Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s97.

Sample reads: 391,648. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 11877.75 30327.78 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 7437.00 18989.10 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPS27 ENSG00000177954 5154.84 13161.99 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. SFRP1 ENSG00000104332 3804.81 9714.93 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
5. MTRNR2L8 ENSG00000255823 2979.89 7608.63 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
6. RPS12 ENSG00000112306 2950.81 7534.38 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
7. HIST1H4C ENSG00000197061 2651.01 6768.90 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
8. MTRNR2L1 ENSG00000256618 2518.37 6430.22 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
9. PPIA ENSG00000196262 2294.88 5859.58 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
10. ACTB ENSG00000075624 2218.56 5664.71 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
11. TUBA1B ENSG00000123416 2145.88 5479.13 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
12. COL3A1 ENSG00000168542 1996.89 5098.71 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
13. RPL10A ENSG00000198755 1947.83 4973.45 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
14. RPL15 ENSG00000174748 1909.67 4876.01 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
15. RPL31 ENSG00000071082 1906.04 4866.74 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
16. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 1860.61 4750.75 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
17. RPL37 ENSG00000145592 1678.91 4286.81 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
18. RPS20 ENSG00000008988 1633.49 4170.83 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
19. ACTG1 ENSG00000184009 1617.13 4129.06 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
20. RPL23 ENSG00000125691 1531.73 3911.01 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
21. GNAS ENSG00000087460 1524.47 3892.47 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
22. PTMA ENSG00000187514 1522.65 3887.82 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
23. RPS29 ENSG00000213741 1520.83 3883.18 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
24. RPL5 ENSG00000122406 1506.30 3846.08 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
25. RPS23 ENSG00000186468 1488.13 3799.68 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
26. HNRNPC ENSG00000092199 1484.49 3790.39 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
27. MALAT1 ENSG00000251562 1482.67 3785.74 metastasis associated lung adenocarcinoma transcript 1 [Source:HGNC Symbol;Acc:HGNC:29665]
28. TPT1 ENSG00000133112 1459.05 3725.43 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
29. RPL34 ENSG00000109475 1435.43 3665.12 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
30. RPL11 ENSG00000142676 1415.45 3614.11 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
31. RPS15A ENSG00000134419 1408.18 3595.54 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
32. RPS3A ENSG00000145425 1384.56 3535.23 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
33. MTRNR2L2 ENSG00000271043 1328.23 3391.41 MT-RNR2 like 2 [Source:HGNC Symbol;Acc:HGNC:37156]
34. TMSB4X ENSG00000205542 1266.45 3233.66 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
35. RPS6 ENSG00000137154 1224.66 3126.96 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
36. RPS27A ENSG00000143947 1108.37 2830.03 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
37. NPM1 ENSG00000181163 1068.40 2727.97 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
38. RPL10 ENSG00000147403 1064.76 2718.68 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
39. HMGB1 ENSG00000189403 1057.50 2700.14 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
40. RPL35 ENSG00000136942 1052.04 2686.20 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
41. RPS13 ENSG00000110700 1001.17 2556.31 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
42. RPL30 ENSG00000156482 963.01 2458.88 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
43. RPS16 ENSG00000105193 961.19 2454.23 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
44. H2AFZ ENSG00000164032 950.29 2426.40 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
45. NGFRAP1 NGFRAP1 923.04 2356.82
46. RPLP0 ENSG00000089157 910.32 2324.34 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
47. RPL22 ENSG00000116251 853.99 2180.52 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
48. RPS8 ENSG00000142937 830.37 2120.21 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
49. MYL6 ENSG00000092841 815.83 2083.08 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
50. RPS7 ENSG00000171863 814.02 2078.46 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
51. RPL9 ENSG00000163682 803.12 2050.63 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
52. EIF4G2 ENSG00000110321 797.66 2036.69 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
53. MDK ENSG00000110492 794.03 2027.42 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
54. RPL26 ENSG00000161970 794.03 2027.42 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
55. RPS11 ENSG00000142534 772.23 1971.76 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
56. SERF2 ENSG00000140264 772.23 1971.76 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
57. RPL27A ENSG00000166441 763.14 1948.55 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
58. HMGN1 ENSG00000205581 744.97 1902.15 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
59. TOMM6 ENSG00000214736 723.17 1846.49 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
60. RPL13AP20 ENSG00000234498 715.90 1827.93 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
61. SRP14 ENSG00000140319 706.81 1804.72 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
62. MORF4L1 ENSG00000185787 685.01 1749.05 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
63. RPL7A ENSG00000148303, ENSG00000280858 666.84 1702.66 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
64. NUCKS1 ENSG00000069275 648.67 1656.27 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
65. COX7A2 ENSG00000112695 645.04 1647.00 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
66. RPL32 ENSG00000144713 639.59 1633.08 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
67. HSPA8 ENSG00000109971 626.87 1600.60 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
68. RPS28 ENSG00000233927 605.06 1544.92 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
69. RPS5 ENSG00000083845 603.25 1540.29 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
70. HNRNPA1L2 ENSG00000139675 590.53 1507.82 heterogeneous nuclear ribonucleoprotein A1-like 2 [Source:HGNC Symbol;Acc:HGNC:27067]
71. STMN1 ENSG00000117632 586.89 1498.52 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
72. RPS24 ENSG00000138326 575.99 1470.69 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
73. KCNQ1OT1 ENSG00000269821 566.91 1447.51 KCNQ1 opposite strand/antisense transcript 1 [Source:HGNC Symbol;Acc:HGNC:6295]
74. RPS25 ENSG00000118181, ENSG00000280831 565.09 1442.86 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
75. HNRNPK ENSG00000165119 559.64 1428.94 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
76. HMGA2 ENSG00000149948 557.82 1424.30 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
77. HSP90AB1 ENSG00000096384 554.19 1415.03 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
78. SUMO2 ENSG00000188612 546.92 1396.47 small ubiquitin-like modifier 2 [Source:HGNC Symbol;Acc:HGNC:11125]
79. RPL13 ENSG00000167526 528.75 1350.07 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
80. FAU ENSG00000149806 521.48 1331.51 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
81. HNRNPD ENSG00000138668 516.03 1317.59 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
82. RPL6 ENSG00000089009 516.03 1317.59 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
83. RPL35A ENSG00000182899 512.39 1308.30 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
84. RPS21 ENSG00000171858 505.13 1289.76 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
85. YWHAZ ENSG00000164924 505.13 1289.76 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:HGNC Symbol;Acc:HGNC:12855]
86. RPL39 ENSG00000198918 497.86 1271.20 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
87. RPS14 ENSG00000164587 492.41 1257.28 ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387]
88. TMEM258 ENSG00000134825 490.59 1252.64 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
89. CCND2 ENSG00000118971 485.14 1238.72 cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]
90. HNRNPA1 ENSG00000135486 485.14 1238.72 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
91. PFN1 ENSG00000108518 485.14 1238.72 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
92. RPL7 ENSG00000147604 485.14 1238.72 ribosomal protein L7 [Source:HGNC Symbol;Acc:HGNC:10363]
93. UBA52 ENSG00000221983 485.14 1238.72 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
94. UBB ENSG00000170315 481.51 1229.45 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
95. CBX3 ENSG00000122565 479.69 1224.81 chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]
96. RPLP1 ENSG00000137818 479.69 1224.81 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
97. RPL18A ENSG00000105640 476.05 1215.51 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
98. RPL23A ENSG00000198242 474.24 1210.89 ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
99. XRCC5 ENSG00000079246 466.97 1192.33 X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
100. ATP5G2 452.43 1155.20 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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