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Experiment Mouse_E10_5_slice_1, section s43.

Sample reads: 96,237. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Atp6 ENSMUSG00000064357 3564.58 37039.55 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
2. mt-Cytb ENSMUSG00000064370 3492.11 36286.52 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Rnr2 ENSMUSG00000064339 3092.39 32133.03 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
4. mt-Co2 ENSMUSG00000064354 2493.39 25908.82 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
5. mt-Nd1 ENSMUSG00000064341 1943.08 20190.55 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. Ptma ENSMUSG00000026238 1785.68 18555.00 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
7. mt-Co1 ENSMUSG00000064351 1624.89 16884.23 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Nd2 ENSMUSG00000064345 1526.38 15860.62 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
9. mt-Nd4 ENSMUSG00000064363 1511.66 15707.66 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
10. mt-Nd3 ENSMUSG00000064360 1204.80 12519.08 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. mt-Rnr1 ENSMUSG00000064337 981.73 10201.16 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
12. mt-Nd5 ENSMUSG00000064367 955.69 9930.58 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
13. Actb ENSMUSG00000029580 900.20 9353.98 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. Eef1a1 ENSMUSG00000037742 748.47 7777.35 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. H19 ENSMUSG00000000031 500.49 5200.59 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
16. Mdk ENSMUSG00000027239 477.84 4965.24 midkine [Source:MGI Symbol;Acc:MGI:96949]
17. mt-Co3 ENSMUSG00000064358 477.84 4965.24 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. Rpsa ENSMUSG00000032518 471.05 4894.68 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
19. Igf2 ENSMUSG00000048583 458.59 4765.21 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
20. Npm1 ENSMUSG00000057113 306.86 3188.58 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. Nedd4 ENSMUSG00000032216 250.24 2600.24 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
22. Rpl23 ENSMUSG00000071415 236.66 2459.13 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
23. Hsp90ab1 ENSMUSG00000023944 219.67 2282.59 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
24. Peg3 ENSMUSG00000002265 218.54 2270.85 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
25. Gm13340 ENSMUSG00000083563 206.08 2141.38 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
26. Cfl1 ENSMUSG00000056201 193.63 2012.01 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
27. Rps20 ENSMUSG00000028234 191.36 1988.42 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
28. Tubb5 ENSMUSG00000001525 186.83 1941.35 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
29. Rps26 ENSMUSG00000025362 178.91 1859.05 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
30. Rps3a1 ENSMUSG00000028081 169.85 1764.91 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
31. Tuba1b ENSMUSG00000023004 168.72 1753.17 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
32. Eef1b2 ENSMUSG00000025967 165.32 1717.84 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
33. Eif5a ENSMUSG00000078812 158.53 1647.29 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
34. Chchd2 ENSMUSG00000070493 156.26 1623.70 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
35. Rps4x ENSMUSG00000031320 156.26 1623.70 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
36. Tpt1 ENSMUSG00000060126 151.73 1576.63 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
37. Hnrnpc ENSMUSG00000060373 150.60 1564.88 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
38. Ran ENSMUSG00000029430 150.60 1564.88 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
39. Ybx1 ENSMUSG00000028639 147.20 1529.56 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
40. Rpl32 ENSMUSG00000057841 143.81 1494.33 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
41. Rpl4 ENSMUSG00000032399 142.67 1482.48 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
42. Ubb ENSMUSG00000019505 142.67 1482.48 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
43. Atp5g3 ENSMUSG00000018770 139.28 1447.26 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
44. Rplp1 ENSMUSG00000007892 139.28 1447.26 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
45. Hmga2 ENSMUSG00000056758 138.14 1435.41 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
46. Eif4g2 ENSMUSG00000005610 132.48 1376.60 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
47. Hmgn1 ENSMUSG00000040681 130.22 1353.12 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
48. Wbp5 130.22 1353.12 WW domain binding protein 5
49. Rpl39-ps ENSMUSG00000036305 125.69 1306.04 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
