.84 1972.41
51. 2310061I04Rik ENSMUSG00000050705 189.84 1972.41 RIKEN cDNA 2310061I04 gene [Source:MGI Symbol;Acc:MGI:1916912]
52. 5830418K08Rik 5830418K08Rik 189.84 1972.41
53. AI846148 189.84 1972.41 expressed sequence AI846148, transcript variant X2
54. AW549877 ENSMUSG00000041935 189.84 1972.41 expressed sequence AW549877 [Source:MGI Symbol;Acc:MGI:2146232]
55. Aasdhppt ENSMUSG00000025894 189.84 1972.41 aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:MGI Symbol;Acc:MGI:1914868]
56. Acin1 ENSMUSG00000022185 189.84 1972.41 apoptotic chromatin condensation inducer 1 [Source:MGI Symbol;Acc:MGI:1891824]
57. Actc1 ENSMUSG00000068614 189.84 1972.41 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
58. Actn4 ENSMUSG00000054808 189.84 1972.41 actinin alpha 4 [Source:MGI Symbol;Acc:MGI:1890773]
59. Arhgef6 ENSMUSG00000031133 189.84 1972.41 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:MGI Symbol;Acc:MGI:1920591]
60. Atf7ip ENSMUSG00000030213 189.84 1972.41 activating transcription factor 7 interacting protein [Source:MGI Symbol;Acc:MGI:1858965]
61. Atp5g3 ENSMUSG00000018770 189.84 1972.41 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
62. Atp5h ENSMUSG00000034566 189.84 1972.41 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D [Source:MGI Symbol;Acc:MGI:1918929]
63. Basp1 ENSMUSG00000045763 189.84 1972.41 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
64. Bcl7a ENSMUSG00000029438 189.84 1972.41 B cell CLL/lymphoma 7A [Source:MGI Symbol;Acc:MGI:1924295]
65. Bmpr1a ENSMUSG00000021796 189.84 1972.41 bone morphogenetic protein receptor, type 1A [Source:MGI Symbol;Acc:MGI:1338938]
66. Bod1l ENSMUSG00000061755 189.84 1972.41 biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804]
67. Bub1 ENSMUSG00000027379 189.84 1972.41 BUB1, mitotic checkpoint serine/threonine kinase [Source:MGI Symbol;Acc:MGI:1100510]
68. Calm1 ENSMUSG00000001175 189.84 1972.41 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
69. Capns1 ENSMUSG00000001794 189.84 1972.41 calpain, small subunit 1 [Source:MGI Symbol;Acc:MGI:88266]
70. Ccdc166 ENSMUSG00000098176 189.84 1972.41 coiled-coil domain containing 166 [Source:MGI Symbol;Acc:MGI:1925902]
71. Ccdc174 ENSMUSG00000034083 189.84 1972.41 coiled-coil domain containing 174 [Source:MGI Symbol;Acc:MGI:2444652]
72. Ccdc23 Ccdc23 189.84 1972.41
73. Ccnd2 ENSMUSG00000000184 189.84 1972.41 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
74. Cct6a ENSMUSG00000029447 189.84 1972.41 chaperonin containing Tcp1, subunit 6a (zeta) [Source:MGI Symbol;Acc:MGI:107943]
75. Cd151 ENSMUSG00000025510 189.84 1972.41 CD151 antigen [Source:MGI Symbol;Acc:MGI:1096360]
76. Cdca3 ENSMUSG00000023505 189.84 1972.41 cell division cycle associated 3 [Source:MGI Symbol;Acc:MGI:1315198]
77. Cdk2ap1 ENSMUSG00000029394 189.84 1972.41 CDK2 (cyclin-dependent kinase 2)-associated protein 1 [Source:MGI Symbol;Acc:MGI:1202069]
78. Cenpl ENSMUSG00000026708 189.84 1972.41 centromere protein L [Source:MGI Symbol;Acc:MGI:1917704]
79. Cenpm ENSMUSG00000068101 189.84 1972.41 centromere protein M [Source:MGI Symbol;Acc:MGI:1913820]
80. Cep68 ENSMUSG00000044066 189.84 1972.41 centrosomal protein 68 [Source:MGI Symbol;Acc:MGI:2667663]
81. Cfl1 ENSMUSG00000056201 189.84 1972.41 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
82. Chsy1 ENSMUSG00000032640 189.84 1972.41 chondroitin sulfate synthase 1 [Source:MGI Symbol;Acc:MGI:2681120]
83. Chuk ENSMUSG00000025199 189.84 1972.41 conserved helix-loop-helix ubiquitous kinase [Source:MGI Symbol;Acc:MGI:99484]
84. Cirh1a 189.84 1972.41 cirrhosis, autosomal recessive 1A (human), transcript variant X1
85. Cltc ENSMUSG00000047126 189.84 1972.41 clathrin, heavy polypeptide (Hc) [Source:MGI Symbol;Acc:MGI:2388633]
86. Cnot11 ENSMUSG00000003135 189.84 1972.41 CCR4-NOT transcription complex, subunit 11 [Source:MGI Symbol;Acc:MGI:106580]
87. Cnot2 ENSMUSG00000020166 189.84 1972.41 CCR4-NOT transcription complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1919318]
88. Copa ENSMUSG00000026553 189.84 1972.41 coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]
89. Cox6b1 ENSMUSG00000036751 189.84 1972.41 cytochrome c oxidase, subunit 6B1 [Source:MGI Symbol;Acc:MGI:107460]
90. Cox8a ENSMUSG00000035885 189.84 1972.41 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
91. Crabp2 ENSMUSG00000004885 189.84 1972.41 cellular retinoic acid binding protein II [Source:MGI Symbol;Acc:MGI:88491]
92. Crmp1 ENSMUSG00000029121 189.84 1972.41 collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
93. Ctsl ENSMUSG00000021477 189.84 1972.41 cathepsin L [Source:MGI Symbol;Acc:MGI:88564]
94. Cwc27 ENSMUSG00000021715 189.84 1972.41 CWC27 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1914535]
95. Ddx46 ENSMUSG00000021500 189.84 1972.41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:MGI Symbol;Acc:MGI:1920895]
96. Ddx5 ENSMUSG00000020719 189.84 1972.41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
97. Dhx15 ENSMUSG00000029169 189.84 1972.41 DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Source:MGI Symbol;Acc:MGI:1099786]
98. Dpep1 ENSMUSG00000019278 189.84 1972.41 dipeptidase 1 (renal) [Source:MGI Symbol;Acc:MGI:94917]
99. Dpp3 ENSMUSG00000063904 189.84 1972.41 dipeptidylpeptidase 3 [Source:MGI Symbol;Acc:MGI:1922471]
100. Dqx1 ENSMUSG00000009145 189.84 1972.41 DEAQ RNA-dependent ATPase [Source:MGI Symbol;Acc:MGI:2136388]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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