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Experiment Mouse_E10_5_slice_1, section s19.

Sample reads: 96,239. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. mt-Rnr2 ENSMUSG00000064339 5497.99 57128.44 mitochondrially encoded 16S rRNA [Source:MGI Symbol;Acc:MGI:102492]
2. mt-Atp6 ENSMUSG00000064357 3036.10 31547.47 mitochondrially encoded ATP synthase 6 [Source:MGI Symbol;Acc:MGI:99927]
3. mt-Cytb ENSMUSG00000064370 2624.33 27268.85 mitochondrially encoded cytochrome b [Source:MGI Symbol;Acc:MGI:102501]
4. Ptma ENSMUSG00000026238 2030.58 21099.32 prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
5. mt-Nd1 ENSMUSG00000064341 1882.01 19555.57 mitochondrially encoded NADH dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:101787]
6. mt-Co2 ENSMUSG00000064354 1875.33 19486.15 mitochondrially encoded cytochrome c oxidase II [Source:MGI Symbol;Acc:MGI:102503]
7. mt-Rnr1 ENSMUSG00000064337 1437.34 14935.09 mitochondrially encoded 12S rRNA [Source:MGI Symbol;Acc:MGI:102493]
8. mt-Co1 ENSMUSG00000064351 1324.76 13765.30 mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:102504]
9. mt-Nd2 ENSMUSG00000064345 1185.45 12317.76 mitochondrially encoded NADH dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:102500]
10. mt-Nd4 ENSMUSG00000064363 1025.06 10651.18 mitochondrially encoded NADH dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:102498]
11. mt-Nd5 ENSMUSG00000064367 969.54 10074.28 mitochondrially encoded NADH dehydrogenase 5 [Source:MGI Symbol;Acc:MGI:102496]
12. mt-Nd3 ENSMUSG00000064360 788.58 8193.97 mitochondrially encoded NADH dehydrogenase 3 [Source:MGI Symbol;Acc:MGI:102499]
13. Actb ENSMUSG00000029580 753.11 7825.41 actin, beta [Source:MGI Symbol;Acc:MGI:87904]
14. Eef1a1 ENSMUSG00000037742 646.70 6719.72 eukaryotic translation elongation factor 1 alpha 1 [Source:MGI Symbol;Acc:MGI:1096881]
15. H19 ENSMUSG00000000031 483.74 5026.44 H19, imprinted maternally expressed transcript [Source:MGI Symbol;Acc:MGI:95891]
16. Rpsa ENSMUSG00000032518 449.30 4668.58 ribosomal protein SA [Source:MGI Symbol;Acc:MGI:105381]
17. mt-Co3 ENSMUSG00000064358 416.91 4332.02 mitochondrially encoded cytochrome c oxidase III [Source:MGI Symbol;Acc:MGI:102502]
18. Hbb-y ENSMUSG00000052187 404.06 4198.50 hemoglobin Y, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96027]
19. Igf2 ENSMUSG00000048583 385.04 4000.87 insulin-like growth factor 2 [Source:MGI Symbol;Acc:MGI:96434]
20. Npm1 ENSMUSG00000057113 366.02 3803.24 nucleophosmin 1 [Source:MGI Symbol;Acc:MGI:106184]
21. Mdk ENSMUSG00000027239 282.22 2932.49 midkine [Source:MGI Symbol;Acc:MGI:96949]
22. Nedd4 ENSMUSG00000032216 254.98 2649.44 neural precursor cell expressed, developmentally down-regulated 4 [Source:MGI Symbol;Acc:MGI:97297]
23. Hsp90ab1 ENSMUSG00000023944 240.59 2499.92 heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247]
24. Ybx1 ENSMUSG00000028639 187.64 1949.73 Y box protein 1 [Source:MGI Symbol;Acc:MGI:99146]
25. Gm13340 ENSMUSG00000083563 186.09 1933.62 predicted gene 13340 [Source:MGI Symbol;Acc:MGI:3650227]
26. Set ENSMUSG00000054766 184.55 1917.62 SET nuclear oncogene [Source:MGI Symbol;Acc:MGI:1860267]
27. Tmsb4x ENSMUSG00000049775 180.44 1874.91 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
28. Rpl23 ENSMUSG00000071415 176.84 1837.51 ribosomal protein L23 [Source:MGI Symbol;Acc:MGI:1929455]
29. Cfl1 ENSMUSG00000056201 173.24 1800.10 cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
30. Eif5a ENSMUSG00000078812 170.16 1768.10 eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
31. Malat1 ENSMUSG00000092341 170.16 1768.10 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1919539]
