Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Experiment Mouse_E10_5_slice_1, section s45.

Sample reads: 96,258. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Atp6 ENSMUSG00000064357 4405.08 45763.45 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
2. mt-Rnr2 ENSMUSG00000064339 3998.82 41542.90 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
3. mt-Cytb ENSMUSG00000064370 3328.43 34578.36 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Co2 ENSMUSG00000064354 2386.08 24788.48 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Co1 ENSMUSG00000064351 1715.70 17824.05 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
6. mt-Nd1 ENSMUSG00000064341 1688.84 17545.00 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Nd4 ENSMUSG00000064363 1641.83 17056.63 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
8. Ptma ENSMUSG00000026238 1599.30 16614.79 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
9. mt-Nd3 ENSMUSG00000064360 1370.99 14242.93 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
10. mt-Nd2 ENSMUSG00000064345 1315.03 13661.57 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
11. mt-Nd5 ENSMUSG00000064367 1182.97 12289.63 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
12. mt-Rnr1 ENSMUSG00000064337 1172.90 12185.01 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
13. Actb ENSMUSG00000029580 942.35 9789.88 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. Eef1a1 ENSMUSG00000037742 703.96 7313.29 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. mt-Co3 ENSMUSG00000064358 568.54 5906.44 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
16. Igf2 ENSMUSG00000048583 534.97 5557.69 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
17. H19 ENSMUSG00000000031 514.82 5348.36 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
18. Mdk ENSMUSG00000027239 446.55 4639.11 midkine [Source:MGI Symbol;Acc:MGI:96949]
19. Rpsa ENSMUSG00000032518 364.85 3790.35 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
20. Npm1 ENSMUSG00000057113 274.20 2848.61 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. Gm10800 ENSMUSG00000075014 239.50 2488.11 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
22. Gm13340 ENSMUSG00000083563 231.67 2406.77 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
23. Cfl1 ENSMUSG00000056201 230.55 2395.14 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
24. Peg3 ENSMUSG00000002265 214.88 2232.34 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
25. Nedd4 ENSMUSG00000032216 213.76 2220.71 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
26. Rps20 ENSMUSG00000028234 209.29 2174.27 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
27. Rpl23 ENSMUSG00000071415 205.93 2139.36 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
28. Rps26 ENSMUSG00000025362 198.09 2057.92 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
29. Rps3a1 ENSMUSG00000028081 177.95 1848.69 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
30. Tuba1b ENSMUSG00000023004 176.83 1837.05 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
31. Rpl39-ps ENSMUSG00000036305 165.64 1720.80 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
32. Eif4g2 ENSMUSG00000005610 164.52 1709.16 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
33. Eef1b2 ENSMUSG00000025967 163.40 1697.53 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
34. Gm17132 ENSMUSG00000061331 160.04 1662.62 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
35. Hsp90aa1 ENSMUSG00000021270 157.80 1639.35 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
36. Rpl32 ENSMUSG00000057841 156.68 1627.72 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
37. Col1a1 ENSMUSG00000001506 154.45 1604.55 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
38. Rpl4 ENSMUSG00000032399 154.45 1604.55 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
39. Tpt1 ENSMUSG00000060126 151.09 1569.64 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
40. Tubb5 ENSMUSG00000001525 151.09 1569.64 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
41. Eif5a ENSMUSG00000078812 144.37 1499.83 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
42. Rps4x ENSMUSG00000031320 142.14 1476.66 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
43. Ubb ENSMUSG00000019505 138.78 1441.76 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
44. Hsp90ab1 ENSMUSG00000023944 136.54 1418.49 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
45. Pabpc1 ENSMUSG00000022283 136.54 1418.49 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
46. Hnrnph1 ENSMUSG00000007850 133.18 1383.58 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
47. Grb10 ENSMUSG00000020176 132.06 1371.94 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
48. Malat1 ENSMUSG00000092341 132.06 1371.94 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
49. Hmga2 ENSMUSG00000056758 126.47 1313.87 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
50. Hmgn1 ENSMUSG00000040681 126.47 1313.87 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
51. Marcks ENSMUSG00000069662 126.47 1313.87 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
52. Ran ENSMUSG00000029430 126.47 1313.87 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
53. Sfrp1 ENSMUSG00000031548 126.47 1313.87 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
54. Wbp5 121.99 1267.33 WW domain binding protein 5
55. Rpl37 ENSMUSG00000041841 120.87 1255.69 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
56. H3f3b ENSMUSG00000016559 119.75 1244.06 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
57. Ybx1 ENSMUSG00000028639 119.75 1244.06 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
58. Pkm ENSMUSG00000032294 116.39 1209.15 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
59. Col3a1 ENSMUSG00000026043 114.16 1185.98 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
60. Chchd2 ENSMUSG00000070493 113.04 1174.35 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
61. Rpl18a ENSMUSG00000045128 113.04 1174.35 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
62. Atp5g3 ENSMUSG00000018770 110.80 1151.08 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
63. Gm14586 ENSMUSG00000083621 110.80 1151.08 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
64. Hnrnpc ENSMUSG00000060373 110.80 1151.08 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
65. Meg3 ENSMUSG00000021268 109.68 1139.44 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
66. Rplp1 ENSMUSG00000007892 109.68 1139.44 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
67. Gm5963 ENSMUSG00000052192 107.44 1116.17 predicted pseudogene 5963 [Source:MGI Symbol;Acc:MGI:3648418]
68. Tmsb10 ENSMUSG00000079523 106.32 1104.54 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
69. Gm14303 ENSMUSG00000081344 104.08 1081.27 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
70. Hnrnpa2b1 ENSMUSG00000004980 102.96 1069.63 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
71. Paics ENSMUSG00000029247 101.85 1058.10 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
72. Fkbp1a ENSMUSG00000032966 99.61 1034.83 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
73. Ngfrap1 96.25 999.92 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
74. Crabp1 ENSMUSG00000032291 95.13 988.29 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
75. Cdk4 ENSMUSG00000006728 92.89 965.01 cyclin-dependent kinase 4 [Source:MGI Symbol;Acc:MGI:88357]
76. Son ENSMUSG00000022961 92.89 965.01 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
77. Set ENSMUSG00000054766 91.77 953.38 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
78. Eef2 ENSMUSG00000034994 88.41 918.47 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
79. Rpl8 ENSMUSG00000003970 88.41 918.47 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
80. Gm8292 ENSMUSG00000100215 87.30 906.94 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
81. Rps5 ENSMUSG00000012848 86.18 895.31 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
82. Gnb2l1 Gnb2l1 83.94 872.03
83. Hnrnpk ENSMUSG00000021546 81.70 848.76 heterogeneous nuclear ribonucleoprotein K [Source:MGI Symbol;Acc:MGI:99894]
84. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 81.70 848.76 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
85. Serbp1 ENSMUSG00000036371 81.70 848.76 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
86. Marcksl1 ENSMUSG00000047945 80.58 837.13 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
87. Srsf3 ENSMUSG00000071172 80.58 837.13 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
88. Ywhab ENSMUSG00000018326 80.58 837.13 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
89. Sub1 ENSMUSG00000022205 79.46 825.49 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
90. Tmpo ENSMUSG00000019961 79.46 825.49 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
91. Tmsb4x ENSMUSG00000049775 79.46 825.49 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
92. Top2a ENSMUSG00000020914 79.46 825.49 topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
93. Banf1 ENSMUSG00000024844 78.34 813.86 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
94. Morf4l1 ENSMUSG00000062270 77.22 802.22 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
95. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 77.22 802.22 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
96. Gm5805 ENSMUSG00000061848 76.10 790.59 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
97. Pcbp1 ENSMUSG00000051695 76.10 790.59 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
98. Ddx3x ENSMUSG00000000787 74.98 778.95 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
99. Rpl26 ENSMUSG00000060938 74.98 778.95 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
100. Rrm2 ENSMUSG00000020649 74.98 778.95 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
First Previous 1 2 3 Next Last
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA