Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Experiment Human_35d_slice2, section s95.

Sample reads: 391,641. Showing entries 1-100.

No. Gene Name Gene ID Counts CPM Annotation
1. RPL41 ENSG00000229117 10592.79 27047.18 ribosomal protein L41 [Source:HGNC Symbol;Acc:HGNC:10354]
2. EEF1A1 ENSG00000156508 6658.97 17002.73 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:HGNC:3189]
3. RPS27 ENSG00000177954 4444.20 11347.63 ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]
4. RPS12 ENSG00000112306 3849.22 9828.44 ribosomal protein S12 [Source:HGNC Symbol;Acc:HGNC:10385]
5. TUBA1B ENSG00000123416 3682.89 9403.74 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
6. PPIA ENSG00000196262 3287.60 8394.42 peptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]
7. PTMA ENSG00000187514 2763.80 7056.97 prothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]
8. ACTB ENSG00000075624 2476.68 6323.85 actin beta [Source:HGNC Symbol;Acc:HGNC:132]
9. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 2377.45 6070.48 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
10. HIST1H4C ENSG00000197061 2331.50 5953.15 histone cluster 1 H4 family member c [Source:HGNC Symbol;Acc:HGNC:4787]
11. RPL31 ENSG00000071082 2174.52 5552.33 ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]
12. RPL10A ENSG00000198755 2102.53 5368.51 ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
13. RPS20 ENSG00000008988 1981.75 5060.12 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
14. RPL37 ENSG00000145592 1935.80 4942.79 ribosomal protein L37 [Source:HGNC Symbol;Acc:HGNC:10347]
15. RPL11 ENSG00000142676 1890.25 4826.48 ribosomal protein L11 [Source:HGNC Symbol;Acc:HGNC:10301]
16. RPS6 ENSG00000137154 1834.94 4685.26 ribosomal protein S6 [Source:HGNC Symbol;Acc:HGNC:10429]
17. RPS23 ENSG00000186468 1828.03 4667.61 ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]
18. RPL5 ENSG00000122406 1825.18 4660.34 ribosomal protein L5 [Source:HGNC Symbol;Acc:HGNC:10360]
19. RPL15 ENSG00000174748 1788.58 4566.88 ribosomal protein L15 [Source:HGNC Symbol;Acc:HGNC:10306]
20. RPS15A ENSG00000134419 1679.59 4288.59 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
21. MDK ENSG00000110492 1678.77 4286.50 midkine [Source:HGNC Symbol;Acc:HGNC:6972]
22. GNAS ENSG00000087460 1616.15 4126.61 GNAS complex locus [Source:HGNC Symbol;Acc:HGNC:4392]
23. ACTG1 ENSG00000184009 1567.34 4001.98 actin gamma 1 [Source:HGNC Symbol;Acc:HGNC:144]
24. HNRNPC ENSG00000092199 1545.38 3945.91 heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:HGNC:5035]
25. MTRNR2L1 ENSG00000256618 1485.60 3793.27 MT-RNR2 like 1 [Source:HGNC Symbol;Acc:HGNC:37155]
26. RPL35 ENSG00000136942 1482.75 3785.99 ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:10344]
27. HSP90AB1 ENSG00000096384 1453.07 3710.21 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
28. RPL23 ENSG00000125691 1448.59 3698.77 ribosomal protein L23 [Source:HGNC Symbol;Acc:HGNC:10316]
29. RPL34 ENSG00000109475 1431.11 3654.14 ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]
30. MTRNR2L8 ENSG00000255823 1385.56 3537.83 MT-RNR2 like 8 [Source:HGNC Symbol;Acc:HGNC:37165]
31. RPS3A ENSG00000145425 1328.62 3392.44 ribosomal protein S3A [Source:HGNC Symbol;Acc:HGNC:10421]
32. SFRP1 ENSG00000104332 1328.62 3392.44 secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
33. RPS13 ENSG00000110700 1289.58 3292.76 ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
34. RPS27A ENSG00000143947 1264.77 3229.41 ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417]
35. RPS16 ENSG00000105193 1257.86 3211.77 ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
36. RPS5 ENSG00000083845 1240.37 3167.11 ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426]
37. HMGA2 ENSG00000149948 1237.53 3159.86 high mobility group AT-hook 2 [Source:HGNC Symbol;Acc:HGNC:5009]
38. TPT1 ENSG00000133112 1235.49 3154.65 tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:HGNC:12022]
39. RPL10 ENSG00000147403 1211.09 3092.35 ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:10298]
40. RPS11 ENSG00000142534 1161.88 2966.70 ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:10384]
41. H2AFZ ENSG00000164032 1109.42 2832.75 H2A histone family member Z [Source:HGNC Symbol;Acc:HGNC:4741]
42. NPM1 ENSG00000181163 1098.04 2803.69 nucleophosmin 1 [Source:HGNC Symbol;Acc:HGNC:7910]
43. RPL18A ENSG00000105640 1080.95 2760.05 ribosomal protein L18a [Source:HGNC Symbol;Acc:HGNC:10311]
44. UBB ENSG00000170315 1067.13 2724.76 ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]
45. GAPDH ENSG00000111640 1041.10 2658.30 glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]
46. RPLP0 ENSG00000089157 999.21 2551.34 ribosomal protein lateral stalk subunit P0 [Source:HGNC Symbol;Acc:HGNC:10371]
47. HMGB1 ENSG00000189403 980.10 2502.55 high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]
48. RPS8 ENSG00000142937 974.00 2486.97 ribosomal protein S8 [Source:HGNC Symbol;Acc:HGNC:10441]
49. RPL7A ENSG00000148303, ENSG00000280858 960.17 2451.66 ribosomal protein L7a [Source:HGNC Symbol;Acc:HGNC:10364]
50. HMGN1 ENSG00000205581 947.97 2420.51 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
