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Experiment Mouse_E10_5_slice_1, section s63.

Sample reads: 96,252. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 5873.70 61024.21 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Cytb ENSMUSG00000064370 2379.22 24718.66 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Atp6 ENSMUSG00000064357 2323.46 24139.35 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. Gm10800 ENSMUSG00000075014 2156.17 22401.31 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
5. Ptma ENSMUSG00000026238 1654.30 17187.18 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
6. mt-Nd4 ENSMUSG00000064363 1394.07 14483.55 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
7. mt-Co2 ENSMUSG00000064354 1301.14 13518.06 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
8. mt-Rnr1 ENSMUSG00000064337 1263.96 13131.78 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
9. mt-Nd1 ENSMUSG00000064341 1208.20 12552.47 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
10. mt-Co1 ENSMUSG00000064351 1152.44 11973.16 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
11. mt-Nd2 ENSMUSG00000064345 1133.85 11780.02 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. mt-Nd5 ENSMUSG00000064367 855.03 8883.25 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
13. Actb ENSMUSG00000029580 743.51 7724.62 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. Eef1a1 ENSMUSG00000037742 631.98 6565.89 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. Gm17132 ENSMUSG00000061331 539.04 5600.30 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
16. mt-Nd3 ENSMUSG00000064360 483.28 5020.99 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
17. Peg3 ENSMUSG00000002265 353.17 3669.22 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
18. mt-Co3 ENSMUSG00000064358 353.17 3669.22 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
19. Mdk ENSMUSG00000027239 334.58 3476.08 midkine [Source:MGI Symbol;Acc:MGI:96949]
20. Gm26870 ENSMUSG00000097312 315.99 3282.95 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
21. Gm21897 ENSMUSG00000094472 297.40 3089.81 predicted gene, 21897 [Source:MGI Symbol;Acc:MGI:5434061]
22. H19 ENSMUSG00000000031 297.40 3089.81 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
23. Igf2 ENSMUSG00000048583 297.40 3089.81 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
24. Npm1 ENSMUSG00000057113 260.23 2703.63 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
25. Rps20 ENSMUSG00000028234 260.23 2703.63 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
26. Gpc3 ENSMUSG00000055653 241.64 2510.49 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
27. Hsp90ab1 ENSMUSG00000023944 241.64 2510.49 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
28. Rpl23 ENSMUSG00000071415 241.64 2510.49 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
29. Gm13340 ENSMUSG00000083563 204.46 2124.22 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
30. Hmga2 ENSMUSG00000056758 204.46 2124.22 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
31. Hnrnpc ENSMUSG00000060373 204.46 2124.22 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
32. Nedd4 ENSMUSG00000032216 204.46 2124.22 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
33. Chchd2 ENSMUSG00000070493 185.88 1931.18 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
34. Eif5a ENSMUSG00000078812 185.88 1931.18 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
35. Hsp90aa1 ENSMUSG00000021270 185.88 1931.18 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
36. Nasp ENSMUSG00000028693 185.88 1931.18 nuclear autoantigenic sperm protein (histone-binding) [Source:MGI Symbol;Acc:MGI:1355328]
37. Rpsa ENSMUSG00000032518 185.88 1931.18 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
38. Son ENSMUSG00000022961 185.88 1931.18 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
39. Tubb5 ENSMUSG00000001525 185.88 1931.18 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
40. Calm1 ENSMUSG00000001175 167.29 1738.04 calmodulin 1 [Source:MGI Symbol;Acc:MGI:88251]
41. Gm13936 ENSMUSG00000085444 167.29 1738.04 predicted gene 13936 [Source:MGI Symbol;Acc:MGI:3651878]
42. Gm17131 ENSMUSG00000085328 167.29 1738.04 predicted gene 17131 [Source:MGI Symbol;Acc:MGI:4937958]
43. Gpbp1 ENSMUSG00000032745 167.29 1738.04 GC-rich promoter binding protein 1 [Source:MGI Symbol;Acc:MGI:1920524]
44. Hnrnpa2b1 ENSMUSG00000004980 167.29 1738.04 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
45. Hspe1 ENSMUSG00000073676 167.29 1738.04 heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
46. Malat1 ENSMUSG00000092341 167.29 1738.04 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
47. Pkm ENSMUSG00000032294 167.29 1738.04 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
48. Rpl39-ps ENSMUSG00000036305 167.29 1738.04 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
49. Rps5 ENSMUSG00000012848 167.29 1738.04 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
50. Ybx1 ENSMUSG00000028639 167.29 1738.04 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
51. 2810417H13Rik 148.70 1544.90 RIKEN cDNA 2810417H13 gene
52. A830010M20Rik 148.70 1544.90 RIKEN cDNA A830010M20 gene, transcript variant 2
53. Eef1b2 ENSMUSG00000025967 148.70 1544.90 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
54. Gm26905 ENSMUSG00000097695 148.70 1544.90 predicted gene, 26905 [Source:MGI Symbol;Acc:MGI:5477399]
55. Hsp90b1 ENSMUSG00000020048 148.70 1544.90 heat shock protein 90, beta (Grp94), member 1 [Source:MGI Symbol;Acc:MGI:98817]
56. Pbx1 ENSMUSG00000052534 148.70 1544.90 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
57. Ran ENSMUSG00000029430 148.70 1544.90 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
58. Rpl4 ENSMUSG00000032399 148.70 1544.90 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
59. Rps3a1 ENSMUSG00000028081 148.70 1544.90 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
60. Tpm1 ENSMUSG00000032366 148.70 1544.90 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
61. Wbp5 148.70 1544.90 WW domain binding protein 5
62. Cfl1 ENSMUSG00000056201 130.11 1351.76 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
63. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 130.11 1351.76 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
64. Lpp ENSMUSG00000033306 130.11 1351.76 LIM domain containing preferred translocation partner in lipoma [Source:MGI Symbol;Acc:MGI:2441849]
65. Nme1 ENSMUSG00000037601 130.11 1351.76 NME/NM23 nucleoside diphosphate kinase 1 [Source:MGI Symbol;Acc:MGI:97355]
66. Rab10 ENSMUSG00000020671 130.11 1351.76 RAB10, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105066]
67. Srsf7 ENSMUSG00000024097 130.11 1351.76 serine/arginine-rich splicing factor 7 [Source:MGI Symbol;Acc:MGI:1926232]
68. Tmsb4x ENSMUSG00000049775 130.11 1351.76 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
69. Ywhaq ENSMUSG00000076432 130.11 1351.76 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:MGI Symbol;Acc:MGI:891963]
70. Arpc2 ENSMUSG00000006304 111.53 1158.73 actin related protein 2/3 complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1923959]
71. Atp5g3 ENSMUSG00000018770 111.53 1158.73 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
72. Grb10 ENSMUSG00000020176 111.53 1158.73 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
73. Meg3 ENSMUSG00000021268 111.53 1158.73 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
74. Ngfrap1 111.53 1158.73 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
75. Nucks1 ENSMUSG00000026434 111.53 1158.73 nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:MGI Symbol;Acc:MGI:1934811]
76. Rpl32 ENSMUSG00000057841 111.53 1158.73 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
77. Rps10-ps1 ENSMUSG00000060438 111.53 1158.73 ribosomal protein S10, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644167]
78. Rps4x ENSMUSG00000031320 111.53 1158.73 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
79. Smarcc1 ENSMUSG00000032481 111.53 1158.73 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:1203524]
80. Sub1 ENSMUSG00000022205 111.53 1158.73 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
81. Tmpo ENSMUSG00000019961 111.53 1158.73 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
82. Tpm4 ENSMUSG00000031799 111.53 1158.73 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
83. Tuba1b ENSMUSG00000023004 111.53 1158.73 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
84. Cdkn1c ENSMUSG00000037664 92.94 965.59 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
85. Col1a1 ENSMUSG00000001506 92.94 965.59 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
86. Col1a2 ENSMUSG00000029661 92.94 965.59 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
87. Ddx39b ENSMUSG00000019432 92.94 965.59 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]
88. Ddx3x ENSMUSG00000000787 92.94 965.59 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
89. Dpysl2 ENSMUSG00000022048 92.94 965.59 dihydropyrimidinase-like 2 [Source:MGI Symbol;Acc:MGI:1349763]
90. Eif3a ENSMUSG00000024991 92.94 965.59 eukaryotic translation initiation factor 3, subunit A [Source:MGI Symbol;Acc:MGI:95301]
91. Flna ENSMUSG00000031328 92.94 965.59 filamin, alpha [Source:MGI Symbol;Acc:MGI:95556]
92. Gm17555 ENSMUSG00000090353 92.94 965.59 predicted gene, 17555 [Source:MGI Symbol;Acc:MGI:4937189]
93. Gm26917 ENSMUSG00000097971 92.94 965.59 predicted gene, 26917 [Source:MGI Symbol;Acc:MGI:5504032]
94. Gm9769 92.94 965.59 predicted pseudogene 9769
95. Jak1 ENSMUSG00000028530 92.94 965.59 Janus kinase 1 [Source:MGI Symbol;Acc:MGI:96628]
96. Ldha ENSMUSG00000063229 92.94 965.59 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
97. Mapre1 ENSMUSG00000027479 92.94 965.59 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
98. Mfsd1 ENSMUSG00000027775 92.94 965.59 major facilitator superfamily domain containing 1 [Source:MGI Symbol;Acc:MGI:1914118]
99. Ncl ENSMUSG00000026234 92.94 965.59 nucleolin [Source:MGI Symbol;Acc:MGI:97286]
100. Ndufa4 ENSMUSG00000029632 92.94 965.59 Ndufa4, mitochondrial complex associated [Source:MGI Symbol;Acc:MGI:107686]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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