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Experiment Mouse_E10_5_slice_1, section s65.

Sample reads: 96,249. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 3593.44 37334.93 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Atp6 ENSMUSG00000064357 2470.49 25667.76 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Cytb ENSMUSG00000064370 2470.49 25667.76 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. Ptma ENSMUSG00000026238 1980.47 20576.58 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
5. mt-Co2 ENSMUSG00000064354 1817.14 18879.62 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd1 ENSMUSG00000064341 1735.47 18031.09 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Rnr1 ENSMUSG00000064337 1204.62 12515.70 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
8. Actb ENSMUSG00000029580 1122.95 11667.16 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
9. mt-Nd3 ENSMUSG00000064360 1020.86 10606.48 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. mt-Nd4 ENSMUSG00000064363 1020.86 10606.48 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
11. mt-Co1 ENSMUSG00000064351 980.03 10182.26 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
12. Eef1a1 ENSMUSG00000037742 816.69 8485.20 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
13. mt-Nd2 ENSMUSG00000064345 775.86 8060.99 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
14. mt-Nd5 ENSMUSG00000064367 612.52 6363.93 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
15. Igf2 ENSMUSG00000048583 551.27 5727.55 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
16. Mdk ENSMUSG00000027239 551.27 5727.55 midkine [Source:MGI Symbol;Acc:MGI:96949]
17. Gm10800 ENSMUSG00000075014 510.43 5303.24 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
18. Npm1 ENSMUSG00000057113 469.60 4879.02 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
19. mt-Co3 ENSMUSG00000064358 387.93 4030.49 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
20. Cfl1 ENSMUSG00000056201 367.51 3818.34 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
21. H19 ENSMUSG00000000031 326.68 3394.12 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
22. Eif5a ENSMUSG00000078812 306.26 3181.96 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
23. Hmga2 ENSMUSG00000056758 285.84 2969.80 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
24. Rpl23 ENSMUSG00000071415 265.42 2757.65 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
25. Tmsb4x ENSMUSG00000049775 265.42 2757.65 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
26. 2810417H13Rik 224.59 2333.43 RIKEN cDNA 2810417H13 gene
27. Hsp90ab1 ENSMUSG00000023944 224.59 2333.43 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
28. Tuba1b ENSMUSG00000023004 224.59 2333.43 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
29. Chchd2 ENSMUSG00000070493 204.17 2121.27 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
30. Hnrnph1 ENSMUSG00000007850 204.17 2121.27 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
31. Rpsa ENSMUSG00000032518 204.17 2121.27 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
32. Tubb5 ENSMUSG00000001525 204.17 2121.27 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
33. Hsp90aa1 ENSMUSG00000021270 183.76 1909.22 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
34. Ldha ENSMUSG00000063229 183.76 1909.22 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
35. Nedd4 ENSMUSG00000032216 183.76 1909.22 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
36. Txn1 ENSMUSG00000028367 183.76 1909.22 thioredoxin 1 [Source:MGI Symbol;Acc:MGI:98874]
37. Col3a1 ENSMUSG00000026043 163.34 1697.06 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
38. Eif4g2 ENSMUSG00000005610 163.34 1697.06 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
39. Gm17132 ENSMUSG00000061331 163.34 1697.06 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
40. Hnrnpc ENSMUSG00000060373 163.34 1697.06 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
41. Rpl32 ENSMUSG00000057841 163.34 1697.06 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
42. Rps3a1 ENSMUSG00000028081 163.34 1697.06 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
43. Ywhae ENSMUSG00000020849 163.34 1697.06 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
44. Ywhaz ENSMUSG00000022285 163.34 1697.06 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
45. Banf1 ENSMUSG00000024844 142.92 1484.90 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
46. Eef1g ENSMUSG00000071644 142.92 1484.90 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
47. Eif5b ENSMUSG00000026083 142.92 1484.90 eukaryotic translation initiation factor 5B [Source:MGI Symbol;Acc:MGI:2441772]
48. Fubp1 ENSMUSG00000028034 142.92 1484.90 far upstream element (FUSE) binding protein 1 [Source:MGI Symbol;Acc:MGI:1196294]
49. Gm5805 ENSMUSG00000061848 142.92 1484.90 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
50. H3f3b ENSMUSG00000016559 142.92 1484.90 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
51. Meg3 ENSMUSG00000021268 142.92 1484.90 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
52. Nasp ENSMUSG00000028693 142.92 1484.90 nuclear autoantigenic sperm protein (histone-binding) [Source:MGI Symbol;Acc:MGI:1355328]
53. Ran ENSMUSG00000029430 142.92 1484.90 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
54. Rpl4 ENSMUSG00000032399 142.92 1484.90 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
55. Rplp1 ENSMUSG00000007892 142.92 1484.90 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
56. Rps20 ENSMUSG00000028234 142.92 1484.90 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
57. Sfrs18 Sfrs18 142.92 1484.90
58. Tpt1 ENSMUSG00000060126 142.92 1484.90 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
59. Twist1 ENSMUSG00000035799 142.92 1484.90 twist basic helix-loop-helix transcription factor 1 [Source:MGI Symbol;Acc:MGI:98872]
60. Wbp5 142.92 1484.90 WW domain binding protein 5
61. Ybx1 ENSMUSG00000028639 142.92 1484.90 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
62. Arid1a ENSMUSG00000007880 122.50 1272.74 AT rich interactive domain 1A (SWI-like) [Source:MGI Symbol;Acc:MGI:1935147]
63. Col1a1 ENSMUSG00000001506 122.50 1272.74 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
64. Ddx5 ENSMUSG00000020719 122.50 1272.74 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
65. Elavl1 ENSMUSG00000040028 122.50 1272.74 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Source:MGI Symbol;Acc:MGI:1100851]
66. Gm26870 ENSMUSG00000097312 122.50 1272.74 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
67. Hmgn1 ENSMUSG00000040681 122.50 1272.74 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
68. Hnrnpa2b1 ENSMUSG00000004980 122.50 1272.74 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
69. Kmt2e ENSMUSG00000029004 122.50 1272.74 lysine (K)-specific methyltransferase 2E [Source:MGI Symbol;Acc:MGI:1924825]
70. Kpnb1 ENSMUSG00000001440 122.50 1272.74 karyopherin (importin) beta 1 [Source:MGI Symbol;Acc:MGI:107532]
71. Mapre1 ENSMUSG00000027479 122.50 1272.74 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
72. Marcks ENSMUSG00000069662 122.50 1272.74 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
73. Pkm ENSMUSG00000032294 122.50 1272.74 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
74. Rpl26 ENSMUSG00000060938 122.50 1272.74 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
75. Rps4x ENSMUSG00000031320 122.50 1272.74 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
76. Trim28 ENSMUSG00000005566 122.50 1272.74 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
77. Tuba1a ENSMUSG00000072235 122.50 1272.74 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
78. Aldoa ENSMUSG00000030695, ENSMUSG00000114515 102.09 1060.69 aldolase A, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87994]
79. Arpc2 ENSMUSG00000006304 102.09 1060.69 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
80. Atp5g3 ENSMUSG00000018770 102.09 1060.69 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
81. Crabp1 ENSMUSG00000032291 102.09 1060.69 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
82. Eef1b2 ENSMUSG00000025967 102.09 1060.69 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
83. Fkbp4 ENSMUSG00000030357 102.09 1060.69 FK506 binding protein 4 [Source:MGI Symbol;Acc:MGI:95543]
84. Fscn1 ENSMUSG00000029581 102.09 1060.69 fascin actin-bundling protein 1 [Source:MGI Symbol;Acc:MGI:1352745]
85. Hmgb3 ENSMUSG00000015217 102.09 1060.69 high mobility group box 3 [Source:MGI Symbol;Acc:MGI:1098219]
86. Mmp2 ENSMUSG00000031740 102.09 1060.69 matrix metallopeptidase 2 [Source:MGI Symbol;Acc:MGI:97009]
87. Morf4l1 ENSMUSG00000062270 102.09 1060.69 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
88. Ncl ENSMUSG00000026234 102.09 1060.69 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
89. Ndufc2 ENSMUSG00000030647 102.09 1060.69 NADH:ubiquinone oxidoreductase subunit C2 [Source:MGI Symbol;Acc:MGI:1344370]
90. Pcbp1 ENSMUSG00000051695 102.09 1060.69 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
91. Peg3 ENSMUSG00000002265 102.09 1060.69 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
92. Psip1 ENSMUSG00000028484 102.09 1060.69 PC4 and SFRS1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2142116]
93. Rpl39-ps ENSMUSG00000036305 102.09 1060.69 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
94. Rpl7 ENSMUSG00000043716 102.09 1060.69 ribosomal protein L7 [Source:MGI Symbol;Acc:MGI:98073]
95. Rps26 ENSMUSG00000025362 102.09 1060.69 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
96. Son ENSMUSG00000022961 102.09 1060.69 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
97. Srsf1 ENSMUSG00000018379, ENSMUSG00000098301 102.09 1060.69 serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]
98. Ubb ENSMUSG00000019505 102.09 1060.69 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
99. Adamts9 ENSMUSG00000030022 81.67 848.53 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9 [Source:MGI Symbol;Acc:MGI:1916320]
100. Arf4 ENSMUSG00000021877, ENSMUSG00000115861 81.67 848.53 ADP-ribosylation factor 4 [Source:MGI Symbol;Acc:MGI:99433]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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