Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_1, section s70.

Sample reads: 96,247. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 6367.04 66153.02 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Atp6 ENSMUSG00000064357 4099.33 42591.70 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Nd1 ENSMUSG00000064341 3314.35 34435.82 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
4. mt-Cytb ENSMUSG00000064370 3270.74 33982.72 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
5. mt-Co2 ENSMUSG00000064354 3052.69 31717.20 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Co1 ENSMUSG00000064351 2572.98 26733.05 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
7. mt-Nd2 ENSMUSG00000064345 2006.05 20842.70 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
8. mt-Nd4 ENSMUSG00000064363 1831.61 19030.28 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
9. mt-Nd3 ENSMUSG00000064360 1744.39 18124.07 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. mt-Nd5 ENSMUSG00000064367 1526.34 15858.55 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
11. mt-Rnr1 ENSMUSG00000064337 1439.12 14952.34 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
12. Ptma ENSMUSG00000026238 1003.03 10421.40 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
13. mt-Co3 ENSMUSG00000064358 1003.03 10421.40 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
14. Actb ENSMUSG00000029580 610.54 6343.46 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
15. Eef1a1 ENSMUSG00000037742 523.32 5437.25 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Gm13340 ENSMUSG00000083563 479.71 4984.15 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
17. Mdk ENSMUSG00000027239 479.71 4984.15 midkine [Source:MGI Symbol;Acc:MGI:96949]
18. Hnrnpc ENSMUSG00000060373 392.49 4077.94 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
19. Cfl1 ENSMUSG00000056201 305.27 3171.73 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
20. H19 ENSMUSG00000000031 305.27 3171.73 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
21. Rps20 ENSMUSG00000028234 305.27 3171.73 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
22. Rpl23 ENSMUSG00000071415 261.66 2718.63 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
23. Rpsa ENSMUSG00000032518 261.66 2718.63 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
24. Gm10800 ENSMUSG00000075014 218.05 2265.52 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
25. Hmga2 ENSMUSG00000056758 218.05 2265.52 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
26. Hnrnpa2b1 ENSMUSG00000004980 218.05 2265.52 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
27. Hspa5 ENSMUSG00000026864 218.05 2265.52 heat shock protein 5 [Source:MGI Symbol;Acc:MGI:95835]
28. Malat1 ENSMUSG00000092341 218.05 2265.52 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
29. Pabpc1 ENSMUSG00000022283 218.05 2265.52 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
30. Prrc2c ENSMUSG00000040225 218.05 2265.52 proline-rich coiled-coil 2C [Source:MGI Symbol;Acc:MGI:1913754]
31. Qk ENSMUSG00000062078 218.05 2265.52 quaking [Source:MGI Symbol;Acc:MGI:97837]
32. Rpl4 ENSMUSG00000032399 218.05 2265.52 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
33. Calm1 ENSMUSG00000001175 174.44 1812.42 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
34. Cenpe ENSMUSG00000045328 174.44 1812.42 centromere protein E [Source:MGI Symbol;Acc:MGI:1098230]
35. Chchd2 ENSMUSG00000070493 174.44 1812.42 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
36. Ctnnbip1 ENSMUSG00000028988 174.44 1812.42 catenin beta interacting protein 1 [Source:MGI Symbol;Acc:MGI:1915756]
37. Dlk1 ENSMUSG00000040856, ENSMUSG00000098411 174.44 1812.42 delta like non-canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:94900]
38. Eif4g1 ENSMUSG00000045983 174.44 1812.42 eukaryotic translation initiation factor 4, gamma 1 [Source:MGI Symbol;Acc:MGI:2384784]
39. Eif5a ENSMUSG00000078812 174.44 1812.42 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
40. Gm10076 ENSMUSG00000060143 174.44 1812.42 predicted gene 10076 [Source:MGI Symbol;Acc:MGI:3704451]
41. Gm17132 ENSMUSG00000061331 174.44 1812.42 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
42. Gm8292 ENSMUSG00000100215 174.44 1812.42 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
43. Igf2 ENSMUSG00000048583 174.44 1812.42 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
44. Lamp1 ENSMUSG00000031447 174.44 1812.42 lysosomal-associated membrane protein 1 [Source:MGI Symbol;Acc:MGI:96745]
45. Lgals1 ENSMUSG00000068220 174.44 1812.42 lectin, galactose binding, soluble 1 [Source:MGI Symbol;Acc:MGI:96777]
46. Mapre1 ENSMUSG00000027479 174.44 1812.42 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
47. Nsd1 ENSMUSG00000021488 174.44 1812.42 nuclear receptor-binding SET-domain protein 1 [Source:MGI Symbol;Acc:MGI:1276545]
48. Rbm39 ENSMUSG00000027620 174.44 1812.42 RNA binding motif protein 39 [Source:MGI Symbol;Acc:MGI:2157953]
49. Set ENSMUSG00000054766 174.44 1812.42 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
50. Ubb ENSMUSG00000019505 174.44 1812.42 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
