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Experiment Mouse_E10_5_slice_1, section s42.

Sample reads: 96,238. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 6044.76 62810.67 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Rnr1 ENSMUSG00000064337 2847.70 29590.25 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
3. mt-Cytb ENSMUSG00000064370 2829.42 29400.30 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. mt-Atp6 ENSMUSG00000064357 2825.36 29358.11 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
5. mt-Co2 ENSMUSG00000064354 2000.70 20789.13 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. Ptma ENSMUSG00000026238 1767.12 18362.02 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
7. mt-Nd1 ENSMUSG00000064341 1608.69 16715.78 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
8. mt-Co1 ENSMUSG00000064351 1350.73 14035.34 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Nd4 ENSMUSG00000064363 1304.01 13549.87 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
10. mt-Nd5 ENSMUSG00000064367 1117.14 11608.12 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
11. mt-Nd2 ENSMUSG00000064345 1048.08 10890.52 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
12. mt-Nd3 ENSMUSG00000064360 796.22 8273.47 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
13. Actb ENSMUSG00000029580 741.38 7703.63 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. Eef1a1 ENSMUSG00000037742 584.98 6078.49 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. mt-Co3 ENSMUSG00000064358 556.54 5782.97 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
16. Mdk ENSMUSG00000027239 473.26 4917.61 midkine [Source:MGI Symbol;Acc:MGI:96949]
17. Igf2 ENSMUSG00000048583 446.86 4643.29 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
18. Rpsa ENSMUSG00000032518 359.52 3735.75 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
19. Gm10800 ENSMUSG00000075014 349.36 3630.17 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
20. H19 ENSMUSG00000000031 335.14 3482.42 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
21. Npm1 ENSMUSG00000057113 304.68 3165.91 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
22. Nedd4 ENSMUSG00000032216 229.52 2384.93 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
23. Tuba1b ENSMUSG00000023004 229.52 2384.93 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
24. Peg3 ENSMUSG00000002265 223.43 2321.65 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
25. Rps20 ENSMUSG00000028234 219.37 2279.46 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
26. Rpl23 ENSMUSG00000071415 211.24 2194.98 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
27. Rps3a1 ENSMUSG00000028081 209.21 2173.89 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
28. Chchd2 ENSMUSG00000070493 203.12 2110.61 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
29. Eef1b2 ENSMUSG00000025967 184.84 1920.66 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
30. Set ENSMUSG00000054766 178.74 1857.27 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
31. Gm13340 ENSMUSG00000083563 176.71 1836.18 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
32. Hmga2 ENSMUSG00000056758 174.68 1815.09 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
33. Hsp90ab1 ENSMUSG00000023944 172.65 1793.99 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
34. Gm17132 ENSMUSG00000061331 170.62 1772.90 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
35. Tubb5 ENSMUSG00000001525 170.62 1772.90 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
36. Eif5a ENSMUSG00000078812 166.56 1730.71 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
37. Rps26 ENSMUSG00000025362 160.46 1667.33 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
38. Rplp1 ENSMUSG00000007892 154.37 1604.05 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
39. Ran ENSMUSG00000029430 152.34 1582.95 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
40. Rps4x ENSMUSG00000031320 148.28 1540.77 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
41. Tpt1 ENSMUSG00000060126 148.28 1540.77 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
42. Gm26870 ENSMUSG00000097312 146.24 1519.57 predicted gene, 26870 [Source:MGI Symbol;Acc:MGI:5477364]
43. Rpl4 ENSMUSG00000032399 146.24 1519.57 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
44. Ybx1 ENSMUSG00000028639 144.21 1498.48 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
45. Rpl32 ENSMUSG00000057841 140.15 1456.29 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
46. Pkm ENSMUSG00000032294 138.12 1435.20 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
47. Ubb ENSMUSG00000019505 132.03 1371.91 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
48. Atp5g3 ENSMUSG00000018770 129.99 1350.72 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
49. Gm14303 ENSMUSG00000081344 129.99 1350.72 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
50. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 129.99 1350.72 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
51. Sfrp1 ENSMUSG00000031548 129.99 1350.72 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
52. Cfl1 ENSMUSG00000056201 127.96 1329.62 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
53. Pabpc1 ENSMUSG00000022283 127.96 1329.62 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
54. Rpl39-ps ENSMUSG00000036305 127.96 1329.62 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
55. Hmgn1 ENSMUSG00000040681 125.93 1308.53 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
56. Marcksl1 ENSMUSG00000047945 123.90 1287.44 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
57. Hsp90aa1 ENSMUSG00000021270 119.84 1245.25 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
58. Col1a1 ENSMUSG00000001506 117.81 1224.16 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
59. Malat1 ENSMUSG00000092341 117.81 1224.16 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
60. Marcks ENSMUSG00000069662 117.81 1224.16 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
61. Col3a1 ENSMUSG00000026043 115.78 1203.06 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
62. Eif4g2 ENSMUSG00000005610 115.78 1203.06 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
63. Hnrnpc ENSMUSG00000060373 113.75 1181.97 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
64. Rpl18a ENSMUSG00000045128 113.75 1181.97 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
65. Wbp5 113.75 1181.97 WW domain binding protein 5
66. Pcbp1 ENSMUSG00000051695 111.71 1160.77 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
67. Gm14586 ENSMUSG00000083621 107.65 1118.58 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
68. H3f3b ENSMUSG00000016559 107.65 1118.58 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
69. Grb10 ENSMUSG00000020176 103.59 1076.40 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
70. Ywhab ENSMUSG00000018326 103.59 1076.40 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
71. Son ENSMUSG00000022961 101.56 1055.30 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
72. Tmsb4x ENSMUSG00000049775 101.56 1055.30 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
73. Hnrnpa2b1 ENSMUSG00000004980 99.53 1034.21 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
74. Tuba1a ENSMUSG00000072235 99.53 1034.21 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
75. Pbx1 ENSMUSG00000052534 97.50 1013.12 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
76. Rpl37 ENSMUSG00000041841 97.50 1013.12 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
77. Rps5 ENSMUSG00000012848 95.46 991.92 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
78. Crabp1 ENSMUSG00000032291 93.43 970.82 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
79. Ldha ENSMUSG00000063229 91.40 949.73 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
80. Tmpo ENSMUSG00000019961 91.40 949.73 thymopoietin [Source:MGI Symbol;Acc:MGI:106920]
81. Anp32b ENSMUSG00000028333 89.37 928.64 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
82. Gm5805 ENSMUSG00000061848 89.37 928.64 predicted gene 5805 [Source:MGI Symbol;Acc:MGI:3644633]
83. Hnrnph1 ENSMUSG00000007850 89.37 928.64 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
84. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 89.37 928.64 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
85. Txn1 ENSMUSG00000028367 89.37 928.64 thioredoxin 1 [Source:MGI Symbol;Acc:MGI:98874]
86. Eef1g ENSMUSG00000071644 87.34 907.54 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
87. Meg3 ENSMUSG00000021268 87.34 907.54 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
88. 2810417H13Rik 85.31 886.45 RIKEN cDNA 2810417H13 gene
89. Ddx5 ENSMUSG00000020719 85.31 886.45 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
90. Paics ENSMUSG00000029247 85.31 886.45 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
91. Srsf3 ENSMUSG00000071172 85.31 886.45 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
92. Tsc22d1 ENSMUSG00000022010 83.28 865.36 TSC22 domain family, member 1 [Source:MGI Symbol;Acc:MGI:109127]
93. Gas1 ENSMUSG00000052957 81.25 844.26 growth arrest specific 1 [Source:MGI Symbol;Acc:MGI:95655]
94. Nasp ENSMUSG00000028693 81.25 844.26 nuclear autoantigenic sperm protein (histone-binding) [Source:MGI Symbol;Acc:MGI:1355328]
95. Nucks1 ENSMUSG00000026434 81.25 844.26 nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:MGI Symbol;Acc:MGI:1934811]
96. Trim28 ENSMUSG00000005566 81.25 844.26 tripartite motif-containing 28 [Source:MGI Symbol;Acc:MGI:109274]
97. Ywhae ENSMUSG00000020849 81.25 844.26 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
98. Rpl8 ENSMUSG00000003970 79.22 823.17 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
99. Ago2 ENSMUSG00000036698 77.18 801.97 argonaute RISC catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:2446632]
100. Eef2 ENSMUSG00000034994 77.18 801.97 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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