Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_1, section s64.

Sample reads: 96,245. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 4122.84 42837.02 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Cytb ENSMUSG00000064370 2807.79 29173.43 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 2203.59 22895.68 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. Ptma ENSMUSG00000026238 1883.71 19572.07 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
5. mt-Co2 ENSMUSG00000064354 1492.75 15509.93 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd3 ENSMUSG00000064360 1457.21 15140.67 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
7. mt-Nd1 ENSMUSG00000064341 1386.13 14402.13 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
8. mt-Co1 ENSMUSG00000064351 1350.58 14032.76 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Nd4 ENSMUSG00000064363 1137.33 11817.06 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
10. Actb ENSMUSG00000029580 924.08 9601.35 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
11. mt-Nd2 ENSMUSG00000064345 853.00 8862.82 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. mt-Rnr1 ENSMUSG00000064337 853.00 8862.82 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
13. mt-Nd5 ENSMUSG00000064367 746.38 7755.02 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
14. Eef1a1 ENSMUSG00000037742 639.75 6647.11 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. Gm10800 ENSMUSG00000075014 639.75 6647.11 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
16. Igf2 ENSMUSG00000048583 568.67 5908.58 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. Hsp90ab1 ENSMUSG00000023944 533.13 5539.31 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
18. Gm26924 Gm26924 462.04 4800.68
19. Mdk ENSMUSG00000027239 462.04 4800.68 midkine [Source:MGI Symbol;Acc:MGI:96949]
20. H19 ENSMUSG00000000031 390.96 4062.14 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
21. Rpl23 ENSMUSG00000071415 390.96 4062.14 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
22. Tuba1b ENSMUSG00000023004 390.96 4062.14 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
23. mt-Co3 ENSMUSG00000064358 390.96 4062.14 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
24. Cfl1 ENSMUSG00000056201 319.88 3323.61 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
25. Hmga2 ENSMUSG00000056758 284.33 2954.24 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
26. Pkm ENSMUSG00000032294 284.33 2954.24 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
27. Chchd2 ENSMUSG00000070493 248.79 2584.97 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
28. Hnrnpa2b1 ENSMUSG00000004980 248.79 2584.97 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
29. Rps20 ENSMUSG00000028234 248.79 2584.97 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
30. Atp5g3 ENSMUSG00000018770 213.25 2215.70 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
31. Hmgn1 ENSMUSG00000040681 213.25 2215.70 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
32. Hnrnpc ENSMUSG00000060373 213.25 2215.70 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
33. Pabpc1 ENSMUSG00000022283 213.25 2215.70 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
34. Ran ENSMUSG00000029430 213.25 2215.70 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
35. Rbm25 ENSMUSG00000010608 213.25 2215.70 RNA binding motif protein 25 [Source:MGI Symbol;Acc:MGI:1914289]
36. Rpsa ENSMUSG00000032518 213.25 2215.70 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
37. Tpt1 ENSMUSG00000060126 213.25 2215.70 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
38. Ybx1 ENSMUSG00000028639 213.25 2215.70 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
39. 2810417H13Rik 177.71 1846.44 RIKEN cDNA 2810417H13 gene
40. Anp32b ENSMUSG00000028333 177.71 1846.44 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
41. Atp5c1 ENSMUSG00000025781 177.71 1846.44 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 [Source:MGI Symbol;Acc:MGI:1261437]
42. Fkbp1a ENSMUSG00000032966 177.71 1846.44 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
43. Flna ENSMUSG00000031328 177.71 1846.44 filamin, alpha [Source:MGI Symbol;Acc:MGI:95556]
44. Hsp90aa1 ENSMUSG00000021270 177.71 1846.44 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
45. Nedd4 ENSMUSG00000032216 177.71 1846.44 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
46. Npm1 ENSMUSG00000057113 177.71 1846.44 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
47. Rbms1 ENSMUSG00000026970 177.71 1846.44 RNA binding motif, single stranded interacting protein 1 [Source:MGI Symbol;Acc:MGI:1861774]
48. Rpl39-ps ENSMUSG00000036305 177.71 1846.44 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
49. Rps5 ENSMUSG00000012848 177.71 1846.44 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
50. Rrm2 ENSMUSG00000020649 177.71 1846.44 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
51. Set ENSMUSG00000054766 177.71 1846.44 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
52. Tubb5 ENSMUSG00000001525 177.71 1846.44 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