51. Wt1 ENSMUSG00000016458 174.44 1812.42 Wilms tumor 1 homolog [Source:MGI Symbol;Acc:MGI:98968]
52. Azin1 ENSMUSG00000037458 130.83 1359.31 antizyme inhibitor 1 [Source:MGI Symbol;Acc:MGI:1859169]
53. Bop1 ENSMUSG00000022557 130.83 1359.31 block of proliferation 1 [Source:MGI Symbol;Acc:MGI:1334460]
54. Ccdc12 ENSMUSG00000019659 130.83 1359.31 coiled-coil domain containing 12 [Source:MGI Symbol;Acc:MGI:1919904]
55. Cdkn1c ENSMUSG00000037664 130.83 1359.31 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
56. Cox4i1 ENSMUSG00000031818 130.83 1359.31 cytochrome c oxidase subunit 4I1 [Source:MGI Symbol;Acc:MGI:88473]
57. Cox8a ENSMUSG00000035885 130.83 1359.31 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
58. Dek ENSMUSG00000021377 130.83 1359.31 DEK oncogene (DNA binding) [Source:MGI Symbol;Acc:MGI:1926209]
59. Eef1b2 ENSMUSG00000025967 130.83 1359.31 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
60. Eif3l ENSMUSG00000033047 130.83 1359.31 eukaryotic translation initiation factor 3, subunit L [Source:MGI Symbol;Acc:MGI:2386251]
61. Emc6 ENSMUSG00000047260 130.83 1359.31 ER membrane protein complex subunit 6 [Source:MGI Symbol;Acc:MGI:1913298]
62. Flna ENSMUSG00000031328 130.83 1359.31 filamin, alpha [Source:MGI Symbol;Acc:MGI:95556]
63. Foxp1 ENSMUSG00000030067 130.83 1359.31 forkhead box P1 [Source:MGI Symbol;Acc:MGI:1914004]
64. Gm15459 ENSMUSG00000100801 130.83 1359.31 predicted gene 15459 [Source:MGI Symbol;Acc:MGI:3705702]
65. Gm26870 ENSMUSG00000097312 130.83 1359.31 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
66. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 130.83 1359.31 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
67. Lrrc17 ENSMUSG00000039883 130.83 1359.31 leucine rich repeat containing 17 [Source:MGI Symbol;Acc:MGI:1921761]
68. Mta1 ENSMUSG00000021144 130.83 1359.31 metastasis associated 1 [Source:MGI Symbol;Acc:MGI:2150037]
69. Ncl ENSMUSG00000026234 130.83 1359.31 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
70. Ndufc2 ENSMUSG00000030647 130.83 1359.31 NADH:ubiquinone oxidoreductase subunit C2 [Source:MGI Symbol;Acc:MGI:1344370]
71. Nedd4 ENSMUSG00000032216 130.83 1359.31 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
72. Npm1 ENSMUSG00000057113 130.83 1359.31 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
73. Paics ENSMUSG00000029247 130.83 1359.31 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
74. Pbrm1 ENSMUSG00000042323 130.83 1359.31 polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
75. Pcbp1 ENSMUSG00000051695 130.83 1359.31 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
76. Peg3 ENSMUSG00000002265 130.83 1359.31 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
77. Plagl1 ENSMUSG00000019817 130.83 1359.31 pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
78. Polr1c ENSMUSG00000067148 130.83 1359.31 polymerase (RNA) I polypeptide C [Source:MGI Symbol;Acc:MGI:103288]
79. Psmb1 ENSMUSG00000014769 130.83 1359.31 proteasome (prosome, macropain) subunit, beta type 1 [Source:MGI Symbol;Acc:MGI:104884]
80. Rcc2 ENSMUSG00000040945 130.83 1359.31 regulator of chromosome condensation 2 [Source:MGI Symbol;Acc:MGI:1919784]
81. Rif1 ENSMUSG00000036202 130.83 1359.31 replication timing regulatory factor 1 [Source:MGI Symbol;Acc:MGI:1098622]
82. Rpl18a ENSMUSG00000045128 130.83 1359.31 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
83. Rpl26 ENSMUSG00000060938 130.83 1359.31 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
84. Rps11 ENSMUSG00000003429 130.83 1359.31 ribosomal protein S11 [Source:MGI Symbol;Acc:MGI:1351329]
85. Rps24 ENSMUSG00000025290 130.83 1359.31 ribosomal protein S24 [Source:MGI Symbol;Acc:MGI:98147]
86. Rps26 ENSMUSG00000025362 130.83 1359.31 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
87. Rps3 ENSMUSG00000030744 130.83 1359.31 ribosomal protein S3 [Source:MGI Symbol;Acc:MGI:1350917]
88. Son ENSMUSG00000022961 130.83 1359.31 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
89. Sptan1 ENSMUSG00000057738 130.83 1359.31 spectrin alpha, non-erythrocytic 1 [Source:MGI Symbol;Acc:MGI:98386]
90. Srsf3 ENSMUSG00000071172 130.83 1359.31 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
91. Stam ENSMUSG00000026718 130.83 1359.31 signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:MGI Symbol;Acc:MGI:1329014]
92. Sub1 ENSMUSG00000022205 130.83 1359.31 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
93. Surf4 ENSMUSG00000014867 130.83 1359.31 surfeit gene 4 [Source:MGI Symbol;Acc:MGI:98445]
94. Tia1 ENSMUSG00000071337 130.83 1359.31 cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]
95. Tpt1 ENSMUSG00000060126 130.83 1359.31 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
96. Tuba1b ENSMUSG00000023004 130.83 1359.31 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
97. Tubb5 ENSMUSG00000001525 130.83 1359.31 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
98. Ugdh ENSMUSG00000029201 130.83 1359.31 UDP-glucose dehydrogenase [Source:MGI Symbol;Acc:MGI:1306785]
99. Ybx1 ENSMUSG00000028639 130.83 1359.31 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
100. Ywhaz ENSMUSG00000022285 130.83 1359.31 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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