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Experiment Mouse_E10_5_slice_1, section s61.

Sample reads: 96,236. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 3619.74 37613.29 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. Ptma ENSMUSG00000026238 2189.99 22756.53 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
3. mt-Atp6 ENSMUSG00000064357 2020.78 20998.25 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
4. mt-Cytb ENSMUSG00000064370 1944.75 20208.21 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
5. mt-Co2 ENSMUSG00000064354 1934.94 20106.27 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd1 ENSMUSG00000064341 1775.54 18449.92 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Rnr1 ENSMUSG00000064337 1159.99 12053.64 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
8. mt-Nd4 ENSMUSG00000064363 1044.72 10855.85 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
9. Actb ENSMUSG00000029580 1007.94 10473.66 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
10. mt-Nd3 ENSMUSG00000064360 998.13 10371.73 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. mt-Co1 ENSMUSG00000064351 917.20 9530.77 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
12. mt-Nd2 ENSMUSG00000064345 755.34 7848.86 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
13. mt-Nd5 ENSMUSG00000064367 740.63 7696.00 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
14. Gm10800 ENSMUSG00000075014 657.24 6829.49 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
15. Eef1a1 ENSMUSG00000037742 522.36 5427.93 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
16. Igf2 ENSMUSG00000048583 456.15 4739.93 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. Rpsa ENSMUSG00000032518 424.27 4408.66 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
18. Mdk ENSMUSG00000027239 414.46 4306.72 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. H19 ENSMUSG00000000031 358.05 3720.55 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
20. Npm1 ENSMUSG00000057113 338.43 3516.68 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. Gm17132 ENSMUSG00000061331 284.48 2956.08 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
22. Nedd4 ENSMUSG00000032216 277.12 2879.60 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
23. mt-Co3 ENSMUSG00000064358 269.76 2803.12 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
24. Hsp90ab1 ENSMUSG00000023944 257.50 2675.72 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
25. Cfl1 ENSMUSG00000056201 255.05 2650.26 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
26. Tuba1b ENSMUSG00000023004 237.88 2471.85 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
27. Eif5a ENSMUSG00000078812 223.17 2318.99 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
28. Ybx1 ENSMUSG00000028639 213.36 2217.06 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
29. Rpl23 ENSMUSG00000071415 206.00 2140.58 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
30. Atp5g3 ENSMUSG00000018770 196.19 2038.64 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
31. Rplp1 ENSMUSG00000007892 196.19 2038.64 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
32. Pcbp1 ENSMUSG00000051695 183.93 1911.25 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
33. Eef1b2 ENSMUSG00000025967 181.48 1885.79 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
34. Rps3a1 ENSMUSG00000028081 179.03 1860.33 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
35. Set ENSMUSG00000054766 179.03 1860.33 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
36. Gm26870 ENSMUSG00000097312 174.12 1809.31 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
37. Ran ENSMUSG00000029430 174.12 1809.31 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
38. Hmgn1 ENSMUSG00000040681 164.31 1707.37 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
39. Gm13340 ENSMUSG00000083563 156.95 1630.89 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
40. Tmsb4x ENSMUSG00000049775 156.95 1630.89 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
41. Peg3 ENSMUSG00000002265 154.50 1605.43 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
42. Rpl4 ENSMUSG00000032399 154.50 1605.43 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
43. Hmga2 ENSMUSG00000056758 149.60 1554.52 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
44. Rps20 ENSMUSG00000028234 149.60 1554.52 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
45. Rps26 ENSMUSG00000025362 149.60 1554.52 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
46. Eif4g2 ENSMUSG00000005610 147.14 1528.96 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
47. Ubb ENSMUSG00000019505 147.14 1528.96 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
48. Ywhab ENSMUSG00000018326 147.14 1528.96 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
49. Malat1 ENSMUSG00000092341 142.24 1478.04 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
50. Marcksl1 ENSMUSG00000047945 142.24 1478.04 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
51. Chchd2 ENSMUSG00000070493 139.79 1452.58 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
52. Hbb-y ENSMUSG00000052187 139.79 1452.58 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
53. Son ENSMUSG00000022961 137.33 1427.02 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
54. Rps4x ENSMUSG00000031320 132.43 1376.10 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
55. Tubb5 ENSMUSG00000001525 129.98 1350.64 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
56. Hnrnpc ENSMUSG00000060373 127.52 1325.08 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
57. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 127.52 1325.08 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
58. Marcks ENSMUSG00000069662 125.07 1299.62 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
59. Rpl32 ENSMUSG00000057841 125.07 1299.62 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
60. Tpt1 ENSMUSG00000060126 125.07 1299.62 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
61. Hsp90aa1 ENSMUSG00000021270 122.62 1274.16 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
62. Eef1g ENSMUSG00000071644 120.17 1248.71 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
63. H3f3b ENSMUSG00000016559 120.17 1248.71 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
64. Wbp5 120.17 1248.71 WW domain binding protein 5
65. Sfrp1 ENSMUSG00000031548 115.26 1197.68 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
66. Rps5 ENSMUSG00000012848 112.81 1172.23 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
67. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 112.81 1172.23 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
68. Igfbp5 ENSMUSG00000026185 110.36 1146.77 insulin-like growth factor binding protein 5 [Source:MGI Symbol;Acc:MGI:96440]
69. Ngfrap1 110.36 1146.77 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
70. Pabpc1 ENSMUSG00000022283 107.91 1121.31 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
71. Hnrnph1 ENSMUSG00000007850 105.45 1095.75 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
72. Anp32b ENSMUSG00000028333 103.00 1070.29 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
73. Gm14586 ENSMUSG00000083621 103.00 1070.29 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
74. Tmsb10 ENSMUSG00000079523 103.00 1070.29 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
75. Col1a1 ENSMUSG00000001506 100.55 1044.83 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
76. Eef2 ENSMUSG00000034994 100.55 1044.83 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
77. Grb10 ENSMUSG00000020176 100.55 1044.83 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
78. Mapre1 ENSMUSG00000027479 100.55 1044.83 microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
79. Rpl39-ps ENSMUSG00000036305 100.55 1044.83 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
80. Tpm1 ENSMUSG00000032366 100.55 1044.83 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
81. Pkm ENSMUSG00000032294 98.10 1019.37 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
82. Ptn ENSMUSG00000029838 95.64 993.81 pleiotrophin [Source:MGI Symbol;Acc:MGI:97804]
83. Rpl37 ENSMUSG00000041841 95.64 993.81 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
84. 2810417H13Rik 93.19 968.35 RIKEN cDNA 2810417H13 gene
85. Ago2 ENSMUSG00000036698 93.19 968.35 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
86. Fkbp1a ENSMUSG00000032966 90.74 942.89 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
87. Gnai2 ENSMUSG00000032562 90.74 942.89 guanine nucleotide binding protein (G protein), alpha inhibiting 2 [Source:MGI Symbol;Acc:MGI:95772]
88. Gpc3 ENSMUSG00000055653 90.74 942.89 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
89. Meg3 ENSMUSG00000021268 90.74 942.89 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
90. Nucks1 ENSMUSG00000026434 90.74 942.89 nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:MGI Symbol;Acc:MGI:1934811]
91. Rps9 ENSMUSG00000006333 90.74 942.89 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
92. Ywhaz ENSMUSG00000022285 90.74 942.89 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
93. Gnb2l1 Gnb2l1 88.29 917.44
94. Serpinh1 ENSMUSG00000070436 88.29 917.44 serine (or cysteine) peptidase inhibitor, clade H, member 1 [Source:MGI Symbol;Acc:MGI:88283]
95. Tuba1a ENSMUSG00000072235 88.29 917.44 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
96. Atxn7l3b ENSMUSG00000074748 85.83 891.87 ataxin 7-like 3B [Source:MGI Symbol;Acc:MGI:1914971]
97. Gm13936 ENSMUSG00000085444 85.83 891.87 predicted gene 13936 [Source:MGI Symbol;Acc:MGI:3651878]
98. Hnrnpa2b1 ENSMUSG00000004980 85.83 891.87 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
99. Serbp1 ENSMUSG00000036371 85.83 891.87 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
100. Crabp1 ENSMUSG00000032291 83.38 866.41 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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