53. Zranb2 ENSMUSG00000028180 177.71 1846.44 zinc finger, RAN-binding domain containing 2 [Source:MGI Symbol;Acc:MGI:1858211]
54. Ccnd2 ENSMUSG00000000184 142.17 1477.17 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
55. Cox8a ENSMUSG00000035885 142.17 1477.17 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
56. Eef1b2 ENSMUSG00000025967 142.17 1477.17 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
57. Eif1 ENSMUSG00000035530 142.17 1477.17 eukaryotic translation initiation factor 1 [Source:MGI Symbol;Acc:MGI:105125]
58. Eif5a ENSMUSG00000078812 142.17 1477.17 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
59. Gm17131 ENSMUSG00000085328 142.17 1477.17 predicted gene 17131 [Source:MGI Symbol;Acc:MGI:4937958]
60. Ier3ip1 ENSMUSG00000090000 142.17 1477.17 immediate early response 3 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1913441]
61. Igfbp4 ENSMUSG00000017493 142.17 1477.17 insulin-like growth factor binding protein 4 [Source:MGI Symbol;Acc:MGI:96439]
62. Igfbp5 ENSMUSG00000026185 142.17 1477.17 insulin-like growth factor binding protein 5 [Source:MGI Symbol;Acc:MGI:96440]
63. Mad1l1 ENSMUSG00000029554 142.17 1477.17 MAD1 mitotic arrest deficient 1-like 1 [Source:MGI Symbol;Acc:MGI:1341857]
64. Pbx1 ENSMUSG00000052534 142.17 1477.17 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
65. Polr2m ENSMUSG00000032199 142.17 1477.17 polymerase (RNA) II (DNA directed) polypeptide M [Source:MGI Symbol;Acc:MGI:107282]
66. Rnf7 ENSMUSG00000051234 142.17 1477.17 ring finger protein 7 [Source:MGI Symbol;Acc:MGI:1337096]
67. Rpl18a ENSMUSG00000045128 142.17 1477.17 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
68. Rpl32 ENSMUSG00000057841 142.17 1477.17 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
69. Rpl7 ENSMUSG00000043716 142.17 1477.17 ribosomal protein L7 [Source:MGI Symbol;Acc:MGI:98073]
70. Rplp1 ENSMUSG00000007892 142.17 1477.17 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
71. Rps4x ENSMUSG00000031320 142.17 1477.17 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
72. Sfrp1 ENSMUSG00000031548 142.17 1477.17 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
73. Sh3bp5 ENSMUSG00000021892 142.17 1477.17 SH3-domain binding protein 5 (BTK-associated) [Source:MGI Symbol;Acc:MGI:1344391]
74. Syncrip ENSMUSG00000032423 142.17 1477.17 synaptotagmin binding, cytoplasmic RNA interacting protein [Source:MGI Symbol;Acc:MGI:1891690]
75. Tsc22d1 ENSMUSG00000022010 142.17 1477.17 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
76. Ubb ENSMUSG00000019505 142.17 1477.17 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
77. Ywhae ENSMUSG00000020849 142.17 1477.17 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
78. 2810474O19Rik 106.63 1107.90 RIKEN cDNA 2810474O19 gene, transcript variant X4
79. 3110082I17Rik ENSMUSG00000053553 106.63 1107.90 RIKEN cDNA 3110082I17 gene [Source:MGI Symbol;Acc:MGI:1920462]
80. Atp5a1 ENSMUSG00000025428, ENSMUSG00000116276 106.63 1107.90 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 [Source:MGI Symbol;Acc:MGI:88115]
81. Banf1 ENSMUSG00000024844 106.63 1107.90 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
82. Capns1 ENSMUSG00000001794 106.63 1107.90 calpain, small subunit 1 [Source:MGI Symbol;Acc:MGI:88266]
83. Ccna2 ENSMUSG00000027715 106.63 1107.90 cyclin A2 [Source:MGI Symbol;Acc:MGI:108069]
84. Cnn2 ENSMUSG00000004665 106.63 1107.90 calponin 2 [Source:MGI Symbol;Acc:MGI:105093]
85. Cnpy2 ENSMUSG00000025381 106.63 1107.90 canopy FGF signaling regulator 2 [Source:MGI Symbol;Acc:MGI:1928477]
86. Crabp1 ENSMUSG00000032291 106.63 1107.90 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
87. Csde1 ENSMUSG00000068823 106.63 1107.90 cold shock domain containing E1, RNA binding [Source:MGI Symbol;Acc:MGI:92356]
88. Csnk1d ENSMUSG00000025162 106.63 1107.90 casein kinase 1, delta [Source:MGI Symbol;Acc:MGI:1355272]
89. Dbn1 ENSMUSG00000034675 106.63 1107.90 drebrin 1 [Source:MGI Symbol;Acc:MGI:1931838]
90. Ddx1 ENSMUSG00000037149 106.63 1107.90 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Source:MGI Symbol;Acc:MGI:2144727]
91. Ddx5 ENSMUSG00000020719 106.63 1107.90 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
92. Dhx9 ENSMUSG00000042699 106.63 1107.90 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Source:MGI Symbol;Acc:MGI:108177]
93. Dmwd ENSMUSG00000030410 106.63 1107.90 dystrophia myotonica-containing WD repeat motif [Source:MGI Symbol;Acc:MGI:94907]
94. Eef2 ENSMUSG00000034994 106.63 1107.90 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
95. Eif4g1 ENSMUSG00000045983 106.63 1107.90 eukaryotic translation initiation factor 4, gamma 1 [Source:MGI Symbol;Acc:MGI:2384784]
96. Gm13936 ENSMUSG00000085444 106.63 1107.90 predicted gene 13936 [Source:MGI Symbol;Acc:MGI:3651878]
97. Gm21897 ENSMUSG00000094472 106.63 1107.90 predicted gene, 21897 [Source:MGI Symbol;Acc:MGI:5434061]
98. Gm5805 ENSMUSG00000061848 106.63 1107.90 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
99. H3f3b ENSMUSG00000016559 106.63 1107.90 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
100. Hnrnph1 ENSMUSG00000007850 106.63 1107.90 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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