Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Mouse_E10_5_slice_1, section s37.

Sample reads: 96,243. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Atp6 ENSMUSG00000064357 3738.39 38843.33 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
2. mt-Cytb ENSMUSG00000064370 3609.33 37502.35 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
3. mt-Rnr2 ENSMUSG00000064339 3227.95 33539.66 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
4. Ptma ENSMUSG00000026238 2115.72 21983.16 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
5. mt-Co2 ENSMUSG00000064354 1998.26 20762.70 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
6. mt-Nd1 ENSMUSG00000064341 1886.60 19602.51 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
7. mt-Co1 ENSMUSG00000064351 1595.12 16573.92 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
8. mt-Nd4 ENSMUSG00000064363 1255.80 13048.25 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
9. mt-Nd2 ENSMUSG00000064345 1222.45 12701.73 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. mt-Nd3 ENSMUSG00000064360 1071.63 11134.65 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
11. Actb ENSMUSG00000029580 893.27 9281.42 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
12. mt-Rnr1 ENSMUSG00000064337 843.97 8769.18 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
13. mt-Nd5 ENSMUSG00000064367 771.46 8015.77 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
14. Eef1a1 ENSMUSG00000037742 732.31 7608.99 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. Mdk ENSMUSG00000027239 559.74 5815.92 midkine [Source:MGI Symbol;Acc:MGI:96949]
16. mt-Co3 ENSMUSG00000064358 433.58 4505.07 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
17. H19 ENSMUSG00000000031 385.73 4007.89 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
18. Igf2 ENSMUSG00000048583 385.73 4007.89 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
19. Npm1 ENSMUSG00000057113 332.08 3450.44 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
20. Hbb-y ENSMUSG00000052187 258.12 2681.97 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
21. Rpsa ENSMUSG00000032518 253.77 2636.77 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
22. Gm13340 ENSMUSG00000083563 249.42 2591.57 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
23. Rpl23 ENSMUSG00000071415 230.57 2395.71 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
24. Tuba1b ENSMUSG00000023004 213.17 2214.92 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
25. Hsp90ab1 ENSMUSG00000023944 210.27 2184.79 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
26. Cfl1 ENSMUSG00000056201 207.37 2154.66 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
27. Rps3a1 ENSMUSG00000028081 204.47 2124.52 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
28. Gm10800 ENSMUSG00000075014 203.02 2109.46 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
29. Hmga2 ENSMUSG00000056758 203.02 2109.46 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
30. Nedd4 ENSMUSG00000032216 203.02 2109.46 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
31. Eef1b2 ENSMUSG00000025967 192.87 2003.99 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
32. Ybx1 ENSMUSG00000028639 191.41 1988.82 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
33. Rps20 ENSMUSG00000028234 179.81 1868.30 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
34. Eif4g2 ENSMUSG00000005610 171.11 1777.90 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
35. Peg3 ENSMUSG00000002265 169.66 1762.83 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
36. Chchd2 ENSMUSG00000070493 166.76 1732.70 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
37. Tpt1 ENSMUSG00000060126 165.31 1717.64 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
38. Eif5a ENSMUSG00000078812 162.41 1687.50 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
39. Rpl32 ENSMUSG00000057841 159.51 1657.37 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
40. Tubb5 ENSMUSG00000001525 159.51 1657.37 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
41. Rps4x ENSMUSG00000031320 158.06 1642.31 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
42. Rps26 ENSMUSG00000025362 150.81 1566.97 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
43. Ngfrap1 149.36 1551.91 nerve growth factor receptor (TNFRSF16) associated protein 1, transcript variant 1
44. Hnrnpc ENSMUSG00000060373 147.91 1536.84 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
45. Atp5g3 ENSMUSG00000018770 137.76 1431.38 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
46. Pbx1 ENSMUSG00000052534 137.76 1431.38 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
47. Ran ENSMUSG00000029430 137.76 1431.38 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
48. Rpl4 ENSMUSG00000032399 134.86 1401.25 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
49. Pkm ENSMUSG00000032294 133.41 1386.18 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