50. Hsp90aa1 ENSMUSG00000021270 123.42 1282.46 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
51. Rps5 ENSMUSG00000012848 122.29 1270.72 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
52. Sfrp1 ENSMUSG00000031548 122.29 1270.72 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
53. Col1a1 ENSMUSG00000001506 118.89 1235.39 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
54. Pabpc1 ENSMUSG00000022283 118.89 1235.39 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
55. Gm14586 ENSMUSG00000083621 117.76 1223.64 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
56. Rpl37 ENSMUSG00000041841 117.76 1223.64 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
57. Son ENSMUSG00000022961 117.76 1223.64 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
58. Gm10800 ENSMUSG00000075014 116.63 1211.90 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
59. Grb10 ENSMUSG00000020176 116.63 1211.90 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
60. Pkm ENSMUSG00000032294 116.63 1211.90 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
61. Ngfrap1 115.50 1200.16 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
62. Gm17132 ENSMUSG00000061331 112.10 1164.83 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
63. Ywhab ENSMUSG00000018326 110.97 1153.09 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
64. Crabp1 ENSMUSG00000032291 109.84 1141.35 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
65. Tmsb4x ENSMUSG00000049775 108.70 1129.50 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
66. Rpl18a ENSMUSG00000045128 106.44 1106.02 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
67. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 105.31 1094.28 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
68. Marcksl1 ENSMUSG00000047945 103.04 1070.69 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
69. Pbx1 ENSMUSG00000052534 103.04 1070.69 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
70. Hnrnph1 ENSMUSG00000007850 101.91 1058.95 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
71. Meg3 ENSMUSG00000021268 100.78 1047.21 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
72. Set ENSMUSG00000054766 100.78 1047.21 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
73. Col3a1 ENSMUSG00000026043 98.51 1023.62 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
74. Hnrnpa2b1 ENSMUSG00000004980 97.38 1011.88 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
75. Eef2 ENSMUSG00000034994 95.12 988.39 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
76. Malat1 ENSMUSG00000092341 95.12 988.39 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
77. Pcbp1 ENSMUSG00000051695 95.12 988.39 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
78. Paics ENSMUSG00000029247 91.72 953.06 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
79. Gm14303 ENSMUSG00000081344 89.45 929.48 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
80. Rps9 ENSMUSG00000006333 89.45 929.48 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
81. Serbp1 ENSMUSG00000036371 89.45 929.48 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
82. Marcks ENSMUSG00000069662 86.06 894.25 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
83. Gnb2l1 Gnb2l1 84.92 882.40
84. H3f3b ENSMUSG00000016559 84.92 882.40 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
85. Banf1 ENSMUSG00000024844 83.79 870.66 barrier to autointegration factor 1 [Source:MGI Symbol;Acc:MGI:1346330]
86. Tmsb10 ENSMUSG00000079523 82.66 858.92 thymosin, beta 10 [Source:MGI Symbol;Acc:MGI:109146]
87. Caprin1 ENSMUSG00000027184 81.53 847.18 cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
88. 2810417H13Rik 80.40 835.44 RIKEN cDNA 2810417H13 gene
89. Gm5805 ENSMUSG00000061848 80.40 835.44 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
90. Rpl13a ENSMUSG00000074129 80.40 835.44 ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
91. Rrm2 ENSMUSG00000020649 80.40 835.44 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
92. Ywhae ENSMUSG00000020849 80.40 835.44 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
93. Ago2 ENSMUSG00000036698 79.26 823.59 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
94. Eef1g ENSMUSG00000071644 79.26 823.59 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
95. Gm8292 ENSMUSG00000100215 79.26 823.59 predicted gene 8292 [Source:MGI Symbol;Acc:MGI:3648460]
96. Hnrnpa0 ENSMUSG00000007836 79.26 823.59 heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
97. Rpl26 ENSMUSG00000060938 79.26 823.59 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
98. Fkbp1a ENSMUSG00000032966 78.13 811.85 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
99. Morf4l1 ENSMUSG00000062270 78.13 811.85 mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
100. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 78.13 811.85 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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