51. STMN1 ENSG00000117632 947.97 2420.51 stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]
52. RPL13 ENSG00000167526 911.37 2327.05 ribosomal protein L13 [Source:HGNC Symbol;Acc:HGNC:10303]
53. PFN1 ENSG00000108518 903.24 2306.29 profilin 1 [Source:HGNC Symbol;Acc:HGNC:8881]
54. UBA52 ENSG00000221983 897.14 2290.72 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458]
55. RPL30 ENSG00000156482 874.77 2233.60 ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:10333]
56. RPS29 ENSG00000213741 858.50 2192.06 ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]
57. RPS28 ENSG00000233927 841.83 2149.49 ribosomal protein S28 [Source:HGNC Symbol;Acc:HGNC:10418]
58. RPS2 ENSG00000140988 819.05 2091.33 ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:10404]
59. RPL26 ENSG00000161970 808.07 2063.29 ribosomal protein L26 [Source:HGNC Symbol;Acc:HGNC:10327]
60. EIF4G2 ENSG00000110321 797.91 2037.35 eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]
61. RPL9 ENSG00000163682 790.99 2019.68 ribosomal protein L9 [Source:HGNC Symbol;Acc:HGNC:10369]
62. COL3A1 ENSG00000168542 776.76 1983.35 collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
63. RPL22 ENSG00000116251 773.91 1976.07 ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315]
64. MYL6 ENSG00000092841 771.47 1969.84 myosin light chain 6 [Source:HGNC Symbol;Acc:HGNC:7587]
65. NGFRAP1 NGFRAP1 758.05 1935.57
66. TMEM258 ENSG00000134825 757.64 1934.53 transmembrane protein 258 [Source:HGNC Symbol;Acc:HGNC:1164]
67. TOMM6 ENSG00000214736 755.61 1929.34 translocase of outer mitochondrial membrane 6 [Source:HGNC Symbol;Acc:HGNC:34528]
68. RPL13AP20 ENSG00000234498 751.54 1918.95 ribosomal protein L13a pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:35709]
69. RPL27A ENSG00000166441 738.12 1884.68 ribosomal protein L27a [Source:HGNC Symbol;Acc:HGNC:10329]
70. HNRNPD ENSG00000138668 736.09 1879.50 heterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]
71. COX7A2 ENSG00000112695 725.52 1852.51 cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]
72. RPS25 ENSG00000118181, ENSG00000280831 719.82 1837.96 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
73. SRP14 ENSG00000140319 716.57 1829.66 signal recognition particle 14 [Source:HGNC Symbol;Acc:HGNC:11299]
74. SERF2 ENSG00000140264 696.24 1777.75 small EDRK-rich factor 2 [Source:HGNC Symbol;Acc:HGNC:10757]
75. RPL32 ENSG00000144713 695.02 1774.63 ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:10336]
76. NUCKS1 ENSG00000069275 693.39 1770.47 nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]
77. CFL1 ENSG00000172757 666.55 1701.94 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
78. RPS21 ENSG00000171858 655.57 1673.90 ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
79. FAU ENSG00000149806 638.89 1631.31 FAU, ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597]
80. ATP5G2 638.08 1629.25 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C2 (subunit 9), transcript variant X3
81. HNRNPA1 ENSG00000135486 623.44 1591.87 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]
82. TMSB4X ENSG00000205542 623.44 1591.87 thymosin beta 4 X-linked [Source:HGNC Symbol;Acc:HGNC:11881]
83. HNRNPK ENSG00000165119 622.22 1588.75 heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:HGNC:5044]
84. RPL6 ENSG00000089009 620.19 1583.57 ribosomal protein L6 [Source:HGNC Symbol;Acc:HGNC:10362]
85. SRSF2 ENSG00000161547 616.12 1573.17 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
86. RPL4 ENSG00000174444 609.61 1556.55 ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:10353]
87. RPLP1 ENSG00000137818 609.61 1556.55 ribosomal protein lateral stalk subunit P1 [Source:HGNC Symbol;Acc:HGNC:10372]
88. HSPA8 ENSG00000109971 593.75 1516.06 heat shock protein family A (Hsp70) member 8 [Source:HGNC Symbol;Acc:HGNC:5241]
89. XRCC5 ENSG00000079246 584.81 1493.23 X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
90. RPS7 ENSG00000171863 578.30 1476.61 ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
91. SET ENSG00000119335 577.08 1473.49 SET nuclear proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10760]
92. RPL35A ENSG00000182899 574.64 1467.26 ribosomal protein L35a [Source:HGNC Symbol;Acc:HGNC:10345]
93. MORF4L1 ENSG00000185787 574.23 1466.21 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:HGNC:16989]
94. IFITM2 ENSG00000185201 573.83 1465.19 interferon induced transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:5413]
95. PGAM1 ENSG00000171314 572.20 1461.03 phosphoglycerate mutase 1 [Source:HGNC Symbol;Acc:HGNC:8888]
96. TUBA1A ENSG00000167552 564.88 1442.34 tubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]
97. RPL39 ENSG00000198918 560.00 1429.88 ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]
98. YWHAZ ENSG00000164924 560.00 1429.88 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:HGNC Symbol;Acc:HGNC:12855]
99. RPL3 ENSG00000100316 529.90 1353.02 ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]
100. RPS24 ENSG00000138326 526.65 1344.73 ribosomal protein S24 [Source:HGNC Symbol;Acc:HGNC:10411]
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Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA