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Experiment Mouse_E10_5_slice_1, section s53.

Sample reads: 96,234. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 5098.84 52984.02 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Atp6 ENSMUSG00000064357 2117.51 22003.86 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. Ptma ENSMUSG00000026238 1982.88 20604.87 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
4. mt-Cytb ENSMUSG00000064370 1938.01 20138.61 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
5. mt-Co2 ENSMUSG00000064354 1780.95 18506.54 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd1 ENSMUSG00000064341 1435.98 14921.82 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Rnr1 ENSMUSG00000064337 1391.10 14455.46 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
8. mt-Co1 ENSMUSG00000064351 1169.54 12153.14 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Nd4 ENSMUSG00000064363 1155.51 12007.35 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
10. mt-Nd5 ENSMUSG00000064367 1127.47 11715.98 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
11. Actb ENSMUSG00000029580 905.90 9413.56 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. mt-Nd3 ENSMUSG00000064360 827.37 8597.52 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
13. mt-Nd2 ENSMUSG00000064345 779.69 8102.06 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
14. Eef1a1 ENSMUSG00000037742 647.87 6732.27 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. Igf2 ENSMUSG00000048583 588.98 6120.32 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
16. Mdk ENSMUSG00000027239 513.25 5333.38 midkine [Source:MGI Symbol;Acc:MGI:96949]
17. Gm10800 ENSMUSG00000075014 473.98 4925.31 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
18. H19 ENSMUSG00000000031 395.45 4109.27 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
19. Hsp90ab1 ENSMUSG00000023944 322.53 3351.53 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
20. Npm1 ENSMUSG00000057113 302.90 3147.55 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. mt-Co3 ENSMUSG00000064358 300.10 3118.46 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
22. Rpsa ENSMUSG00000032518 297.29 3089.26 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
23. Nedd4 ENSMUSG00000032216 252.42 2622.99 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
24. Peg3 ENSMUSG00000002265 252.42 2622.99 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
25. Ybx1 ENSMUSG00000028639 227.18 2360.72 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
26. Malat1 ENSMUSG00000092341 207.54 2156.63 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
27. Rpl23 ENSMUSG00000071415 207.54 2156.63 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
28. Cfl1 ENSMUSG00000056201 204.74 2127.53 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
29. Gm17132 ENSMUSG00000061331 204.74 2127.53 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
30. Eef1b2 ENSMUSG00000025967 199.13 2069.24 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
31. Rps3a1 ENSMUSG00000028081 196.33 2040.14 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
32. Hmga2 ENSMUSG00000056758 187.91 1952.65 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
33. Col1a1 ENSMUSG00000001506 173.89 1806.96 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
34. Gm13340 ENSMUSG00000083563 173.89 1806.96 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
35. Eif4g2 ENSMUSG00000005610 171.08 1777.76 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
36. Eif5a ENSMUSG00000078812 171.08 1777.76 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
37. Ran ENSMUSG00000029430 162.67 1690.37 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
38. Atp5g3 ENSMUSG00000018770 145.84 1515.48 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
39. Rps4x ENSMUSG00000031320 145.84 1515.48 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
40. Son ENSMUSG00000022961 145.84 1515.48 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
41. Tpt1 ENSMUSG00000060126 145.84 1515.48 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
42. Tuba1b ENSMUSG00000023004 143.04 1486.38 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
43. Ubb ENSMUSG00000019505 143.04 1486.38 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
44. Chchd2 ENSMUSG00000070493 137.43 1428.09 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
45. Marcksl1 ENSMUSG00000047945 137.43 1428.09 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
46. Pabpc1 ENSMUSG00000022283 137.43 1428.09 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
47. Marcks ENSMUSG00000069662 131.82 1369.79 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
48. Tmsb4x ENSMUSG00000049775 131.82 1369.79 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
49. Wbp5 129.01 1340.59 WW domain binding protein 5
50. Gm26870 ENSMUSG00000097312 126.21 1311.50 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
51. Hmgn1 ENSMUSG00000040681 126.21 1311.50 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
52. Rpl4 ENSMUSG00000032399 126.21 1311.50 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
53. Rps20 ENSMUSG00000028234 126.21 1311.50 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
54. Sfrp1 ENSMUSG00000031548 126.21 1311.50 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
55. Hnrnph1 ENSMUSG00000007850 123.40 1282.30 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
56. Ago2 ENSMUSG00000036698 120.60 1253.20 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
57. Fn1 ENSMUSG00000026193 120.60 1253.20 fibronectin 1 [Source:MGI Symbol;Acc:MGI:95566]
58. Rpl32 ENSMUSG00000057841 120.60 1253.20 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
59. Pbx1 ENSMUSG00000052534 117.80 1224.11 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
60. Pcbp1 ENSMUSG00000051695 117.80 1224.11 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
61. Rpl39-ps ENSMUSG00000036305 117.80 1224.11 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
62. Grb10 ENSMUSG00000020176 114.99 1194.91 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
63. H3f3b ENSMUSG00000016559 114.99 1194.91 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
64. Tubb5 ENSMUSG00000001525 114.99 1194.91 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
65. Set ENSMUSG00000054766 112.19 1165.81 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
66. Trim28 ENSMUSG00000005566 112.19 1165.81 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
67. Hnrnpc ENSMUSG00000060373 109.38 1136.61 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
68. Hnrnpa2b1 ENSMUSG00000004980 106.58 1107.51 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
69. Hsp90aa1 ENSMUSG00000021270 106.58 1107.51 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
70. Meg3 ENSMUSG00000021268 106.58 1107.51 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
71. Ngfrap1 106.58 1107.51 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
72. Pkm ENSMUSG00000032294 106.58 1107.51 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
73. Rps26 ENSMUSG00000025362 106.58 1107.51 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
74. Tpm1 ENSMUSG00000032366 106.58 1107.51 tropomyosin 1, alpha [Source:MGI Symbol;Acc:MGI:98809]
75. Anp32b ENSMUSG00000028333 103.77 1078.31 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
76. Gm14586 ENSMUSG00000083621 100.97 1049.22 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
77. Igfbp5 ENSMUSG00000026185 100.97 1049.22 insulin-like growth factor binding protein 5 [Source:MGI Symbol;Acc:MGI:96440]
78. Serbp1 ENSMUSG00000036371 100.97 1049.22 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
79. Ywhaz ENSMUSG00000022285 100.97 1049.22 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:MGI Symbol;Acc:MGI:109484]
80. Rpl8 ENSMUSG00000003970 98.16 1020.02 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
81. Ywhab ENSMUSG00000018326 98.16 1020.02 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
82. Col3a1 ENSMUSG00000026043 95.36 990.92 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
83. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 95.36 990.92 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
84. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 92.55 961.72 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
85. Col1a2 ENSMUSG00000029661 89.75 932.63 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
86. Eef2 ENSMUSG00000034994 89.75 932.63 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
87. Eef1g ENSMUSG00000071644 86.94 903.43 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
88. Hnrnpa0 ENSMUSG00000007836 86.94 903.43 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
89. Nucks1 ENSMUSG00000026434 86.94 903.43 nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:MGI Symbol;Acc:MGI:1934811]
90. Rbms1 ENSMUSG00000026970 86.94 903.43 RNA binding motif, single stranded interacting protein 1 [Source:MGI Symbol;Acc:MGI:1861774]
91. Rpl13a ENSMUSG00000074129 86.94 903.43 ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
92. Rps9 ENSMUSG00000006333 86.94 903.43 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
93. U2af2 ENSMUSG00000030435 86.94 903.43 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
94. Gpc3 ENSMUSG00000055653 84.14 874.33 glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
95. Rplp1 ENSMUSG00000007892 84.14 874.33 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
96. Tsn ENSMUSG00000026374 84.14 874.33 translin [Source:MGI Symbol;Acc:MGI:109263]
97. Crabp1 ENSMUSG00000032291 81.33 845.13 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
98. Ddx5 ENSMUSG00000020719 81.33 845.13 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
99. Fkbp1a ENSMUSG00000032966 81.33 845.13 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
100. Gm14303 ENSMUSG00000081344 81.33 845.13 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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