32. Eif4g2 ENSMUSG00000005610 169.64 1762.69 eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
33. Ran ENSMUSG00000029430 168.62 1752.09 RAN, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1333112]
34. Tuba1b ENSMUSG00000023004 167.07 1735.99 tubulin, alpha 1B [Source:MGI Symbol;Acc:MGI:107804]
35. Pkm ENSMUSG00000032294 162.45 1687.98 pyruvate kinase, muscle [Source:MGI Symbol;Acc:MGI:97591]
36. Rps3a1 ENSMUSG00000028081 162.45 1687.98 ribosomal protein S3A1 [Source:MGI Symbol;Acc:MGI:1202063]
37. Atp5g3 ENSMUSG00000018770 158.33 1645.17 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
38. Rps20 ENSMUSG00000028234 156.79 1629.17 ribosomal protein S20 [Source:MGI Symbol;Acc:MGI:1914677]
39. Hmga2 ENSMUSG00000056758 153.71 1597.17 high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
40. Rps26 ENSMUSG00000025362 153.71 1597.17 ribosomal protein S26 [Source:MGI Symbol;Acc:MGI:1351628]
41. 2810417H13Rik 148.05 1538.36 RIKEN cDNA 2810417H13 gene
42. Tpt1 ENSMUSG00000060126 146.51 1522.35 tumor protein, translationally-controlled 1 [Source:MGI Symbol;Acc:MGI:104890]
43. Hbb-bh1 ENSMUSG00000052217 143.43 1490.35 hemoglobin Z, beta-like embryonic chain [Source:MGI Symbol;Acc:MGI:96024]
44. Hnrnpc ENSMUSG00000060373 140.34 1458.24 heterogeneous nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:107795]
45. Eef1b2 ENSMUSG00000025967 138.29 1436.94 eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]
46. Pabpc1 ENSMUSG00000022283 138.29 1436.94 poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
47. Rplp1 ENSMUSG00000007892 138.29 1436.94 ribosomal protein, large, P1 [Source:MGI Symbol;Acc:MGI:1927099]
48. Hsp90aa1 ENSMUSG00000021270 137.26 1426.24 heat shock protein 90, alpha (cytosolic), class A member 1 [Source:MGI Symbol;Acc:MGI:96250]
49. Ubb ENSMUSG00000019505 136.23 1415.54 ubiquitin B [Source:MGI Symbol;Acc:MGI:98888]
50. Peg3 ENSMUSG00000002265 135.71 1410.13 paternally expressed 3 [Source:MGI Symbol;Acc:MGI:104748]
51. Pcbp1 ENSMUSG00000051695 135.20 1404.83 poly(rC) binding protein 1 [Source:MGI Symbol;Acc:MGI:1345635]
52. Rpl39-ps ENSMUSG00000036305 135.20 1404.83 ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
53. Rpl4 ENSMUSG00000032399 133.66 1388.83 ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:1915141]
54. Ywhab ENSMUSG00000018326 133.14 1383.43 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917]
55. Tubb5 ENSMUSG00000001525 132.63 1378.13 tubulin, beta 5 class I [Source:MGI Symbol;Acc:MGI:107812]
56. Son ENSMUSG00000022961 131.09 1362.13 Son DNA binding protein [Source:MGI Symbol;Acc:MGI:98353]
57. Chchd2 ENSMUSG00000070493 130.57 1356.73 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428]
58. Hnrnpu ENSMUSG00000039630, ENSMUSG00000111145 119.26 1239.21 heterogeneous nuclear ribonucleoprotein U [Source:MGI Symbol;Acc:MGI:1858195]
59. Rps4x ENSMUSG00000031320 117.72 1223.20 ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
60. Hmgn1 ENSMUSG00000040681 117.21 1217.90 high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
61. Gm10800 ENSMUSG00000075014 113.10 1175.20 predicted gene 10800 [Source:MGI Symbol;Acc:MGI:3641657]
62. Ccnd2 ENSMUSG00000000184 112.07 1164.50 cyclin D2 [Source:MGI Symbol;Acc:MGI:88314]
63. Rpl32 ENSMUSG00000057841 105.90 1100.38 ribosomal protein L32 [Source:MGI Symbol;Acc:MGI:98038]
64. Marcks ENSMUSG00000069662 105.38 1094.98 myristoylated alanine rich protein kinase C substrate [Source:MGI Symbol;Acc:MGI:96907]
65. Gm14586 ENSMUSG00000083621 104.87 1089.68 predicted gene 14586 [Source:MGI Symbol;Acc:MGI:3705507]
66. Serbp1 ENSMUSG00000036371 102.81 1068.28 serpine1 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1914120]
67. Grb10 ENSMUSG00000020176 102.30 1062.98 growth factor receptor bound protein 10 [Source:MGI Symbol;Acc:MGI:103232]
68. Hnrnpa2b1 ENSMUSG00000004980 101.79 1057.68 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:MGI Symbol;Acc:MGI:104819]
69. Pbx1 ENSMUSG00000052534 101.79 1057.68 pre B cell leukemia homeobox 1 [Source:MGI Symbol;Acc:MGI:97495]
70. Rpl37 ENSMUSG00000041841 100.24 1041.57 ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1914531]
71. Anp32b ENSMUSG00000028333 99.73 1036.27 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:MGI Symbol;Acc:MGI:1914878]
72. Hba-x ENSMUSG00000055609 98.19 1020.27 hemoglobin X, alpha-like embryonic chain in Hba complex [Source:MGI Symbol;Acc:MGI:96019]
73. Rps5 ENSMUSG00000012848 94.07 977.46 ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682]
74. Rpl18a ENSMUSG00000045128 93.56 972.16 ribosomal protein L18A [Source:MGI Symbol;Acc:MGI:1924058]
75. Paics ENSMUSG00000029247 91.50 950.76 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase [Source:MGI Symbol;Acc:MGI:1914304]
76. Sf1 ENSMUSG00000024949, ENSMUSG00000106722 91.50 950.76 splicing factor 1 [Source:MGI Symbol;Acc:MGI:1095403]
77. H3f3b ENSMUSG00000016559 90.99 945.46 H3 histone, family 3B [Source:MGI Symbol;Acc:MGI:1101768]
78. Ywhae ENSMUSG00000020849 89.96 934.76 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:894689]
79. Ldha ENSMUSG00000063229 88.93 924.05 lactate dehydrogenase A [Source:MGI Symbol;Acc:MGI:96759]
80. Gm17132 ENSMUSG00000061331 87.91 913.45 predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
81. Cdkn1c ENSMUSG00000037664 87.39 908.05 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
82. Rrm2 ENSMUSG00000020649 86.88 902.75 ribonucleotide reductase M2 [Source:MGI Symbol;Acc:MGI:98181]
83. Tuba1a ENSMUSG00000072235 86.88 902.75 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
84. Top1 ENSMUSG00000070544 86.36 897.35 topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
85. Marcksl1 ENSMUSG00000047945 85.85 892.05 MARCKS-like 1 [Source:MGI Symbol;Acc:MGI:97143]
86. Rpl26 ENSMUSG00000060938 85.85 892.05 ribosomal protein L26 [Source:MGI Symbol;Acc:MGI:106022]
87. Rpl8 ENSMUSG00000003970 85.85 892.05 ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927]
88. Eef2 ENSMUSG00000034994 84.31 876.05 eukaryotic translation elongation factor 2 [Source:MGI Symbol;Acc:MGI:95288]
89. Hnrnph1 ENSMUSG00000007850 84.31 876.05 heterogeneous nuclear ribonucleoprotein H1 [Source:MGI Symbol;Acc:MGI:1891925]
90. Rpl13a ENSMUSG00000074129 83.79 870.64 ribosomal protein L13A [Source:MGI Symbol;Acc:MGI:1351455]
91. Rps9 ENSMUSG00000006333 82.77 860.05 ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
92. Fkbp1a ENSMUSG00000032966 81.74 849.34 FK506 binding protein 1a [Source:MGI Symbol;Acc:MGI:95541]
93. Hba-a1 ENSMUSG00000069919 81.74 849.34 hemoglobin alpha, adult chain 1 [Source:MGI Symbol;Acc:MGI:96015]
94. Gm14303 ENSMUSG00000081344 80.71 838.64 predicted gene 14303 [Source:MGI Symbol;Acc:MGI:3651379]
95. Rbm25 ENSMUSG00000010608 80.20 833.34 RNA binding motif protein 25 [Source:MGI Symbol;Acc:MGI:1914289]
96. Caprin1 ENSMUSG00000027184 79.68 827.94 cell cycle associated protein 1 [Source:MGI Symbol;Acc:MGI:1858234]
97. Srsf3 ENSMUSG00000071172 79.68 827.94 serine/arginine-rich splicing factor 3 [Source:MGI Symbol;Acc:MGI:98285]
98. Txn1 ENSMUSG00000028367 79.68 827.94 thioredoxin 1 [Source:MGI Symbol;Acc:MGI:98874]
99. Ddx3x ENSMUSG00000000787 79.17 822.64 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
100. Cox8a ENSMUSG00000035885 78.14 811.94 cytochrome c oxidase subunit 8A [Source:MGI Symbol;Acc:MGI:105959]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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