50. 2810417H13Rik 130.51 1356.05 RIKEN cDNA 2810417H13 gene
51. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 130.51 1356.05 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
52. Son ENSMUSG00000022961 129.06 1340.98 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
53. Hmgn1 ENSMUSG00000040681 127.61 1325.92 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
54. Set ENSMUSG00000054766 126.16 1310.85 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
55. Wbp5 126.16 1310.85 WW domain binding protein 5
56. Rps5 ENSMUSG00000012848 124.71 1295.79 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
57. Hsp90aa1 ENSMUSG00000021270 123.26 1280.72 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
58. Rpl37 ENSMUSG00000041841 123.26 1280.72 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
59. Pabpc1 ENSMUSG00000022283 121.81 1265.65 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
60. Gm17132 ENSMUSG00000061331 118.91 1235.52 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
61. Ywhab ENSMUSG00000018326 118.91 1235.52 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
62. Hnrnph1 ENSMUSG00000007850 117.46 1220.46 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
63. Rplp1 ENSMUSG00000007892 117.46 1220.46 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
64. Ubb ENSMUSG00000019505 117.46 1220.46 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
65. Pcbp1 ENSMUSG00000051695 116.01 1205.39 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
66. Rps9 ENSMUSG00000006333 116.01 1205.39 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
67. Meg3 ENSMUSG00000021268 113.11 1175.26 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
68. Crabp1 ENSMUSG00000032291 110.21 1145.12 cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
69. Rpl39-ps ENSMUSG00000036305 110.21 1145.12 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
70. Gm14586 ENSMUSG00000083621 107.31 1114.99 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
71. Rpl41 ENSMUSG00000093674 101.51 1054.73 ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1915195]
72. Serbp1 ENSMUSG00000036371 101.51 1054.73 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
73. Eef2 ENSMUSG00000034994 100.06 1039.66 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
74. Malat1 ENSMUSG00000092341 98.61 1024.60 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
75. Sub1 ENSMUSG00000022205 97.16 1009.53 SUB1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104811]
76. Marcksl1 ENSMUSG00000047945 95.71 994.46 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
77. H3f3b ENSMUSG00000016559 94.26 979.40 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
78. Hba-a1 ENSMUSG00000069919 92.81 964.33 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
79. Rpl13a ENSMUSG00000074129 92.81 964.33 ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
80. Rpl18a ENSMUSG00000045128 92.81 964.33 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
81. Sfrp1 ENSMUSG00000031548 92.81 964.33 secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
82. Tpm4 ENSMUSG00000031799 92.81 964.33 tropomyosin 4 [Source:MGI Symbol;Acc:MGI:2449202]
83. U2af2 ENSMUSG00000030435 89.91 934.20 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
84. Hnrnpa2b1 ENSMUSG00000004980 88.46 919.13 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
85. Rpl8 ENSMUSG00000003970 88.46 919.13 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
86. Rrm2 ENSMUSG00000020649 88.46 919.13 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
87. Tmsb4x ENSMUSG00000049775 88.46 919.13 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
88. Anp32b ENSMUSG00000028333 87.01 904.07 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
89. Gnb2l1 Gnb2l1 87.01 904.07
90. Col1a1 ENSMUSG00000001506 85.56 889.00 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
91. Marcks ENSMUSG00000069662 85.56 889.00 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
92. Ddx5 ENSMUSG00000020719 84.11 873.94 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]
93. Eef1g ENSMUSG00000071644 84.11 873.94 eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410]
94. Fkbp1a ENSMUSG00000032966 84.11 873.94 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
95. Rpl26 ENSMUSG00000060938 84.11 873.94 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
96. Rps8 ENSMUSG00000047675 84.11 873.94 ribosomal protein S8 [Source:MGI Symbol;Acc:MGI:98166]
97. Srsf3 ENSMUSG00000071172 84.11 873.94 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
98. Txn1 ENSMUSG00000028367 84.11 873.94 thioredoxin 1 [Source:MGI Symbol;Acc:MGI:98874]
99. Col3a1 ENSMUSG00000026043 82.66 858.87 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
100. Grb10 ENSMUSG00000020176 82.66 858.87 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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